Web notes  

March 2018

[Pathology archives]

1. Baena-Del Valle JA, Zheng Q, Esopi DM, Rubenstein M, Hubbard GK, Moncaliano MC, Hruszkewycz A, Vaghasia A, Yegnasubramanian S, Wheelan SJ, Meeker AK, Heaphy CM, Graham MK, De Marzo AM. MYC drives overexpression of telomerase RNA (hTR/TERC) in prostate cancer. J Pathol. 2018 Jan;244(1):11-24.
Key words: MYC, RNA in situ hybridization, TERC telomerase RNA component, prostate carcinoma, telomerase
PMID: 28888037

2. Chen W, Wang S, Mestre AA, Fu C, Makarem A, Xian F, Hayes LR, Lopez-Gonzalez R, Drenner K, Jiang J, Cleveland DW, Sun S. C9ORF72 GGGGCC repeat-associated non-AUG translation is upregulated by stress through eIF2? phosphorylation. Nat Communications. 2018 Jan;9;Article number 51 - Open Access
Key words: hexanucleotide, amyotrophic lateral sclerosis,
PMID: 29302060

3. Dezern AE, Borowitz MJ. ICCS/ESCCA consensus guidelines to detect GPI-deficient cells in paroxysmal nocturnal hemoglobinuria (PNH) and related disorders part 1 - clinical utility. Cytometry B Clin Cytom. 2018 Jan;94(1):16-22.
Key words: complement inhibitors; aplastic anemia; paroxysmal nocturnal hemoglobinuria
PMID: 29236352

4. Epstein JI. Prostate cancer grading: A decade after the 2005 modified system. Mod Pathol. 2018 Jan;31:S47-63
Key words: Prostate adenocarcinoma, Gleason grading, prostate cancer
PMID: 29297487

5. Grabowski MK, Reynolds SJ, Kagaayi J, Gray RH, Clarke W, Nakigozi G, Laeyndecker O, Redd AD, Billioux V, Ssekubugu R, Nalugoda F, Wawer MJ, Serwadda D, Quinn TC, Tobian AAR. The validity of self-reported antiretroviral use in persons living with HIV: a population-based study. AIDS. 2018 Jan;32(3):363-9.
Key words: antiretroviral, HIV, self-reporting
PMID: 29194115

6. Hata T, Dal Molin M, McGregor-Das A, Song TJ, Wolfgang C, Eshleman JR, Hruban RH, Goggins M. Simple detection of telomere fusions in pancreatic cancer, intraductal papillary mucinous neoplasm, and pancreatic cyst fluid. J Mol Diagn. 2018 Jan;20(1):46-55.
Key words: telomere, pancreatic cancer, neoplasm, pancreatic cyst fluid
PMID: 29229290

7. Hooper JE, Richardson H, Maters AW, Carroll KC, Pronovost PJ. The Association of Departmental Quality Infrastructure and Positive Change: A Pathology Department Illustration. Acad Pathol. 2018 Jan 18;5: 2374289517744753. eCollection
Key words: quality improvement, infrastructure, pathology, laboratory; patient safety; quality assurance https://www.ncbi.nlm.nih.gov/pmc/articles/PMC5777549/
PMID: 29376115

8. Hui Y, Lombardo KA, Quddus MR, Matoso A. Cell polarity reversal distinguishes true micropapillary growth from retraction artifact in invasive urothelial carcinoma. Appl Immunohistochem Mol Morphol. 2018 Jan;26(1):e1-e6.
Key words: urothelial carcinoma, micropapillary, EMA, E-cadherin
PMID: 28800010

9. Nguyen D, Haley L, Pallavajjala A, Gojo I, Ning Y. Identification of a novel KMT2A-SEPT14 fusion in acute myeloid leukemia. Leuk Lymphoma. 2018 Jan;59(1):265-7. (Letter to Editor)
Key words: leukemia, gene fusion
PMID: 28573893

10. Patel HD, Tosoian JJ, Carter HC, Epstein JI. Adverse pathologic findings at radical prostatectomy: Is there a favorable intermediate-risk group? JAMA Oncology. 2018 Jan 4:89-92.
Key words: active surveillance, prostate adenocarcinoma, Gleason grading
No PMID available

11. Sfanos KS, Yegnasubramanian S, Nelson WG, DeMarzo AM. The inflammatory microenvironment and microbiome in prostate cancer development. Nat Rev Urol. 2018 Jan;15(1):11-24.
Key words: chronic inflammation, prostate cancer, prostatic diseases, urinary tract infection
PMID: 29089606

12. Shen J, Chen X, Jia H, Meyers CA, Shrestha S, Asatrian G, Ding C, Tsuei R, Zhang X, Peault B, Ting K, Soo C, James AW. Effects of WNT3A and WNT16 on the osteogenic and adipogenic differentiation of perivascular stem/stromal cells. Tissue Eng Part A. 2018 Jan;24(1-2):68-80.
Key words: Mesenchymal stem cell, perivascular stem cell, bone tissue engineering, adipose tissue engineering, Wnt signaling
PMID: 28463594

13. Shrestha E, White JR, Yu SH, Kulac I, Ertunc O, De Marzo AM, Yegnasubramanian S, Mangold LA, Partin AW, Sfanos KS. Profiling the urinary microbiome in men with positive versus negative biopsies for prostate cancer. J Urol. 2018 Jan;199(1):161-71.
Key words: bacteria, inflammation, microbiota, prostatic neoplasms, urinary tract
PMID: 28797714

14. Tosoian JJ, Alam R, Ball MW, Carter HB, Epstein JI. Managing high-grade prostatic intraepithelial neoplasia (HGPIN) and atypical glands on prostate biopsy. Nat Rev Urol. 2018 Jan;15(1):55-66.
Key words: prostate needle biopsy, high grade prostatic intraepithelial neoplasia, prostate adenocarcinoma

PMID: 28858331

15. Ware AD, Jacquot C, Tobian AAR, Gehrie EA, Ness PM, Bloch EM. Pathogen reduction and blood transfusion safety in Africa: strengths, limitations and challenges of implementation in low-resource settings. Vox Sang. 2018 Jan;113(1):3-12.
Key words: Africa; blood transfusion, pathogen reduction, transfusion-transmitted infections
PMID: 29193128


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March 2018 articles:
Training Sessions: Relying on an External IRB (JHM IRB)
Fee Schedule Adjustment for Hospital Services Charged to Clinical Trial Budgets
Change in Federalwide Assurance [FWA] Numbers
Changes to NIH-funded Human Subjects Research
Free Resources for Longitudinal Clinical Research Studies
NIH requirement for Single IRB (sIRB)
JHM IRB Reliance Requests
Sharing Partnership for Innovative Research in Translation
Johns Hopkins Institute for Clinical and Translational Research
Johns Hopkins Research Network
Visit Animal Care and Use Committee Website
Current Classes
"Interinstitutional Assurance" Agreement
Health, Safety, and Environment (HSE) presents: Safety in Research Updates
Johns Hopkins Catalyst and Discovery Awards
Foundation for the NIH Trailblazer Prize for Clinician-Scientists
NIH Shared Instrumentation Grant (SIG) Program
NIH High-End Instrumentation Grant (HEI) Program
Shared Instrumentation for Animal Research (SIFAR) Grant Program
Michael J. Fox Foundation (MJFF) Challenge
Why Project Outcomes Matter in your Interim and Final Research Performance Progress Report (RPPR)
NIH Matchmaker, A Tool For Finding Similar NIH Projects
NIH Video Tutorials on How to Apply for Grants
NIH Policy: Foreign Components Added to a Grant to a Domestic or Foreign Organization

This Month's Departmental Listings

Upcoming Deadlines for March, April and May

March Events at the Genetic Resources Core Facility


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