September 2014

Pathology Archives

1. Ahsan S, Raabe EH, Haffner MC, Vaghasia A, Warren KE, Quezado M, Ballester LY, Nazarian J, Eberhart CG, Rodriguez FJ. Increased 5-hydroxymethylcytosine and decreased 5-methylcytosine are indicators of global epigenetic dysregulation in diffuse intrinsic pontine glioma. Acta Neuropathol Commun. 2014 Jun 3;2(1):59.
Key words: hydroxymethylcytosine, glioma
PMID: 24894482

2. Cousins MM, Konikoff J, Sabin D, Khaki L, Longosz AF, Laeyendecker O, Celum C, Buchbinder SP, Seage GR III, Kirk GD, Moore RD, Mehta SH, Margolick JB, Brown J, Mayer KH, Wheeler D, Justman JE, Hodder SL, Quinn TC, Brookmeyer R, Eshleman SH. A comparison of two measures of HIV diversity in multi-assay algorithms for HIV incidence estimation. PLoS One. 2014 Jun 26;9(6):e101043.
Key words: HIV, diversity, incidence, high resolution melting

3. Ellis CL, Eble JN, Subhawong AP, Martignoni G, Zhong M, Ladanyi M, Epstein JI, Netto GJ, Argani P.
Clinical heterogeneity of Xp11 translocation renal cell carcinoma: impact of fusion subtype, age, and stage. Mod Pathol. 2014 Jun;27(6):875-86.
Key words: renal, carcinoma, translocation, TFE3

4. Epstein JI, Amin MB, Beltran H, Lotan TL, Mosquera JM, Reuter VE, Robinson BD, Troncoso P, Rubin MA. Proposed morphologic classification of prostate cancer with neuroendocrine differentiation. Am J Surg Pathol. 2014 Jun;38(6):756-67.
Key words: small cell carcinoma, prostate adenocarcinoma, carcinoid tumor, large cell neuroendocrine carcinoma

5. Grabowski MK, Gray RH, Serwadda D, Kigozi G, Gravitt PE, Nalugoda F, Reynolds SJ, Wawer MJ, Watya S, Quinn TC, Tobian AAR. High risk human papillomavirus viral load and persistence among HIV-negative and HIV-positive men. Sex Transm Infect. 2014 Jun;90(4):337-43.
Key words: HIV, papillomavirus

6. Lin MT, Mosier SL, Thiess M, Beierl KF, Debeljak M, Tseng LH, Chen G, Yegnasubramanian S, Ho H, Cope L, Wheelan SJ, Gocke CD, Eshleman JR. Clinical validation of KRAS, BRAF and EGFR mutation detection using next generation sequencing. Am J Clin Pathol. 2014 June;141(6):856-66.
Key words: deamination, KRAS, BRAF, EGFR, mutation, next-generation sequencing, read depth, validation

7. Maniar KP, Wang Y, Visvanathan K, Shih IM, Kurman RJ. Evaluation of microinvasion and lymph node involvement in ovarian serous borderline/atypical proliferative serous tumors: a morphologic and immunohistochemical analysis of 37 cases. Am J Surg Pathol. 2014 Jun;38(6):743-55.
Key words: microinvasion, lymph node, ovarian tumor, immunohistochemical analysis

8. Marzinke MA, Breaud A, Parsons TL, Cohen MS, Piwowar-Manning E, Eshleman SH, Clarke W. The development and validation of a method using high-resolution mass spectrometry (HRMS) for the qualitative detection of antiretroviral agents in human blood. Clin Chim Acta 2014 Jun 10;433:157-68.
Key words: Antiretroviral; Clinical trials; Exactive-MS; High-resolution mass spectrometry; Validation

9. Munari E, Marchionni L, Chitre A, Hayashi M, Martignoni G, Brunelli M, Gobbo S, Argani P, Allaf M, Hoque MO, Netto GJ. Clear cell papillary renal cell carcinoma: micro-RNA expression profiling and comparison with clear cell renal cell carcinoma and papillary renal cell carcinoma. Hum Pathol .2014
Key words: Clear cell papillary renal cell carcinoma; Micro-RNA; Profiling; Renal cancer
PMID: 24703100

10. Riedel S, Neoh KM, Eisinger SW, Dam LM, Tekle T, Carroll KC. Comparison of commercial antimicrobial susceptibility test methods for testing of Staphylococcus aureus and Enterococci against vancomycin, daptomycin, and linezolid. J Clin Microbiol. 2014 June;52(6):2216-22.
Key words: Staphylococcus aureus, enterococci, susceptibility testing, linezolid, daptomycin.

11. Savage WJ, Hamilton R, Tobian AAR, Milne G, Kaufman RM, Savage JH, Borge D, Ness PM. Defining risk factors and presentation of allergic reactions to platelet transfusion. J Allergy Clin Immunol. 2014 Jun;133(6):1772-5.e9.
Key words: risk factors, allergic reactions, platelet transfusion

12. Schroeder LF, Amukele T. Medical laboratories in sub-Saharan Africa that meet international quality standards. Am J Clin Pathol . 2014 Jun;141(6):791-5.
Key words: Accreditation, Africa, quality, laboratory, global health

13. Tilson MP, Bishop JA. Utility of p40 in the differential diagnosis of small round blue cell tumors of the sinonasal tract. Head Neck Pathol .2014 Jun;8(2):141-5.
Key words: sinonasal tract, tumors, p40, differential diagnosis

14. Tobian AAR, Fuller AK, Uglik K, Tisch DJ, Borge PD, Benjamin RJ, Ness PM, King KE. The impact of platelet additive solution apheresis platelets on allergic transfusion reactions and corrected count increment. Transfusion. 2014 Jun;54(6):1523-9.
Key words: platelet, apheresis, transfusions;jsessionid=

15. Voltaggio L, Montgomery E. Gastric mesenchymal lesions other than gastrointestinal stromal tumor. Diagn Histopathol. 2014 June;20(6):228-38.
Key words: gastric schwannoma, gastrointestinal stromal tumor, sarcoma mesenteric fibromatosis
no PMID avaialble

1. Ao MH, Zhang H, Sakowski L, Sharma R, Illei PB, Gabrielson E, Askin F, Li QK. The utility of a novel triple marker (combination of TTF1, napsin A, and p40) in the subclassification of non-small cell lung cancer. Hum Pathol. 2014 May;45(5):926-34.
Key words: Immunohistochemical markers; Napsin A; Non-small cell lung carcinoma (NSCLC); Novel triple stain marker; P40
PMID: 24746197

2. Berman DM, Epstein JI. When is prostate cancer really cancer? Urol Clinic N Amer. 2014 May;41:339-46.
Key words: gleason, prostate cancer
PMID: 24725494

3. Borowitz MJ. Mixed phenotype acute leukemia. Cytometry B Clin Cytom. 2014 May;86(3):152-3.
Key words: phenotype, acute leukemia;jsessionid=
PMID: 24474569

4. Chaux A, Munari E, Cubilla AL, Hicks J, Lecksell K, Burnett AL, Netto GJ. Immunohistochemical expression of the mammalian target of rapamycin pathway in penile squamous cell carcinomas: a tissue microarray study of 112 cases. Histopathology. 2014 May;64(6):863-71.
Key words: PTEN; human papillomavirus; mTOR; mammalian target of rapamycin; penile cancer; squamous cell carcinoma

5. Coates TJ, Kulich M, Zelaya CE, Celantano DD, Chariyalertsak S, Chingono A, Gray G, Mbwambo JKK, Morin FS, Richter L, Sweat M, van Rooven H, McGrath N, Fiamma A, Laeyendecker O, Piwowar-Manning E, Szerekes G, Donnell D, Eshleman SH. Effect of community-based voluntary counselling and testing on HIV incidence and social and behavioural outcomes (NIMH Project Accept; HPTN 043): a cluster-randomised trial. Lancet Global Health. 2014 May;2:e267-e277.
Key words: HIV, prevention, randomized trial, Project Accept, HPTN
No PMID available

6. Cox R, Vang R, Epstein JI. Papillary cystadenoma of the epididymis and broad ligament: Morphological and immunohistochemical overlap with clear cell papillary renal cell carcinoma. Am J Surg Pathol .2014 May;38:713-8.
Key words: Papillary cystadenoma, clear cell renal cell carcinoma, CAIX, Cytokeratin 7

7. Gurda GT, Zhu Q, Bai H, Pan D, Schwarz KB, Anders RA. The use of Yes-associated protein expression in the diagnosis of persistent neonatal cholestatic liver disease. Hum Pathol. 2014 May;45(5):1057-64.
Key words: Bile duct obstruction; Bile ductular reaction; Biliary atresia; Hippo pathway; Neonatal cholestasis; Neurofibromatosis 2 (NF2); Verteporfin (VP); Yes-associated protein (YAP)
PMID: 24746211

8. Olson MT, Harrington C, Beierl K, Chen G, Thiess M, O'Neill A, Taube J, Zeiger MA, Lin MT, Eshleman JR. BRAF pyrosequencing analysis aided by a lookup table. Am J Clin Pathol. 2014 May;141:639-47.
Key words: BRAF mutations; Bioinformatics; Pyromaker; Pyrosequencing; Pyrosequencing analysis
PMID: 24713734

9. Olson MT, Novak A, Trotter J, Sterling F, Kelly D, Sachs S, Cornish TC, Boonyaarunnate T, Toll A, Tatsas AD, Maleki Z, Erozan YS, Rosenthal DL. Reproducibility of The Johns Hopkins Hospital Template for Urologic Cytology Samples. J Am Soc Cytopathol. 2014 May-June;3(3):156-64.
Key words: Non-gynecologic cytopathology, Paris system for reporting urinary cytopathology, inter-observer reproducibility, informatics
No PMID available

10. Rodi N, Sharma R, Sharma R, Zampella J, Dai L, Taylor MS, Hruban RH, Iacobuzio-Donahue CA, Maitra A, Torbenson MS, Goggins M, Shih IM, Duffield AS, Montgomery EA, Gabrielson E, Netto GJ, Lotan TL, De Marzo AM, Westra W, Binder ZA, Orr BA, Gallia GL, Eberhart CG, Boeke JD, Harris CR, Burns KH. Long interspersed element-1 protein expression is a hallmark of many human cancers. Am J Pathol. 2014 May;184(5):1280-6.
Key words: tumor marker, mobile DNA, transposon, retrotransposition, LINE-1

11. Sartori DA, Chan DW. Biomarkers in prostate cancer: what's new? Curr Opin Oncol. 2014 May;26(3):259-64.
Key words: aggressiveness, biomarkers, genomics, prostate cancer, proteomics

12. Smith NE, Illei PB, Allaf M, Gonzalez N, Morris K, Hicks J, Demarzo A, Reuter VE, Amin MB, Epstein JI, Netto GJ, Argani P. t(6;11) renal cell carcinoma (RCC): expanded immunohistochemical profile emphasizing novel RCC markers and report of 10 new genetically confirmed cases. Am J Surg Pathol. 2014 May;38(5):604-14.
Key words: Renal Cell Carcinoma; Translocation; TFEB

1. Emory JF, Seserko LA, Marzinke MA. Development and bioanalytical validation of a liquid chromatographic-tandem mass spectrometric (LC-MS/MS) method for the quantification of the CCR5 antagonist maraviroc in human plasma. Clin Chim Acta. 2014 Apr 20;431:198-205.
Key words: Assay validation; CCR5 antagonist; HIV; LC-MS/MS; Maraviroc
PMID: 24561264

2. Gurda GT, Vandenbussche CJ, Yonescu R, Gonzalez-Roibon N, Ellis CL, Batista DA, Netto GJ. Sacrococcygeal teratomas: clinico-pathological characteristics and isochromosome 12p status. Mod Pathol. 2014 Apr;27(4):562-8.
Key words: teratomas, isochromosome, sacrococcygeal
PMID: 24051698

3. Izumi K, Li Y, Ishiguro H, Zheng Y, Yao JL, Netto GJ, Miyamoto H. Expression of UDP-glucuronosyltransferase 1A in bladder cancer: association with prognosis and regulation by estrogen. Mol Carcinog. 2014 Apr;53(4):314-24.
Key words: 17?-estradiol; SVHUC cell line; immunohistochemistry; ovariectomy; urothelial neoplasm
PMID: 23143693

4. Karafin MS, Humphrey RL, Detrick B. Evaluation of monoclonal and oligoclonal gammopathies in a pediatric population in a major urban center. Am J Clin Pathol. 2014 Apr;141(4):482-7.
Key words: Pediatric, monoclonal, oligoclonal, gammopathy, monoclonal protein

5. Karram S, Kao CS, Osunkoya AO, Ulbright TM, Epstein JI. Idiopathic granulomatous orchitis: morphology and evaluation of its relationship to IgG4 related disease. Hum Pathol 2014 Apr;45(4):844-50.
Key words: orchitis, granulomas, igG4 related diseases
PMID: 24656095

6. Kim H, Saka B, Knight S, Borges M, Childs E, Klein AP, Wolfgang CL, Herman JM, Adsay V, Hruban RH, Goggins M. Having pancreatic cancer with tumoral loss of ATM and normal TP53 protein expression is associated with a poorer prognosis. Clin Cancer Res. 2014 Apr 1;20(7):1865-72.
Key words: pancreatic cancer, ATM, TP53, protein expression

7. Kryvenko ON, Carter HB, Trock BJ, Epstein JI. Biopsy criteria for determining appropriateness for active surveillance in the modern era. Urology. 2014 Apr;83(4):869-74.
Key words: prostate carcinoma, needle biopsy, Gleason grade, African Americans

8. Li Y, Ishiguro H, Kawahara T, Kashiwagi E, Izumi K, Miyamoto H. Loss of GATA3 in bladder cancer promotes cell migration and invasion. Cancer Biol Ther. 2014 Apr 1;15(4):428-35.
Key words: GATA3; bladder cancer; cell invasion; cell migration; cell proliferation
PMID: 24448324

9. Nagineni CN, Raju R, Nagineni KK, Kommineni VK, Cherukuri A, Kutty RK, Hooks JJ, Detrick B. Resveratrol suppresses expression of VEGF by human retinal pigment epithelial cells: potential nutraceutical for age-related macular degeneration. Aging Dis. 2014 Apr 1;5(2):88-100.
Key words: Age related macular degeneration, retina, VEGF, RPE cells, cytokines

10. Poling JS, Ma XJ, Bui S, Luo Y, Koch WM, Westra WH. Human papillomavirus (HPV) status of non-tobacco related squamous cell carcinomas of the lateral tongue. Oral Oncol. 2014 Apr;50(4):306-10.
Key words: head and neck cancer, oral cancer, p16, RNA in situ hybridization, smoking

11. Riedel S. The value of postmortem microbiology cultures. J Clin Microbiol 2014 Apr;52(4):1028-33.
Key words: microbiology, cultures, postmortem examination
PMID: 24403308

12. Schieffer KM, Tan KE, Stamper PD, Somogyi A, Andrea SB, Wakefield T, Romagnoli M, Chapin KC, Wolk DM, Carroll KC. Multicenter evaluation of the Sepsityper™ extraction kit and MALDI-TOF MS for direct identification of positive blood culture isolates using the BD BACTEC™ FX and VersaTREK(®) diagnostic blood culture systems. J Appl Microbiol. 2014 Apr;116(4):934-41.
Key words: MALDI-TOF MS; Sepsityper; bacteraemia; blood cultures; sepsis

13. Suwantarat N, Watkins T, Lee R, Carroll KC, Zhang SX. False positive reaction of L-canavanine glycine bromothymol blue medium with candida famata. J Clin Microbiol. 2014 Apr;52(4):1308-9. (letter)
Key words: false positive, L-canavanine glycine bromothymol blue, candida famata

14. Vandenbussche CJ, Ho CY, Nugent SL, Ali SZ. Extraneural metastases of primary central nervous system tumors identified by fine needle aspiration: a retrospective analysis. Acta Cytol. 2014 Mar-Apr;58(2):117-24.
Key words: fine needle aspiration, central nervous system tumor, extraneural metastases

15. Yano T, Ferlito M, Aponte A, Kuno A, Miura T, Murphy E, Steenbergen C. Pivotal role of mTORC2 and involvement of ribosomal protein S6 in cardioprotective signaling. Circ Res. 2014 Apr 11;114(8):1268-80.
Key words: insulin, ischemia-reperfusion injury, ischemic preconditioning, mTORC2, rapamycin
PMID: 24557881

1. Crane GM, Ambinder RF, Shirley CM, Fishman EK, Kasamon YL, Taube JM, Borowitz MJ, Duffield AS. HHV-8-positive and EBV-positive intravascular lymphoma: an unusual presentation of extracavitary primary effusion lymphoma. Am J Surg Pathol. 2014 Mar;38(3):426-32.
Key words: lymphoma, primary effusion

PMID: 24525514

2. Ding D, Lim KS, Eberhart CG. Arsenic trioxide inhibits Hedgehog, Notch and stem cell properties in glioblastoma neurospheres. Acta Neuropathol Commun. 2014 Mar 31;2(1):31.
Key words: arsenic trioxide, hedgehog, glioblastoma

3. Fowler MG, Coovadia H, Herron CM, Maldonado Y, Chipato T, Moodley D, Musoke P, Aizire J, Manji K, Stranix-Chibanda L, Fawzi W, Chetty V, Msweli L, Kisenge R, Brown E, Mwatha A, Eshleman SH, Richardson P, Allen M, George K, Andrew P, Zwerski S, Mofenson LM, Jackson JB; for the HPTN 046 Protocol Team. Efficacy and safety of an extended nevirapine regimen in infants of breastfeeding mothers with HIV-1 infection for prevention of HIV-1 transmission (HPTN 046): 18-month results of a randomized, double-blind, placebo-controlled trial. J Acquir Immune Defic Syndr. 2014 Mar 1;65(3):366-74.
Key words: HIV, breastfeeding, nevirapine

4. Gurda GT, Baras AS, Kurman RJ. Ki-67 index as an ancillary tool in the differential diagnosis of proliferative endometrial lesions with secretory change. Int J Gynecol Pathol. 2014 Mar;33(2):114-9.
Key words: endometrial lesion, differential diagnosis
PMID: 24487464

5. Jiao Y, Yonescu R, Offerhaus GJ, Klimstra DS, Maitra A, Eshleman JR, Herman JG, Poh W, Pelosof L, Wolfgang CL, Vogelstein B, Kinzler KW, Hruban RH, Papadopoulos N, Wood LD. Whole-exome sequencing of pancreatic neoplasms with acinar differentiation. J Pathol. 2014 Mar;232(4):428-35.
Key words: pancreatic neoplasm, exome
PMID: 24293293

6. Matthaei H, Wu J, Dal Molin M, Shi C, Perner S, Kristiansen G, Lingohr P, Kalff JC, Wolfgang CL, Kinzler KW, Vogelstein B, Maitra A, Hruban RH. GNAS Sequencing Identifies IPMN-specific Mutations in a Subgroup of Diminutive Pancreatic Cysts Referred to as "Incipient IPMNs". Am J Surg Pathol. 2014 Mar;38(3):360-3.
PMID: 24525507

7. Ning Y, Slovak ML, Schultz RA, Gojo I, Baer MR. Cryptic chromosome abnormalities in a patient with mixed phenotype acute leukemia. Leuk Lymphoma. 2014 Mar;55(3):680-2.
Key words: leukemia, chromosome abnormalities
PMID: 23725388

8. Olson MT, Novak A, Boonyaarunnate T, Shahid H, Kirby J, Ali SZ. Cytotechnologist attended on-site evaluation of adequacy for bone and soft tissue fine needle aspiration. J Am Soc Cytopathol 2014 Mar; 3(2):60-6.
Key words: fine needle aspiration, cytotechnologist
No PMID available

9. Perica K, Tu A, Richter A, Bieler JG, Edidin M, Schneck JP. Magnetic field-induced T cell receptor clustering by nanoparticles enhances T cell activation and stimulates antitumor activity. ACS Nano.2014 Mar 25;8(3):2252-60.
Key words: nanoparticles, T cell receptor (TCR), magnetic field, nano-aAPC

10. Matthaei H, Wu J, dal Molin M, Shi C, Perner S, Kristiansen G, Lingohr P, Kalff JC, Wolfgang CL, Kinzler KW, Vogelstein B, Maitra A, Hruban RH. GNAS sequencing identifies IPMN-specific mutations in a subgroup of diminutive pancreatic cysts referred to as "Incipient IPMNs." Am J Surg Pathol. 2014 Mar;38(3):360-3.
Key words: incipient IPMN, intraductal papillary mucinous neoplasm, GNAS mutation, pancreatic cyst
PMID: 24525507

11. Moore R, Blankson JN, Eshleman SH. Failure to identify HIV-infected individuals in a clinical trial using a single HIV rapid test for screening. HIV Clin Trials. 2014 Mar;15(2):62-8.
Key words: HIV, diagnosis, rapid test, viral suppression

12. Rajan Kd A, Burris C, Iliff N, Grant M, Eshleman JR, Eberhart CG.DNA mismatch repair defects and microsatellite instability status in periocular sebaceous carcinoma. Am J Ophthalmol. 2014 Mar;157(3):640-7.e1-2.
Key words: periocular sebaceous carcinoma, microsatellite
PMID: 24321472

13. Tilson MP, Gallia GL, Bishop JA. Among sinonasal tumors, CDX-2 immunoexpression is not restricted to intestinal-type adenocarcinomas. Head Neck Pathol. 2014 Mar;8(1):59-65.
Key words: sinonasal tumor, CDX-2, immunoexpression, adenocarcinoma

14. Tobian AA, Gaydos C, Gray RH, Kigozi G, Serwadda D, Quinn N, Grabowski MK, Musoke R, Ndyanabo A, Nalugoda F, Wawer MJ, Quinn TC. Male circumcision and Mycoplasma genitalium infection in female partners: a randomised trial in Rakai, Uganda. Sex Transm Infect .2014 Mar;90(2):150-4.
Key words: circumcision, Uganda, mycoplasma infection

15. Wood LD, Salaria SN, Cruise MW, Giardiello FM, Montgomery EA. Upper GI tract lesions in familial adenomatous polyposis (FAP): enrichment of pyloric gland adenomas and other gastric and duodenal neoplasms. Am J Surg Pathol. 2014 Mar;38(3):389-93.
Key words: GI tract, lesions, familial adenomatous polyposis

1. Bagnasco SM, Zachary AA, Racusen LC, Arend LJ, Carter-Monroe N, Alachkar N, Nazarian SM, Lonze BE, Montgomery RA, Kraus ES. Time course of pathologic changes in kidney allografts of positive crossmatch HLA-incompatible transplant recipients. Transplantation 2014 Feb 27;97(4):440-5.
Key words: Kidney, transplant, rejection, glomerulopathy, antibody mediated rejection
PMID: 24531821

2. Banet N, Descipio C, Murphy KM, Beierl K, Adams E, Vang R, Ronnett BM. Characteristics of hydatidiform moles: analysis of a prospective series with p57 immunohistochemistry and molecular genotyping. Mod Pathol. 2014 Feb;27(2):238-54.
Key words: hydatidiform moles, immunohistochemistry, genotype
PMID: 23887308

3. Bishop JA, Montgomery EA, Westra WH. Use of p40 and p63 immunohistochemistry and human papillomavirus testing as ancillary tools for the recognition of head and neck sarcomatoid carcinoma and its distinction from benign and malignant mesenchymal processes. Am J Surg Pathol. 2014 Feb;38(2):257-64.
Key words: immunohistochemistry, sarcomatoid carcinoma, mesenchyma, human papillomavirus
PMID: 24418859

4. Chaux A, Cubilla AL, Haffner MC, Lecksell KL, Sharma R, Burnett AL, Netto GJ. Combining routine morphology, p16INK4a immunohistochemistry, and in situ hybridization for the detection of human papillomavirus infection in penile carcinomas: A tissue microarray study using classifier performance analyses. Urol Oncol. 2014 Feb;32(2):171-7.
Key words: immunohistochemistry, penile carcinoma, human papillomavirus
PMID: 23499169

5. Gonzalez-Roibon N, Faraj SF, Munari E, Bezerra SM, Albadine R, Sharma R, Argani P, Allaf ME, Netto GJ. Comprehensive profile of GATA binding protein 3 immunohistochemical expression in primary and metastatic renal neoplasms. Hum Pathol. 2014 Feb;45(2):244-8.
Key words: immunohistochemistry, GARA binding protein 3, renal neoplasm

6. Guan H, Gurda G, Lennon MA, Hruban RH, Erozan YS. Intraductal tubulopapillary neoplasm of the pancreas on fine needle aspiration: case report with differential diagnosis. Diagn Cytopathol. 2014 Feb;42(2):156-60.
Key words: ITPN, cytopathology, intraductal tubulopapillary neoplasm, pancreatic neoplasm
PMID: 22807417

7. Haider BA, Baras AS, McCall MN, Hertel JA, Cornish TC, Halushka MK. A critical evaluation of microRNA biomarkers in non-neoplastic disease. PLoS One. 2014 Feb 26;9(2):e89565.
Key words: miRNA, miR-16, biomarker, serum, plasma

8. Henemyre-Harris CL, Samols M, Wenick AS, Sokoll LJ. Glow stick or urine sample? Clin Chem. 2014 Feb;60(2):425-6.
Key words: urine sample, pathology

9. Kuhn E, Ayhan A, Shih IeM, Seidman JD, Kurman RJ. The pathogenesis of atypical proliferative Brenner tumor: an immunohistochemical and molecular genetic analysis. Mod Pathol. 2014 Feb;27(2):231-7.
Key words: atypical proliferative, Brenner tumor, CDKN2A, mutation, pathogenesis

10. Petrides AK, Clarke W, Marzinke MA. Application and utility of pharmacogenetics in the clinical laboratory. J Analyt Molecul Tech. 2014 Feb 1(1):15.
Key words: pharmacogenetics, Pgx, genotyping, polymorphism, SNP
no PMID available

11. Rodriguez E, Tellschow S, Steinberg DM, Montgomery E. Cytologic findings of gastric schwannoma: a case report. Diagn Cytopathol 2014 Feb;42(2):177-80.
Key words: cytology, gastric schwannoma;jsessionid=
PMID: 24436245

12. Singer N, Aina-Mumuney A, Poling J, Burton EC. Fetal death resulting from an isolated congenital partial pericardial defect. Obstet Gynecol. 2014 Feb;123(2 Pt 2):443-6.
Key words: pericardial defect, fetal death

13. Ferlito M, Wang Q, Fulton WB, Colombani PM, Marchionni L, Fox-Talbot K, Paolocci N, Steenbergen C. H2S increases survival during sepsis: protective effect of CHOP inhibition. J Immunol. 2014 Feb 15;192(4):1806-14.
Key words: H2S, sepis

14. Tan HL, Sood A, Rahimi HA, Wang W, Gupta N, Hicks J, Mosier S, Gocke CD, Epstein JI, Netto GJ, Liu W, Isaacs WB, De Marzo AM, Lotan TL. Rb loss is characteristic of prostatic small cell neuroendocrine carcinoma. Clin Cancer Res. 2014 Feb 15;20(4):890-903.
Key words: retinoblastoma, prostatic small cell neuroendocrine carcinoma

15. Wu CY, Yang LH, Yang HY, Knoff J, Peng S, Lin YH, Wang C, Alvarez RD, Pai SI, Roden RB, Hung CF, Wu TC. Enhanced cancer radiotherapy through immunosuppressive stromal cell destruction in tumors. Clin Cancer Res. 2014 Feb 1;20(3):644-57.
Key words: radiotherapy, stromal cell destruction

1. Chiu YL, Shan L, Huang H, Haupt C, Bessell C, Canaday DH, Zhang H, Ho YC, Powell JD, Oelke M, Margolick JB, Blankson JN, Griffin DE, Schneck JP. Sprouty-2 regulates HIV-specific T cell polyfunctionality. J Clin Invest. 2014 Jan 2;124(1):198-208.
Key words: HIV, T cell
PMID: 24292711

2. Codispoti K, Mosier S, Ramsey R, Lin MT, Rodriguez FJ. Genetic and pathologic evolution of early secondary gliosarcoma. Brain Tumor Pathol. 2014 Jan;31(1):40-6.
Key words: gliosarcoma, pathology
PMID: 23324827

3. Cousins MM, Konikoff J, Laeyendecker O, Celum C, Buchbinder SP, Seage GR 3rd, Kirk GD, Moore RD, Mehta SH, Margolick JB, Brown J, Mayer KH, Koblin BA, Wheeler D, Justman JE, Hodder SL, Quinn TC, Brookmeyer R, Eshleman SH. HIV diversity as a biomarker for HIV incidence estimation: including a high resolution melting diversity assay in a multi-assay algorithm. J Clin Microbiol 2014 Jan;52(1):115-21.
Key words: HIV, diversity, incidence, high resolution melting, HRM
PMID: 24153134

4. Darshan M, Zheng Q, Fedor HL, Wyhs N, Yegnasubramanian S, Lee P, Melamed J, Netto GJ, Trock BJ, De Marzo AM, Sfanos KS. Biobanking of derivatives from radical retropubic and robot-assisted laparoscopic prostatectomy tissues as part of the prostate cancer biorepository network. Prostate. 2014 Jan;74(1):61-9.
Key words: biobanking, laparoscopic prostatectomy, prostate cancer

5. Dudas R, Vandenbussche CV, Baras A, Ali SZ, Olson MT. Inexpensive telecytology solutions that use the raspberry Pi and iPhone. J Am Soc Cytopathol. 2014 Jan;3:49-55.
Key words: telecytology, technology, iPhone
no PMID available

6. Ho CY, Troncoso JC, Knox D, Stark W, Eberhart CG. Beta-amyloid, phospho-tau and alpha-synuclein deposits similar to those in the brain are not identified in the eyes of Alzheimer's and Parkinson's disease patients. Brain Pathol 2014 Jan;24(1):25-32.
Key words: amyloid eye, lens, synuclein, tau
PMID: 23714377

7. Holmes BJ, Westra WH. The expanding role of cytopathology in the diagnosis of HPV-related squamous cell carcinoma of the head and neck. Diagn Cytopathol 2014 Jan;42(1):85-93.
Key words: branchial cleft cyst, cell block, cystic squamous cell carcinoma, fine needle aspiration (FNA), human papillomavirus
PMID: 23749770

8. Kacker S, Ness PM, Savage WJ, Frick KD, Shirey RS, King KE, Tobian AAR. Cost-effectiveness of prospective red blood cell antigen matching to prevent alloimmunization among sickle cell patients. Transfusion 2014 Jan;54(1):86-97.
Key words: red blood cell, alloimmunization, sickle cell anemia
PMID: 24571485

9. Lee SL, Illei PB, Han JS, Epstein JI. Florid mesothelial hyperplasia of the tunica vaginalis mimicking malignant mesothelioma: A clinicopathologic study of 12 cases. Am J Surg Pathol 2014 Jan;38(1):54-9.
Key words: mesothelioma, testis neoplasms, mesothelium, hydrocele
No PMID available

10. Marzinke MA, Clarke W, Wang L, Cummings V, Liu TY, Piwowar-Manning E, Breaud A, Griffith S, Buchbinder S, Shoptaw S, Del Rio C, Magnus M, Mannheimer S, Fields SD, Mayer KH, Wheeler DP, Koblin BA, Eshleman SH, Fogel JM. Nondisclosure of HIV status in a clinical trial setting: antiretroviral drug screening can help distinguish between newly diagnosed and previously diagnosed HIV infection. Clin Infect Dis. 2014 Jan;58(1):117-20.
Key words: HIV, antiretroviral drug screening
PMID: 24092804

11. Montgomery E, Voltaggio L. Mesenchymal polyps. Diagn Histopathol 2014 Jan;20(1):19-29.
Key words: mesenchymal polyps

No PMID available

12. Olson MT, Boonyaarunnate T, Aksoy Altinboga A, Ali SZ. 'Suspicious for a papillary thyroid carcinoma' before and after The Bethesda System for reporting thyroid cytopathology: Impact of standardized terminology. Acta Cytol 2014 Jan;58(1):15-22.
Key words: papillary thyroid carcinoma, Bethesda System
PMID: 24192286

13. Perica K, Medero ADL, Malarvizhi D, Chiu Y-L, Bieler JG, Niemöller M, Assenmacher M, Richter A, Edidin M, Oelke M, Schneck JP. Nanoscale artificial antigen presenting cells for T cell immunotherapy. Nanomedicine. 2014 Jan;10(1):119-29.
Key words: T cell immunotherapy, antigen, nanoscale
PMID: 23891987

14. Singhi AD, Arnold CA, Crowder CD, Lam-Himlin DM, Voltaggio L, Montgomery EA. Esophageal leukoplakia or epidermoid metaplasia: a clinicopathological study of 18 patients. Modern Pathol .2014 Jan;27:38-43.
Key words: esophagus, leukoplakia, metaplasia
PMID: 23765246

15. Sunshine JC, Perica K, Schneck JP, Green JJ. Particle shape dependence of CD8+ T cell activation by artificial antigen presenting cells. Biomaterials. 2014 Jan;35(1):269-77.
Key words: CD8, T cells, antigen presenting cells
PMID: 24099710

1. Carroll KC, Buchan BW, Tan S, Stamper PD, Riebe KM, Pancholi P, Kelly C, Rao A, Fader R, Cavagnolo R, Wilson W, Goering RV, Trevino EA, Weissfeld AS, Ledeboer NA. Multicenter evaluation of the Verigene Clostridium difficile nucleic acid test. J Clin Microbiol. 2013 Dec;51(12):4120-5.
Key words: Clostridium difficile, Verigene, toxin A, toxin B, nucleic acid amplification
PMID: 24088862

2. Chaux A, Han JS, Lee S, Gonzalez-Roibon N, Sharma R, Burnett AL, Cubilla AL, Netto GJ. Immunohistochemical profile of the penile urethra and differential expression of GATA3 in urothelial versus squamous cell carcinomas of the penile urethra. Hum Pathol. 2013 Dec;44(12):2760-7.
Key words: penile urethra, GATA3, squamous cell carcinoma

3. Ellis CL, Partin AW, Han M, Epstein JI. Adenocarcinoma of the prostate with Gleason score 9-10 on core biopsy: Correlation with findings at radical prostatectomy and prognosis. J Urol. 2013 Dec;190(6):2068-73.
Key words: prostate adenocarcinoma, Gleason grade

4. Gonzalez-Roibon N, Albadine R, Sharma R, Faraj SF, Illei PB, Argani P, Ertoy D, Allaf ME, Netto GJ. The role of GATA binding protein 3 in the differential diagnosis of collecting duct and upper tract urothelial carcinomas. Hum Pathol. 2013 Dec;44(12):2651-7.
Key words: Collecting duct carcinoma, GATA3, upper tract urothelial carcinoma

5. Hütt-Cabezas M, Karajannis MA, Zagzag D, Shah S, Horkayne-Szakaly I, Rushing EJ, Cameron JD, Jain D, Eberhart CG, Raabe EH, Rodriguez FJ. Activation of mTORC1/mTORC2 signaling in pediatric low-grade glioma and pilocytic astrocytoma reveals mTOR as a therapeutic target. Neuro Oncol. 2013 Dec;15(12):1604-14.
Key words: TORC1, glioma, pilocytic astrocytoma, mTOR

6. Jiao Y, Pawlik TM, Anders RA, Selaru FM, Streppel MM, Lucas DJ, Niknafs N, Guthrie VB, Maitra A, Argani P, Offerhaus GJA, Roa JC, Roberts LR, Gores GJ, Popescu I, Alexandrescu ST, Dima S, Fassan M, Simbolo M, Mafficini A, Capelli P, Lawlor RT, Ruzzenente A, Guglielmi A, TortoraG, de Braud F, Scarpa A, Jarnagin W, Klimstra D, Karchin R, Velculescu VE, Hruban RH, Vogelstein B, Kinzler KW, Papadopoulos N, Wood LD. Exome sequencing reveals frequent inactivating mutations in BAP1, ARID1A, and PBRM1 in intrahepatic cholangiocarcinomas. Nat Genet 2013 Dec;45(12):1470-3.
Key words: exome sequencing, mutations, intrahepatic cholangiocarcinomas

7. Kinde I, Munari E, Faraj SF, Hruban RH, Schoenberg M, Bivalacqua T, Allaf M, Springer S, Wang Y, Diaz LA Jr, Kinzler KW, Vogelstein B, Papadopoulos N, Netto GJ. TERT Promoter mutations occur early in urothelial neoplasia and are biomarkers of early disease and disease recurrence in urine. Cancer Res. 2013 Dec 15;73(24):7162-7.
Key words: urothelial neoplasia, disease recurrence, urine

8. Munari E, Fujita K, Faraj S, Chaux A, Gonzalez-Roibon N, Hicks J, Meeker A, Nonomura N, Netto GJ. Dysregulation of mammalian target of rapamycin pathway in upper tract urothelial carcinoma. Hum Pathol. 2013 Dec;44(12):2668-76.
Key words: rapamycin, urothelial carcinoma

9. Robertson S, Hyder O, Dodson R, Nayar SK, Poling J, Beierl K, Eshleman JR, Lin MT, Pawlik TM, Anders RA. The frequency of KRAS and BRAF mutations in intrahepatic cholangiocarcinomas and their correlation with clinical outcome. Hum Pathol. 2013 Dec;44(12):2768-73.
Key words: cholangiocarcinoma, clinical outcome, KRAS, BRAF

10. Salaria SN, Abu Alfa AK, Cruise MW, Wood LD, Montgomery EA. Lichenoid esophagitis: clinicopathologic overlap with established esophageal lichen planus. Am J Surg Pathol. 2013 Dec;37(12):1889-94.
Key words: lichenoid esophagitis; lichen planus, esophagus

11. Schwartz LE, Begum S, Westra WH, Bishop JA. GATA3 immunohistochemical expression in salivary gland neoplasms. Head Neck Pathol. 2013 Dec;7(4):311-5.
Key words: GATA3, immunohistochemistry, salivary gland, neoplasms

12. Sfanos KS, Isaacs WB, DeMarzo AM. Infections and inflammation in prostate cancer. Am J Clin and Exp Urol. 2013 Dec;1(1):3-11.
Key words: Infections, prostatitis, prostate cancer, inflammation, animal models
no PMID available

13. Venigalla S, Wu G, Miyamoto H. The impact of frozen section analysis during partial nephrectomy on surgical margin status and tumor recurrence: A clinicopathologic study of 433 cases. Clin Genitourin Cancer. 2013 Dec;11(4):527-36.
Key words: Intraoperative frozen section assessment, partial nephrectomy, renal cell carcinoma, surgical margin, tumor recurrence

14. Wood LD, Heaphy CM, Daniel HJ, Naini BV, Lassman CR, Arroyo MR, Kamel IR, Cosgrove D, Boitnott J, Meeker AK, Torbenson M. Chromophobe hepatocellular carcinoma with abrupt anaplasia: a proposal for a new subtype of hepatocellular carcinoma with unique morphologic and molecular features. Mod Pathol. 2013 Dec; 26(12):1586-93.
Key words: hepatocellular carcinoma, anaplasia, chromophobe

15. Zhang SX. Enhancing molecular approaches for diagnosis of fungal infections. Future Microbiol 2013 Dec;8:1599-611.
Key words: fungal infections, diagnosis, molecular assays, standardization, validation

1. Boonyaarunnate T, Olson MT, Ali SZ. Impact of flow cytometry in thyroid cytopathology. Acta Cytologica 2013 Nov;57(6):562-6.
Key words: flow cytometry, thyroid, cytopathology

2. Cimino-Mathews A, Hicks JL, Sharma R, Vang R, Illei PB, De Marzo A, Emens LA, Argani P. A subset of malignant phyllodes tumors harbors alterations in the Rb/p16 pathway. Hum Pathol. 2013 Nov;44(11):2494-500.
Key words: breast, phyllodes, p16, Rb

3. Ellis CL, Chang AG, Cimino-Mathews A, Argani P, Youssef RF, Kapur P, Montgomery EA, Epstein JI. GATA-3 immunohistochemistry in the differential diagnosis of adenocarcinoma of the urinary bladder. Am J Surg Pathol. 2013 Nov;37(11):1756-60.
Key words: gata3, urothelial carcinoma,bladder adenocarcinoma

4. Faraj SF, Albadine R, Chaux A, Gonzalez-Roibon N, Hicks J, Humphreys E, Partin A, Netto GJ. Activation of mammalian target of rapamycin signaling pathway markers in minute adenocarcinoma of the prostate. Urology. 2013 Nov;82(5):1083-9.

5. Fogel JM, Wang L, Parsons TL, Ou SS, Piwowar-Manning E, Chen Y, Mudhune VO, Hosseinipour MC, Kumwenda J, Hakim JG, Chariyalertsak S, Panchia R, Sanne I, Kumarasamy N, Grinsztejn B, Makhema J, Pilotto J, Santos BR, Mayer KH, McCauley M, Gamble T, Bumpus NN, Hendrix CW, Cohen MS, Eshleman SH. Undisclosed antiretroviral drug use in a multinational clinical trial (HIV Prevention Trials Network 052). J Infect Dis. 2013 Nov;208(10):1624-8.
Key words: HIV, antiretroviral, newly diagnosed, clinical trial, HIV prevention
PMID: 23908493

6. Guan B, Magomi T, Wang TL, Shih IeM. Establishing isogenic inducible cell lines using founder reporter lines and recombinase-mediated cassette exchange. Biotechniques 2013 Nov;55(5):233-42.
Key words: inducible system, gene expression

7. Kacker S, Ness PM, Savage WJ, Frick KD, McCullough J, King KE, Tobian AAR. Costs and effectiveness of platelet additive solution to prevent allergic transfusion reactions. Transfusion. 2013 Nov; 53:2609-18.
Key words: platelet additive solution, allergic transfusion reactions, transfusion
PMID: 23363552

8. Laeyendecker O, Kulich M, Donnell D, Komárek A, Omelka M, Mullis CE, Szekeres G, Piwowar-Manning E, Fiamma A, Gray RH, Lutalo T, Morrison C, Salata RA, Chipato T, Celum C, Kahle EM, Taha TE, Kumwenda NI, Abdool Karim, Q, Naranbhai V, Lingpappa J, Sweat MD, Coates T, Eshleman SH. Development of methods for cross-sectional incidence HIV estimation in a large community-randomized trial. PLoS One. 2013 Nov;8(11):e78818.
Key words: HIV, incidence, cross-sectional, clinical trial, HIV prevention

9. Lin J, Bigge J, Ulbright TM, Montgomery E. Anastomosing hemangioma of the liver and gastrointestinal tract: an unusual variant histologically mimicking angiosarcoma. Am J Surg Pathol. 2013 Nov;37(11):1761-5.

10. McCall CM, Shi C, Cornish TC, Klimstra DS, Tang LH, Basturk O, Mun LJ, Ellison TA, Wolfgang CL, Choti MA, Schulick RD, Edil BH, Hruban RH. Grading of well-differentiated pancreatic neuroendocrine tumors is improved by the inclusion of both Ki67 proliferative index and mitotic rate. Am J Surg Pathol.2013 Nov;37(11):1671-7.
Key words: pancreatic neuroendocrine tumor, pancreas, pancreatic cancer, islet cell tumor, Ki67, endocrine neoplasm

11. Nie X, Arend LJ. Pkd1 is required for male reproductive tract development. Mech Dev. 2013 Nov-Dec;130(11-12):567-76.
Key words: Polycystin-1, polycystic kidney disease, epididymis, efferent duct, infertility

12. Odia Y, Orr BA, Robert Bell W, Eberhart CG, Rodriguez FJ. cMYC expression in infiltrating gliomas: associations with IDH1 mutations, clinicopathologic features and outcome. J Neurooncol. 2013 Nov;115(2):249-59.

13. Olson MT, Novak A, Kirby J, Boonyaarunnate T, Ali SZ. Cytotechnologist-attended on-site evaluation of adequacy for metastatic disease involving bone and soft tissue. Acta Cytologica. 2013 Nov;57:550-6.

14. Seserko LA, Emory JF, Hendrix CW, Marzinke MA. The development and validation of an UHPLC-MS/MS method for the rapid quantification of the antiretroviral agent dapivirine in human plasma. Bioanalysis. 2013 Nov;5(22):2771-83.
Key words: HIV, Mass spectrometry, dapivirine, NNRTI

15. Yachida S, Iacobuzio-Donahue CA. Evolution and dynamics of pancreatic cancer progression. Oncogene. 2013 Nov 7;32(45):5253-60.

1. Bishop JA, Yonescu R, Batista D, Begum S, Eisele DW, Westra WH. Utility of mammaglobin immunohistochemistry as a proxy marker for the ETV6-NTRK3 translocation in the diagnosis of salivary mammary analogue secretory carcinoma. Hum Pathol. 2013 Oct;44(10):1982-8.
Key words: Acinic cell carcinoma, ETV6-NTRK3, mammaglobin, mammary analogue secretory carcinoma

2. Barin JG, Baldeviano GC, Talor MV, Wu L, Ong S, Fairweather D, Bedja D, Stickel NR, Fontes JA, Cardamone AB, Zheng D, Gabrielson KL, Rose NR, Ciháková D. Fatal eosinophilic myocarditis develops in the absence of IFN-? and IL-17A. J Immunol. 2013 Oct 15;191(8):4038-47.
Key words: eosinophilic myocarditis, interferon, interleukin

3. Chaux A, Albadine R, Schultz L, Hicks J, Carducci MA, Argani P, Allaf M, Netto GJ. Dysregulation of the mammalian target of rapamycin pathway in chromophobe renal cell carcinomas. Hum Pathol. 2013 Oct;44(10):2323-30.
Key words: Chromophobe renal cell carcinoma, mTOR, PTEN, AKT, S6

4. Cimino-Mathews A, Illei PB. Cytologic and histologic findings of iron pill-induced injury of the lower respiratory tract. Diagn Cytopathol. 2013 Oct;41(10):901-3.
Key words: breast carcinoma, metastasis, tumor infiltrating lymphocytes, Foxp3

5. Grab DJ, Nenortas E, Bakshi R, Nikolskaia OV, Friedman JE, Shapiro TA. Membrane active chelators as novel anti-African trypanosome and anti-malarial drugs. Parasitol Int. 2013 Oct;62(5):461-3.
Key words: DP-99, DP-460, plasmodium,trypanosoma brucei,membrane active chelator MAC

6. Heaphy CM, Yoon GS, Peskoe SB, Joshu CE, Lee TK, Giovannucci E, Mucci LA, Kenfield SA, Stampfer MJ, Hicks JL, De Marzo AM, Platz EA, Meeker AK. Prostate cancer cell telomere length variability and stromal cell telomere length as prognostic markers for metastasis and death. Cancer Discovery. 2013 Oct;3(10):1130-41.
Key words: Prostate cancer, prognostic biomarker, telomere, risk stratification, mortality

7. Le A, Dang CV. Studying Myc's role in metabolism regulation. Methods Mol Biol. 2013;1012:213-9.
Key words: oxygen consumption, glucose uptake, labeling cells with 13-C glucose or glutamine

8. Liu CM, Soldanova K, Nordstrom L, Dwan MG, Moss OL, Contente-Cuomo TL, Keim P, Price LB, Lane AP. Medical therapy reduces microbiota diversity and evenness in surgically recalcitrant chronic rhinosinusitis. Int Forum Allergy Rhinol. 2013 Oct;3(10):775-81.

9. Mao TL, Shih IM. The roles of ARID1A in gynecologic cancer. J Gynecol Oncol. 2013 Oct;24(4):376-81.
Key words: ovarian cancer, ARID1A, gynecologic cancer, chromatin remodeling

10. Martin LJ, Wong M. Aberrant regulation of DNA methylation in amyotrophic lateral sclerosis: a new target of disease mechanisms. Neurotherapeutics. 2013 Oct;10(4):722-33.

11. Morris BJ, Tobian AAR. Legal threat to infant male circumcision. JAMA Pediatr 2013 Oct;167:890-1.
Key words: infant male circumcision

12. Samols MA, Smith NE, Gerber JM, Vuica-Ross M, Gocke CD, Burns KH, Borowitz MJ, Cornish TC, Duffield AS. Software-automated counting of Ki-67 proliferation index correlates with pathologic grade and disease progression of follicular lymphomas. Am J Clin Pathol. 2013 Oct;140(4):579-87.

13. So JS, Epstein JI. GATA3 expression in paragangliomas: a pitfall potentially leading to misdiagnosis of urothelial carcinoma. Mod Pathol. 2013 Oct;26(10):1365-70.
Key words: bladder, paraganglioma

14. Srigley JR, Delahunt B, Eble JN, Egevad L, Epstein JI, Grignon D, Hes O, Moch H, Montironi R, Tickoo SK, Zhou M, Argani P; ISUP Renal Tumor Panel. The International Society of Urological Pathology (ISUP) Vancouver Classification of Renal Neoplasia. Am J Surg Pathol. 2013 Oct;37(10):1469-89
Key words: Renal, carcinoma, classification

15. Wood LD. Pancreatic cancer genomes: toward molecular subtyping and novel approaches to diagnosis and therapy. Mol Diagn Ther. 2013 Oct;17(5):287-97.

1. Bagby C, Ronnett BM, Yemelyanova A, Maleki Z, Kuhn E, Vang R. Clinically occult tubal and ovarian high-grade serous carcinomas presenting in uterine samples: diagnostic pitfalls and clues to improve recognition of tumor origin. Int J Gynecol Pathol. 2013 Sep;32(5):433-43.
Key words: Fallopian tube, ovary, high-grade serous carcinoma, serous tubal intraepithelial carcinoma, endometrial biopsy
PMID: 23896706

2. Davis MA, Gray RH, Grabowski MK, Serwadda D, Kigozi G, Gravitt PE, Nalugoda F, Watya S, Wawer MJ, Quinn TC, Tobian AA. Male circumcision decreases high-risk human papillomavirus viral load in female partners: a randomized trial in Rakai, Uganda. Int J Cancer. 2013 Sep 1;133(5):1247-52.
Key words: Human papillomavirus, male circumcision, Uganda, cervical cancer, sexually transmitted infections
PMID: 23400966

3. Eisinger SW, Schwartz M, Dam L, Riedel S. Evaluation of the BD Vacutainer Plus Urine C&S Preservative Tubes compared with nonpreservative urine samples stored at 4°C and room temperature. Am J Clin Pathol. 2013 Sep;140(3):306-13.
Key words: preservative tubes, vacutainer, urine samples
PMID: 23955448

4. Giannico GA, Ross HM, Lotan T, Epstein JI. Aberrant expression of p63 in adenocarcinoma of the prostate: A radical prostatectomy study. Am J Surg Pathol. 2013 Sep;37(9):1401-6.
Key words: p63, adenocarcinoma prostate
PMID: 23774168

5. Green WM, Hicks JL, De Marzo AD, Illei PB, Epstein JI. Immunohistochemical evaluation of TMPRSS2-ERG gene fusion in adenosis of the prostate. Hum Pathol. 2013 Sep;44(9):1895-901.
Key words: TMPRSS2-ERG gene fusion, adenosis, prostate
PMID: 23664537

6. Harrington CT, Lin EI, Olson MT, Eshleman JR. Fundamentals of pyrosequencing. Arch Pathol Lab Med. 2013 Sep;137(9):1296-303.
Key words: pyrosequencing
PMID: 23991743

7. Kacker S, Frick KD, Tobian AA. Constructing a model: economic evaluations in transfusion medicine, Part?3. Transfusion. 2013 Sep;53(9):1885-7.
Key words: economics, transfusion,transfusion medicine
PMID: 23560614

8. Kao CS, Epstein JI. Tubular adenoma of the urinary tract: a newly described entity. Hum Pathol. 2013 Sep;44(9):1890-4.
Key words : adenoma,urinary bladder
PMID: 23664485

9. Lin MT, Tseng LH, Beierl K, Thiess M, Chase N, Stafford A, Levis M, Eshleman JR, Gocke CD. Tandem duplication PCR: an ultra-sensitive assay for the detection of internal tandem duplications of the FLT3 gene. Diagn Mol Pathol. 2013 Sep;22(3):149-55.
Key words:PCR, assay, tandem duplications, FLT3 gene
PMID: 23846441

10. Mao TL, Ardighieri L, Ayhan A, Kuo KT, Wu CH, Wang TL, Shih IeM. Loss of ARID1A expression correlates with stages of tumor progression in uterine endometrioid carcinoma. Am J Surg Pathol. 2013 Sep;37(9):1342-8. PMID:24076775
Key words: ovarian cancer, ARID1A pathogenesis

PMID: 24076775

11. Riedel S, Carroll KC. Laboratory detection of sepsis: biomarkers and molecular approaches. Clin Lab Med. 2013 Sep;33(3):413-37.
Key words: sepsis, biomarkers, laboratory detection
PMID: 23931833

12. Singhi AD, Norwood S, Liu TC, Sharma R, Wolfgang CL, Schulick RD, Zeh HJ, Hruban RH. Acinar cell cystadenoma of the pancreas: a benign neoplasm or non-neoplastic ballooning of acinar and ductal epithelium? Am J Surg Pathol. 2013 Sep;37(0):1329-35.
Key words: acinar cell carcinoma, pancreas, development
PMID: 24076773

13. Tamma PD, Girdwood SC, Gopaul R, Tekle T, Roberts AA, Harris AD, Cosgrove SE, Carroll KC. The use of cefepime for treating AmpC B-lactamase-producing Enterobacteriaceae. Clin Infect Dis. 2013; 57:781-8.
Key words: Gram negative rods, cefepime, AmpC, Beta-lactamases, resistance
PMID: 23759352

14. Tobian AA, Grabowski MK, Serwadda D, Newell K, Ssebbowa P, Franco V, Nalugoda F, Wawer MJ, Gray RH, Quinn TC, Reynolds SJ; Rakai Health Sciences Program. Reactivation of herpes simplex virus type 2 after initiation of antiretroviral therapy. J Infect Dis. 2013 Sep 1;208(5):839-46.
Key words: herpes simplex virus type 2 (HSV-2), human immunodeficiency virus (HIV), immune reconstitution inflammatory syndrome (IRIS), acyclovir, reactivation
PMID: 23812240

15. Wolfgang CL, Herman JM, Laheru DA, Klein AP, Erdek MA, Fishman EK, Hruban RH. Recent progress in pancreatic cancer. CA Cancer J Clin. 2013 Sep;63(5):318-48.
Key words: pancreatic neoplasms, medical oncology, molecular biology, radiation oncology, radiology
PMID: 23856911

1. Belchis DA, Shekitka K, Gocke CD. Multi-institutional retrospective cohort study of spontaneous pneumothorax. Pathol Res Pract 2013 Aug;209(8):486-9.
Key words: Spontaneous pneumothorax, pneumothorax-associated fibroblastic lesion, multi-institutional cohort study
PMID: 23778154

2. Chang A, Brimo F, Montgomery EA, Epstein JI. Use of PAX8 and GATA3 in diagnosing
sarcomatoid renal cell carcinoma and sarcomatoid urothelial carcinoma. Hum Pathol. 2013 Aug;44(8):1563-8
Key words: pasx8, gata3, sarcomatoid renal cell carcinoma, sarcomatoid urothelial carcinoma

3. Gonzalez-Roibon N, Han JS, Lee S, Feng Z, Arslankoz S, Smith N, Pierorazio PM, Humphreys E, Deweese TL, Partin AW, Bivalacqua TJ, Han M, Trock B, Netto GJ. Comparison of biochemical recurrence free survival between periprostatic and pelvic lymph node metastases of prostate cancer. Int J Surg Pathol. 2013 Aug;21(4):352-7.

4. Green WM, Yonescu R, Morsberger L, Morris K, Netto GJ, Epstein JI, Illei PB, Allaf M, Ladanyi M, Griffin CA, Argani P. Utilization of a TFE3 break-apart FISH assay in a renal tumor consultation service. Am J Surg Pathol. 2013 Aug;37(8):1150-63.
Key words: Renal, carcinoma, translocaton, TFE3

5. Kacker S, Frick KD, Tobian AAR. Establishing a framework: economic evaluations in transfusion medicine part 2. Transfusion. 2013 Aug;53(8):1634-6.;jsessionid=

6. Kakiuchi Y, Choy B, Gordetsky J, Izumi K, Wu G, Rashid H, Joseph JV, Miyamoto H. Role of frozen section analysis of surgical margins during robot-assisted laparoscopic radical prostatectomy: a 2,608-case experience. Hum Pathol. 2013 Aug;44(8):1556-62.
Key words: Gleason score, intraoperative frozen section analysis, laparoscopic radical prostatectomy, surgical margin, tumor stage

7. Lai H, Fishman EK, Gerstenblith G, Brinker B, Hong T, Chen S, Li J, Tong W, Detrick B, Lai S. Vitamin D deficiency is associated with coronary artery calcification in cardiovascularly asymptomatic African Americans with HIV infection. Vasc Health Risk Manag. 2013;9:493-500.

PMID: 24009422

8. LeBlanc RE, Meriden Z, Sutton DA, Thompson EH, Neofytos D, Zhang SX. Cunninghamella echinulata causing fatally invasive fungal sinusitis. Diagn Microbiol Infect Dis. 2013 Aug;76(4):506-9.
Key words: Fungal sinusitis, Cunninghamella echinulata, zygomycetes, mucorales, mucromycosis

9. Poluektov YO, Kim A, Hartman IZ, Sadegh-Nasseri S. HLA-DO as the optimizer of epitope selection for MHC class II antigen presentation. PLoS One. 2013 Aug 8;8(8):e71228.
Key words: Immune mechanisms, antigen processing and presentation, autoimmunity, epitope selection, HLA-DR

10. Poluektov YO, Kim A, Sadegh-Nasseri S. HLA-DO and its role in MHC class II antigen presentation. Front Immunol. 2013 Aug;4(article260):1-5.
Key words: HLA-DO, HLA-DR antigens, MHC class II antigen processing, models for HLA-DO function, HLA-DM

11. Ramirez L, Hamad AR. Status of autoimmune diabetes 20-year after generation of BDC2.5-TCR transgenic non-obese diabetic mouse. World J Diabetes. 2013 Aug 15;4(4):88-91.
Key words: diabetes, transgenic mouse, autoimmune diabetes

12. Tilson MP, Jones RJ, Sexauer A, Griffin CA, Morsberger LA, Batista DA, Small D, Burns KH, Gocke CD, Vuica-Ross M, Borowitz MJ, Duffield AS. Targeted pathologic evaluation of bone marrow donors identifies previously undiagnosed marrow abnormalities. Biol Blood Marrow Transplant. 2013 Aug;19(8):1254-9.
Key words: cytogenetics, donor, flow cytometry, histology, marrow

13. Zhang M, Kao S, Ulbright TM, Epstein JI. Testicular fibrothecoma: a morphological and immunohistochemical study of 16 cases. Am J Surg Pathol. 2013 Aug;37(8):1208-14.
Key words: testis, sex cord stromal tumor, fibroma, thecoma

No PMID available

1. Al-Hussain TO, Cheng L, Zhang S, Epstein JI. Tubulocystic carcinoma of the kidney with poorly differentiated foci: A series of 3 cases with FISH analysis. Hum Pathol 2013 Jul;44:1406-11.
Key words: renal carcinoma, renal neoplasms, tubulocystic carcinoma, collecting duct carcinoma

2. Bishop JA, Yonescu R, Batista D, Eisele DW, Westra WH. Most nonparotid "acinic cell carcinomas" represent mammary analog secretory carcinomas. Am J Surg Pathol. 2013 Jul;37(7):1053-7.
Key words: mammary carcinoma, acinic cell carcinoma
PMID: 23681074

3. Burnham CA, Carroll KC. Diagnosis of clostridium difficile infection: an ongoing conundrum for clinicians and for clinical laboratories. Clin Microbiol Rev 2013 Jul;26(3):604-30.
Key words: colitis, clostridium difficile, toxin B, EIA, nucleic acid amplification

4. Cimino-Mathews A, Subhawong AP, Illei PB, Sharma R, Halushka MK, Vang R, Fetting JH, Park BH, Argani P. GATA3 expression in breast carcinoma: utility in triple-negative, sarcomatoid, and metastatic carcinomas. Hum Pathol 2013 Jul;44(7):1341-9.
Key words: breast, metastasis, GATA3

5. Clarke W, Rhea JM, Molinaro R. Challenges in implementing clinical liquid chromatography-tandem mass spectrometry methods - seeing the light at the end of the tunnel. J Mass Spectrom 2013 Jul;48(7):755-67.

6. Elbireer A, Le Chasseur J, Jackson B. Improving laboratory data entry quality using Six Sigma. Int J Health Care Qual Assurance 2013 July;26(6):496-509.
Key words: laboratory data, data entry, Six Sigma
no PMID available

7. Gonzalez-Roibon N, Katz B, Chaux A, Sharma R, Munari E, Faraj SF, Illei PB, Torbenson M, Netto GJ. Immunohistochemical expression of SALL4 in hepatocellular carcinoma, a potential pitfall in the differential diagnosis of yolk sac tumors. Hum Pathol 2013 Jul;44(7):1293-9.
Key words: immunohistochemistry, hepatocellular carcinoma, differential diagnosis, yolk sac tumor

8. Kanda M, Knight S, Topazian M, Syngal S, Farrell J, Lee J, Kamel I, Lennon AM, Borges M, Young A, Fujiwara S, Seike J, Eshleman J, Hruban RH, Canto MI, Goggins M. Mutant GNAS detected in duodenal collections of secretin-stimulated pancreatic juice indicates the presence or emergence of pancreatic cysts. Gut. 2013 Jul;62(7):1024-33.
Key words: GNAS, duodenum, secretin, pancreatic cysts

9. Laeyendecker O, Piwowar-Manning E, Fiamma A, Kulich M, Donnell D, Bassuk D, Mullis CE, Chin C, Vallari A, Hackett J, Jr., Clarke W, Marzinke M, Szekeres G, Gray G, Richter L, Mbwambo J, Chariyalertsak S, Chingono A, Celantano D, Morin SF, Sweat M, Coates T, Eshleman SH. Estimation of HIV incidence in a large, community-based, randomized clinical trial: NIMH Project Accept (HIV Prevention Trials Network 043). PLoS ONE 2013 July11;8(7): e68349.
Key words: HIV, clinical trial, prevention

10. Lee SY, Kang TH, Knoff J, Huang Z, Soong RS, Alvarez RD, Hung CF, Wu TC. Intratumoral injection of therapeutic HPV vaccinia vaccine following cisplatin enhances HPV-specific antitumor effects. Cancer Immunol Immunother. 2013 Jul;62(7):1175-85.
Key words: HPV, vaccine, cisplatin

11. Li A, Yu J, Kim H, Wolfgang CL, Canto MI, Hruban RH, Goggins M. MicroRNA array analysis finds elevated serum miR-1290 accurately distinguishes patients with low-stage pancreatic cancer from healthy and disease controls. Clin Cancer Res. 2013 Jul 1;19(13):3600-10.
Key words: Pancreatic cancer, marker, mir-1290, microRNA, serum

12. Munfus-McCray D, Cui M, Zhang Z, Gabrielson E, Askin F, Li QK. Comparison of EGFR and KRAS mutations in primary and unpaired metastatic lung adenocarcinoma with potential chemotherapy effect. Hum Pathol. 2013 Jul;44(7):1286-92.
Key words: EGFR, KRAS, lung adenocarcinoma, chemotherapy

13. Redd AD, Quinn TC, Tobian AAR. Frequency and Implications of HIV Superinfection. Lancet Infecti Dis. 2013 Jul;13(7):622-8.
Key words: HIV, superinfection

14. Yap KL, Shah PS, Bolon B, Wu RC, Gao M, Wang F, Faiola F, Huso D, Wang TL, Wang JL, Shih IM. Loss of NAC1 expression is associated with defective cell fate specification and bony patterning in the murine vertebral axis. PLoS One. 2013 Jul;8:e69099.
Key words: NAC1 expression, cell fate specification, bony patterning

15. Woodworth GF, Garzon-Muvdi T, Ye X, Blakeley JO, Weingart JD, Burger PC. Histopathological correlates with survival in reoperated glioblastomas. J Neurooncol. 2013 Jul;113(3):485-93.
Key words: histopathology, glioblastoma
PMID: 23666202

1. Babatz TD, Burns KH. Functional impact of the human mobilome. Curr Opin Genet Dev. 2013 Jun;23(3):264-70.
Key words: mobilome, retrotransposons
PMID: 23523050

2. Bishop JA, Ogawa T, Stelow EB, Moskaluk CA, Koch WM, Pai SI, Westra WH. Human papillomavirus-related carcinoma with adenoid cystic-like features: a peculiar variant of head and neck cancer restricted to the sinonasal tract. Am J Surg Pathol. 2013 Jun;37(6):836-44.
Key words: human papillomavirus, carcinoma, adenoid
PMID: 23598962

3. Bishop JA, Zhang W, Ioffe OB, Ali Z. Aspiration cytopathology of peripancreatic space: a clinicoradiologic and cytopathologic analyses of 42 cases. Korean J Pathol. 2013 Jun;47(3):258-64.
Key words: Peripancreatic space, cytopathology, fine needle aspiration, adenocarcino

4. Chu Q, Orr BA, Semenkow S, Bar EE, Eberhart CG. Prolonged inhibition of glioblastoma xenograft initiation and clonogenic growth following in vivo notch blockade. Clin Cancer Res. 2013 Jun 15;19(12):3224-33.
Key words: glioblastoma, xenograft, notch blockade

5. Cimino-Mathews A, Subhawong AP, Elwood H, Warzecha HN, Sharma R, Park BH, Taube JM, Illei PB, Argani P. Neural crest transcription factor Sox10 is preferentially expressed in triple-negative and metaplastic breast carcinomas. Hum Pathol. 2013 Jun;44(6):959-65.
Key words: Sox 10, breast carcinoma, metaplastic carcinoma, basal-like carcinoma, myoepithelial

6. Georgiades C, Rodriguez R, Azene E, Weiss C, Chaux A, Gonzalez-Roibon N, Netto G. Determination of the nonlethal margin inside the visible "ice-ball" during percutaneous cryoablation of renal tissue. Cardiovasc Intervent Radiol. 2013 Jun;36(3):783-90.
Key words: cryoablation, renal tissue

7. Jackson JB, Tao X, Sneed L, Humphrey-Carothers F, Bernacki E. Cost of annual tuberculosis screening of healthcare workers with negative tuberculin skin test results. Infect Control Hosp Epidemiol. 2013 Jun;34(6):642-3.
Key words: tuberculosis, screening, skin test

8. Li Y, Zheng Y, Izumi K, Ishiguro H, Ye B, Li F, Miyamoto H. Androgen activates ?-catenin signaling in bladder cancer cells. Endocr Relat Cancer. 2013 June 1;20(3):293-304.
Key words: androgen receptor, antiandrogen, bladder cancer, TCF/LEF, Wnt/?-catenin

9. Olson MT, Breaud A, Harlan R, Emezienna N, Schools S, Yergey AL, Clarke W. Alternative calibration strategies for the clinical laboratory: application to Nortriptyline therapeutic drug monitoring. Clin Chem. 2013 Jun;59(6):920-7.
Key words: Mass spectrometer, calebration, regulations and standards, therapeutic drug monitoring\
PMID: 23426427

10. Savage WJ, Tobian AA, Savage JH, Wood RA, Schroeder JT, Ness PM. Scratching the surface of allergic transfusion reactions. Transfusion.2013 Jun;53(6):1361-71.
Key words: allergic reaction, transfusion
PMID: 22998777

11. Shinohara DB, Vaghasia AM, Yu SH, Mak TN, Brüggemann H, Nelson WG, De Marzo AM, Yegnasubramanian S, Sfanos KS. A mouse model of chronic prostatic inflammation using a human prostate cancer-derived isolate of Propionibacterium acnes. Prostate. 2013 Jun;73(9):1007-15.
Key words: prostate, propionibacterium acnes, inflammation, mouse model
PMID: 23389852

12. Tobian AA, Grabowski MK, Kigozi G, Redd AD, Eaton KP, Serwadda D, Cornish TC, Nalugoda F, Watya S, Buwembo D, Nkale J, Wawer MJ, Quinn TC, Gray RH. Human papillomavirus clearance in men is associated with HIV acquisition and increased foreskin dendritic cell density in Rakai, Uganda. J Infect Dis. 2013 Jun;207(11):1713-22.
Key words: human papillomavirus, HIV, foreskin, Uganda

13. Vandenbussche CJ, Khouri N, Sbaity E, Tsangaris TN, Vang R, Tatsas A, Cimino-Mathews A, Argani P. Borderline atypical ductal hyperplasia/low-grade ductal carcinoma in situ on breast needle core biopsy should be managed conservatively. Am J Surg Pathol. 2013 Jun;37(6):913-23.
Key words: breast, carcinoma in situ, atypical duct hyperplasia, needle biopsy

14. Wang J, Liu J, Yao F, Wen G, Li J, Huang Y, Lü Y, Wen X, Wright D, Yu Q, Guo N, Ness P, Shan H; NHLBI Retrovirus Epidemiology Donor Study-II (REDS-II) and International Component. Prevalence, incidence, and residual risks for transfusion-transmitted human immunodeficiency virus Types 1 and 2 infection among Chinese blood donors. Transfusion. 2013 Jun;53(6):1240-9.
Key words: transfusion, HIV, China, blood donor

PMID: 23113801

15. Zheng G, Ettinger DS, Maleki Z. Utility of the quantitative Ki-67 proliferation index and CD56 together in the cytologic diagnosis of small cell lung carcinoma and other lung neuroendocrine tumors. Acta Cytol. 2013 May-June;57(3):281-90.
PMID: 23635388

1. Barin JG, Ciháková D. Control of inflammatory heart disease by CD4(+) T cells. Ann N Y Acad Sci. 2013 May;1285(1):80-96.
Key words: inflammatory heart disease, CD4+ T cells
PMID: 23692566

2. Brimo F, Montironi R, Egevad L, Erbersdobler A, Lin DW, Nelson JB, Rubin MA, van der Kwast T, Amin M, Epstein JI. Contemporary grading for prostate cancer: Implications for patient care. Eur Urol. 2013 May;63:892-901.
Key words: prostate cancer; Gleason grade
PMID: 23092544

3. Bishop JA, Yonescu R, Batista DA, Westra WH, Ali SZ. Cytopathologic features of mammary analogue secretory carcinoma. Cancer Cytopathol. 2013 May;121(5):228-33.
Key words: mammary analogue secretory carcinoma, cytopathology
PMID: 23042752

4. Elbireer AM, Jackson JB, Sendargire H, Opio A, Bagenda D, Amukele TK. The good, the bad, and the unknown: quality of clinical laboratories in Kampala, Uganda. PLoS ONE. 2013 May;8(5):e64661.
Key words: Uganda, clinical laboratories
PMID: 23737993

5. Kent OA, Fox-Talbot K, Halushka MK. RREB1 repressed miR-143/145 modulates KRAS signaling through downregulation of multiple targets. Oncogene. 2013 May 16;32(20):2576-85.
Key words: KRAS, RREB1, signaling
PMID: 22751122

6. Kurman RJ, Visvanathan K, Shih IeM. Bokhman's dualistic model of endometrial carcinoma. Revisited. Gynecol Oncol. 2013 May;129(2):271-2.
Key words: endometrial carcinoma
PMID: 23582581

7. Mak TN, Yu SH, De Marzo AM, Brüggemann H, Sfanos KS. Multilocus sequence typing (MLST) analysis of Propionibacterium acnes isolates from radical prostatectomy specimens. Prostate. 2013 May;73(7):770-7.
Key words: prostate cancer; inflammation; Propionibacterium acnes; MLST; infection
PMID: 23184509

8. Maleszewski JJ, Murray DL, Dispenzieri A, Grogan M, Pereira NL, Jenkins SM, Judge DP, Caturegli P, Vrana JA, Theis JD, Dogan A, Halushka MK. Relationship between monoclonal gammopathy and cardiac amyloid type. Cardiovasc Pathol. 2013 May-Jun;22(3):189-94.
Key words: monoclonal gammopathy, cardiac amyloid
PMID: 23102805

9. Netto GJ. Clinical applications of recent molecular advances in urologic malignancies: no longer chasing a "mirage"? Adv Anat Pathol. 2013 May;20(3):175-203.
Key words: urologic malginancy
doi: 10.1097/PAP.0b013e3182863f80
PMID: 23574774

10. Nguyen DN, Heaphy CM, de Wilde RF, Orr BA, Odia Y, Eberhart CG, Meeker AK, Rodriguez FJ. Molecular and morphologic correlates of the alternative lengthening of telomeres phenotype in high-grade astrocytomas. Brain Pathol 2013 May;23(3):237-43.
Key words: telomeres, phenotype, astrocytomas
PMID: 22928601

11. Pierorazio PM, Walsh PW, Partin AW, Epstein JI. Prognostic Gleason grade grouping: data based on the modified Gleason scoring system. BJU Int 2013 May;111:753-60.
Key words: Gleason grading, prostate cancer
PMID: 23464824

12. Ruzevick J, Olivi A, Westra WH. Metastatic squamous cell carcinoma to the brain: an unrecognized pattern of distant spread in patients with HPV-related head and neck cancer. J Neurooncol. 2013 May;112(3):449-54.
Key words: metastatic squamous cell carcinoma, brain cancer, HPV
PMID: 23408186

13. Vandenbussche CJ, Gocke CD, Li QK. Fine-needle aspiration of metastatic papillary thyroid carcinoma found in the liver. Diagn Cytopathol. 2013 May;41(5):418-24.
Key words: fine-needle aspiration, papillary thyroid carcinoma, liver cancer;jsessionid=
PMID: 22362717

1. Diolombi M, Ross HM, Mercalli F, Sharma R, Epstein JI. Nephrogenic adenoma: a report of 3 unusual cases infiltrating into perinephric adipose tissue. Am J Surg Pathol 2013 Apr;37(4):532-8.
Key words: nephrogenic adenoma,renal pevis

2. Fogel J, Mwatha A, Richardson P, Brown E, Chipato T, Alexandre M, Moodley D, Elbireer A, Mirochnick M, George K, Mofenson LM, Zwerski S, Coovadia HM, Eshleman SH. Impact of maternal and infant antiretroviral drug regimens on drug resistance in HIV-infected breastfeeding infants. Pediatr Infect Dis J 2013 Apr;32(4):e164-e169.
Key words: HIV, infant, antiretroviral, drug, breastfeeding
PMID: 23249916

3. Gonzalez-Roibon ND, Chaux A, Al-Hussain T, Osunkoya AO, Bezerra SM, Hicks J, Epstein JI, Netto GJ. Dysregulation of mammalian target of rapamycin pathway in plasmacytoid variant of urothelial carcinoma of the urinary bladder. Hum Pathol 2013 Apr;44(4):612-22.
PMID: 23084634

4. Lee RW, Bodurtha J, Cohen J, Fatemi A, Batista D. Deletion 12p12 involving SOX5 in two children with developmental delay and dysmorphic features. Pediatr Neurol 2013 Apr;48(4):317-20.
Key words: SOX5, 12p12, microarray, chondrogenesis, microdeletion
PMID: 23498568

5. Lewis GH, Wang H, Bellizzi AM, Klein AP, Askin FB, Schwartz LE, Schulick RD, Wolfgang CL, Cameron CL, O'Reilly EM, Yu KH, Hruban RH. Prognosis of minimally invasive carcinoma arising in mucinous cystic neoplasms of the pancreas. Am J Surg Pathol 2013 Apr;37(4):601-5.
Key words: pancreas, mucinous cystic neoplasm

6. Lotan TL, Gumuskaya B, Rahimi H, Hicks JL, Iwata T, Robinson BD, Epstein JI, De Marzo AM. Cytoplasmic PTEN protein loss distinguishes intraductal carcinoma of the prostate from high-grade prostatic intraepithelial neoplasia. Mod Pathol 2013 Apr;26(4):587-603.

7. Lyons JL, Roos KL, Marr KA, Neumann H, Trivedi JB, Kimbrough DJ, Steiner L, Thakur KT, Harrison DM, Zhang SX. Cerebrospinal fluid (1,3) ?-D-glucan detection as an aid to diagnose iatrogenic fungal meningitis. J Clin Microbiol 2013 April;51(4):1285-7.
Key words: fungal meningitis, outbreak, cerebrospinal fluid, beta-D-glucan
PMID: 23363831

8. Shah P, Yang S, Sun S, Aiyetan P, Yarema KJ, Zhang H. Mass spectrometric analysis of sialylated glycans with use of solid-phase labeling of sialic acids. Anal Chem 2013 Apr 2;85(7):3606-13.
PMID: 23445396

9. Sharma P, Montgomery E. Gastrointestinal dysplasia. Pathology JRCPA Apr 2013;45(3):273-85.


10. Takemoto CM, Streiff MB, Shermock KM, Kraus PS, Chen J, Jani J, Kickler T. Am J Clin Pathol. 2013 Apr;139(4):450-6.

11. Treml A, King KE. Red blood cell alloimmunization: lessons from sickle cell disease. Transfusion. 2013 Apr;53(4):692-5.;jsessionid=


1. Amukele TK, Soko D, Katundu P, Kamanga M, Sun J, Kumwenda NI, Taha TE. Vitamin D levels in Malawian infants from birth to 24 months. Arch Dis Child. 2013 Mar;98(3):180-3.
Key words: vitamin D, Malawi, infants
PMID: 23220204

2. Beierl K, Tseng LH, Beierl R, Haley L, Gocke CD, Eshleman JR, Lin MT. Detection of minor clones with internal tandem duplication mutations of FLT3 gene in acute myeloid leukemia using delta-PCR. Diagn Mol Pathol. 2013 Mar;22(1):1-9.
Key words: internal tandem duplication, FLT3 gene, acute myeloid leukemia, delta-PCR, minimal residual disease
PMID: 23370424

3. Bishop JA. Unmasking MASC: bringing to light the unique morphologic, immunohistochemical and genetic features of the newly recognized mammary analogue secretory carcinoma of salivary glands. Head Neck Pathol. 2013 Mar;7(1):35-9.
PMID: 23459839

4. Breaud AR, Henemyre-Harris CL, Schools S, Emezienna N, Clarke W. Rapid quantification of the aminoglycoside arbekacin in serum using high performance liquid chromatography-tandem mass spectrometry. Clin Chim Acta. 2013 Mar 15;418:102-6.
PMID: 23333924

5. Farley JE, Ross T, Krall J, Hayat M, Caston-Gaa A, Perl T, Carroll KC. Prevalence, risk factors, and molecular epidemiology of methicillin-resistant Staphylococcus aureus nasal and axillary colonization among psychiatric patients on admission to an academic medical center. Am J Infect Control. 2013 Mar;41(3):199-203.
PMID: 22999771

6. Holmes BJ, Castelino-Prabhu S, Rosenthal DL, Ali SZ. Xanthogranuloma of bone: a challenging imitator of malignancy. Acta Cytol. 2013 Mar-Apr;57(2):198-202.

7. Kamiyama H, Rauenzahn S, Shim JS, Karikari CA, Feldmann G, Hua L, Kamiyama M, Schuler FW, Lin MT, Beaty RM, Karanam B, Liang H, Mullendore ME, Mo G, Hidalgo M, Jaffee E, Hruban RH, Jinnah HA, Roden RB, Jimeno A, Liu JO, Maitra A, Eshleman JR. Personalized chemotherapy profiling using cancer cell lines from selectable mice. Clin Cancer Res. 2013 Mar 1;19(5):1139-46.

8. Lee S, Han JS, Chang A, Ross HM, Montironi R, Yorukoglu K, Lane Z, Epstein JI. Small cell-like change in prostatic intraepithelial neoplasia, intraductal carcinoma, and invasive prostatic carcinoma: a study of 7 cases. Hum Pathol. 2013 Mar;44(3):427-31.

9. Makohon-Moore A, Iacobuzio-Donahue CA. Considerations for sequencing analyses of pancreatic cancer progression and metastasis. Methods Mol Biol. 2013;980:121-9.

10. Olson MT, Nuransoy A, Ali SZ. Malignant pleural effusion resulting from metastasis of thyroid primaries: a cytomorphological analysis. Acta Cytol. 2013 Mar-Apr;57(2):177-83.
Key words: Thyroid, papillary thyroid carcinoma, serous cavity effusion, natural history

11. Rodi? N, Burns KH. Long interspersed element-1 (LINE-1): passenger or driver in human neoplasms? PLoS Genet. 2013 Mar;9(3):e1003402.

12. Sheu JJ, Choi JH, Guan B, Tsai FJ, Hua CH, Lai MT, Wang TL, Shih IeM. Rsf-1, a chromatin remodelling protein, interacts with cyclin E1 and promotes tumour development. J Pathol 2013 Mar;229(4):559-68.
Key words: ovarian cancer, Rsf-1, chromatin remodeling, cyclin E;jsessionid=

13. Tobian AAR, Grabowski MK, Kigozi G, Gravitt PE, Eaton K, Serwadda D, Nalugoda F, Wawer MJ, Quinn TC, Gray RH. High-risk human papillomavirus prevalence is associated with HIV infection among heterosexual men in Rakai, Uganda. Sex Transm Infect. 2013 Mar;89(2):122-7.
PMID: 22628661

14. Toll AD, Wakely PE Jr, Ali SZ. Acral myxoinflammatory fibroblastic sarcoma: cytopathologic findings on fine-needle aspiration. Acta Cytol. 2013 Mar-Apr;57(2):134-8.

15. Yegnasubramanian S, Maitra A. Aiming for the outliers: cancer precision medicine through targeting kinases with extreme expression. Cancer Discov. 2013 Mar;3(3):252-4.

1. Bell WR, Dalton JB, McCall CM, Karram S, Pearce DT, Memon W, Lee R, Carroll KC, Lyons JL, Gireesh ED, Trivedi JB, Cettomai D, Smith BR, Chang T, Tochen L, Ratchford JN, Harrison DM, Ostrow LW, Stevens RD, Chen L, Zhang SX. Iatrogenic Exserohilum infection of the central nervous system: mycological identification and histopathological findings. Mod Pathol. 2013 Feb;26(2):166-70.
Key words: Exserohilum, fungal meningitis
PMID: 23222492

2. Bishop JA, Guo TW, Smith DF, Wang H, Ogawa T, Pai SI, Westra WH. Human papillomavirus-related carcinomas of the sinonasal tract. Am J Surg Pathol. 2013 Feb;37(2):185-92.
Key words: human papillomavirus, carcinomas, sinonasal tract
PMID: 23095507

3. Caturegli P, De Remigis A, Chuang K, Dembele M, Iwama A, Iwama S. Hashimoto's thyroiditis: celebrating the centennial through the lens of The Johns Hopkins Hospital Surgical Pathology records. Thyroid. 2013 Feb;23(2):142-50.
Key words: Hashimoto thyroiditis; Johns Hopkins Hospital; centennial; surgical pathology
PMID: 23151083

4. Kacker S, Frick KD, Gaydos CA, Tobian AAR. Male circumcision cost-effective articles ignore methodological problems and ethical concerns - reply. JAMA Pediatr. 2013 Feb;167(2):198-200.
PMID: 23381458

5. Kryvenko ON, Roquero L, Gupta NS, Lee MW, Epstein JI. Low-grade clear cell renal cell carcinoma mimicking hemangioma of the kidney: a series of 4 cases. Arch Pathol Lab Med. 2013 Feb;137(2):251-4.
Key words: renal cell carcinoma, hemangioma
PMID: 23368867

6. Lee S, Han JS, Ross HM, Epstein JI. Massive localized lymphedema of the male external genitalia: A clinicopathologic study of 7 cases. Hum Pathol. 2013 Feb;44(2):277-81.
Key words: scrotum, lymphedema
PMID: 22995331

7. Marzinke MA, Breaud AR, Clarke W. The development and clinical validation of a turbulent-flow liquid chromatography-tandem mass spectrometric method for the rapid quantitation of docetaxel in serum. Clin Chim Acta. 2013 Feb 18;417:12-8.
Key words: docetaxel, mass spectrometry, validation, quantitation, turbo-flow chromatography
PMID: 23200823

8. Marzinke MA, Choi CH, Chen L, Shih IeM, Chan DW, Zhang H. Proteomic analysis of temporally stimulated ovarian cancer cells for biomarker discovery. Mol Cell Proteomics. 2013 Feb;12(2):356-68.
Key words: Ovarian, proteomics, biomarker, cancer, OVCAR-3
PMID: 23172893

9. Subhawong AP, Subhawong TK, Vandenbussche CJ, Siddiqui MT, Ali SZ. Lymphoproliferative disorders of the kidney on fine-needle aspiration: cytomorphology and radiographic correlates in 33 cases. Acta Cytol. 2013 Feb;57(1):19-25.
PMID: 23221130

10. Tavora F, Kryvenko ON, Epstein JI. Mesenchymal tumours of the bladder and prostate: an update. Pathology. 2013 Feb;45(2):104-15.
Key words: sarcoma, bladder, prostate, leiomyoma, leiomyosarcoma

11. Yemelyanova A, Gravitt PE, Ronnett BM, Rositch AF, Ogurtsova A, Seidman J, Roden RB. Immunohistochemical detection of human papillomavirus capsid proteins L1 and L2 in squamous intraepithelial lesions: potential utility in diagnosis and management. Mod Pathol. 2013 Feb;26(2):268-74.
Key words: human papillomavirus, capsid proteins, squamous intraepithelial lesions
PMID: 22996373

12. Zheng G, Chaux A, Sharma R, Netto G, Caturegli P. LMP2, a novel immunohistochemical marker to distinguish renal oncocytoma from the eosinophilic variant of chromophobe renal cell carcinoma. Exp Mol Pathol. 2013 Feb;94(1):29-32.
PMID: 22705098

13. Zheng G, Martignoni G, Antonescu C, Montgomery E, Eberhart C, Netto G, Taube J, Westra W, Epstein JI, Lotan T, Maitra A, Gabrielson E, Torbenson M, Iacobuzio-Donahue C, Demarzo A, Shih IeM, Illei P, Wu TC, Argani P. A broad survey of cathepsin k immunoreactivity in human neoplasms. Am J Clin Pathol. 2013 Feb;139(2):151-9.

1. Asnaghi L, Handa JT, Merbs SL, Harbour JW, Eberhart CG. A role for Jag2 in promoting uveal melanoma dissemination and growth. Invest Ophthalmol Vis Sci. 2013 Jan 9;54(1):295-306.
Key words: Uveal Melanoma, Jagged 2, Notch, invasion

2. Chang CL, Hsu YT, Wu CC, Lai YZ, Wang C, Yang YC, Wu TC, Hung CF. Dose-dense chemotherapy improves mechanisms of antitumor immune response. Cancer Res. 2013 Jan 1;73(1):119-27.
Key words: chemotherapy, dose dense, antitumor immunity, drug-resistance, ovarian cancer
PMID: 23108141

3. Chaux A, Compérat E, Varinot J, Hicks J, Lecksell K, Solus J, Netto GJ. High levels of phosphatase and tensin homolog expression are associated with tumor progression, tumor recurrence, and systemic metastases in pT1 urothelial carcinoma of the bladder: a tissue microarray study of 156 patients treated by transurethral resection. Urology. 2013 Jan;81(1):116-22.
PMID: 23273076

4. Cousins MM, Donnell D, Eshleman SH. Impact of mutation type and amplicon characteristics on genetic diversity measures generated using a high-resolution melting diversity assay. J Mol Diagn. 2013 Jan;15(1):130-7.
Key words: HIV, mutation, high resolution melting
PMID: 23178437

5. Eshleman SH, Hughes JP, Laeyendecker O, Wang J, Brookmeyer R, Johnson-Lewis L, Mullis CE, Hackett J Jr, Vallari AS, Justman J, Hodder S. Use of a multifaceted approach to analyze HIV incidence in a cohort study of women in the United States: HIV Prevention Trials Network 064 Study. J Infect Dis. 2013 Jan;207(2):223-31.
Key words: HIV, incidence, women, United States
PMID: 23129758

6. Ho CY, Bar E, Giannini C, Marchionni L, Karajannis MA, Zagzag D, Gutmann DH, Eberhart CG, Rodriguez FJ. MicroRNA profiling in pediatric pilocytic astrocytoma reveals biologically relevant targets, including PBX3, NFIB, and METAP2. Neuro Oncol. 2013 Jan;15(1):69-82.
PMID: 23161775

7. Laeyendecker O, Brookmeyer R, Cousins MM, Mullis CE, Konikoff J, Donnell D, Celum C, Buchbinder SP, Seage GR 3rd, Kirk GD, Mehta SH, Astemborski J, Jacobson LP, Margolick JB, Brown J, Quinn TC, Eshleman SH. HIV Incidence Determination in the United States: A multiassay approach. J Infect Dis. 2013 Jan;207(2):232-9.
Key words: HIV, incidence, cross-sectional, multi-assay algorithm, United States
PMID: 23129760

8. Li QK, Gabrielson E, Askin F, Chan DW, Zhang H. Glycoproteomics using so-called 'fluid-biopsy' specimens in the discovery of lung cancer biomarkers. Promise and challenge. Proteomics. Clin Appl 2013 Jan;7(1-2):55-69.
Key words: Glycoproteomics, glycoproteins, lung cancer, biomarker, body fluid

9. Maeda D, Shih IeM. Pathogenesis and the role of ARID1A mutation in endometriosis-related ovarian neoplasms. Adv Anat Pathol. 2013 Jan;20(1):45-52.
Key words: Ovarian cancer, ARID1A
PMID: 23232571

10. Maleki Z, Erozan Y, Geddes S, Li QK. Endorectal ultrasound-guided fine needle aspiration: A useful diagnostic tool for peri-rectal and intraluminal lesions. Acta Cytol. Jan 2013;57:9-18.
Key words: rectal lesions, fine needle aspiration
PMID: 23221104

11. Macgregor-Das AM, Iacobuzio-Donahue CA. Molecular pathways in pancreatic carcinogenesis. J Surg Oncol 2013 Jan;107(1):8-14.
Key words: pancreatic cancer, molecular pathways;jsessionid=
PMID: 22806689

12. Maniar KP, Ronnett BM, Vang R, Yemelyanova A. Coexisting high-grade vulvar intraepithelial neoplasia (VIN) and condyloma acuminatum: independent lesions due to different HPV types occurring in immunocompromised patients. Am J Surg Pathol. 2013 Jan; 37(1):53-60.
Key words: HPV, vulvar intraepithelial neoplasia, condyloma
PMID: 23026935

13. Rodriguez FJ, Lim KS, Bowers D, Eberhart CG. Pathological and molecular advances in pediatric low-grade astrocytoma. Annu Rev Pathol. 2013 Jan 24;8:361-79.
Key words: low-grade astrocytoma, pathology

14. Tobian AAR, Kigozi G, Wawer MJ, Serwadda D, Quinn TC, Gray RH. Herpes simplex virus type-2 (HSV-2) assay specificity and male circumcision to reduce HSV-2 acquisition. AIDS. 2013;27:147-9.
Key words: herpes virus, HSV-2, male circumcision
PMID: 23221430

15. Vang R, Shih IeM, Kurman RJ. Fallopian tube precursors of ovarian low- and high-grade serous neoplasms. Histopathology. 2013 Jan;62(1):44-58.
Key words: Fallopian tube, pathogenesis, serous, STIC;jsessionid=
PMID: 23240669

1. Ali SZ, Leteurtre E. The official nomenclature and terminologies in diagnostic cytopathology: history, evolution, applicability and future. Ann Pathol 2012 Dec;32(6):e3-7.
Key words: Cytopathology, terminology, nomenclature, history

2. Amin A, Epstein JI. Noninvasive micropapillary urothelial carcinoma: a clinicopathologic study of 18 cases. Hum Pathol 2012;43:2124-8.
Key words: urothelial carcinoma, micropapillary
PMID: 22939957

3. Bishop JA, Ma XJ, Wang H, Luo Y, Illei PB, Begum S, Taube JM, Koch WM, Westra WH. Detection of transcriptionally active high-risk HPV in patients with head and neck squamous cell carcinoma as visualized by a novel E6/E7 mRNA in situ hybridization method. Am J Surg Pathol 2012 Dec;36(12):1874-82.
Key words: HPV, squamous cell carcinoma, transcription
PMID: 23060353

4. Carter HB, Partin AW, Walsh PC, Trock BJ, Nelson WG, Coffet DS, Singer EA, Epstein JI. Gleason score 6 adenocarcinoma: Should it be labeled as cancer. JCO 2012Dec;30: 4294-6.
Key words: prostate adenocarcinoma, Gleason grade
PMID: 23032616

5. Chaux A, Schultz L, Albadine R, Hicks J, Kim JJ, Allaf ME, Carducci MA, Rodriguez R, Hammers HJ, Argani P, Reuter VE, Netto GJ. Immunoexpression status and prognostic value of mammalian target of rapamycin and hypoxia-induced pathway members in papillary cell renal cell carcinomas. Hum Pathol 2012 Dec;43(12):2129-37.
Key words: immunoexpression, rapamycin, hypoxia, renal cell carcinoma
PMID: 22542128

6. Cimino-Mathews A, Lin BM, Chang SS, Boahene KD, Bishop JA. Small cell carcinoma ex-pleomorphic adenoma of the parotid gland. Head Neck Pathol 2012 Dec;6(4):502-6.
Key words: small cell carcinoma; carcinoma ex-pleomorphic adenoma; parotid; salivary
PMID: 22736150

7. Cousins MM, Swan D, Margaret CA, Hoover DR, Eshleman SH. Analysis of HIV using a high resolution melting (HRM) diversity assay: automation of HRM data analysis enhances the utility of the assay for analysis of HIV incidence. PLoS One. 2012; 7(12):e51359.
Key words: HIV, genetic diversity, melting, incidence
PMID: 23240016

8. Cui Y, Brosnan JA, Blackford AL, Sur S, Hruban RH, Kinzler KW, Vogelstein B, Maitra A, Diaz LA Jr, Iacobuzio-Donahue CA, Eshleman JR. Genetically defined subsets of human pancreatic cancer show unique in vitro chemosensitivity. Clin Cancer Res 2012 Dec 1;18(23):6519-30.
Key words: pancreatic cancer, chemosensitivity
PMID: 22753594

9. Kohr MJ, Roof SR, Zweier JL, Ziolo MT. Modulation of myocardial contraction by peroxynitrite.
Front Physiol 2012 Dec;3:468.
Key words: myocyte, peroxynitrite, nitric oxide synthase, calcium
PMID: 23248603

10. Kuhn E, Kurman RJ, Soslow RA, Han G, Sehdev AS, Morin PJ, Wang TL, Shih IeM. The diagnostic and biological implications of laminin expression in serous tubal intraepithelial carcinoma. Am J Surg Pathol 2012 Dec;36(12):1826-34.
Key words: ovarian cancer, laminin, precusor
PMID: 22892598

11. Kryvenko ON, Epstein JI. Histologic criteria and pitfalls in the diagnosis of lymphovascular invasion in radical prostatectomy specimens. Am J Surg Pathol 2012 Dec;36:1865-73.
Key words: prostate adenocarcinoma; lymphovascular invasion; radical prostatectomy
PMID: 23154772

12. Maleki Z, Erozan Y, Geddes S, Li QK. Endorectal ultrasound-guided fine needle aspiration: A useful diagnostic tool for peri-rectal and intraluminal lesions. Acta Cytol 2012 Dec 6;57(1):9-18.
Key words: fine needle aspiration, peri-rectal lesions, intraluminal lesions
PMID: 23221104

13. Miller FW, Pollard KM, Parks CG, Germolec DR, Leung PS, Selmi C, Humble MC, Rose NR. Criteria for environmentally associated autoimmune diseases. J Autoimmun. 2012 Dec;39(4):253-8.
Key words: autoimmune disease, environmental risk factors, criteria, environment, pollution
PMID: 22771005

14. Pagano MB, Hobbs W, Linenberger M, Delaney M. Plasma and red cell exchange transfusions for
erythropoietic protoporphyria: a case report and review of the literature. J Clin Apher 2012 Dec;27(6):336-41
Key words: porphyria, liver failure, liver transplant, transfusion therapy, plasma exchange, red blood cell exchange
PMID: 22997063

15. Reynolds SJ, Laeyendecker O, Nakigozi G, Gallant JE, Huang W, Hudelson SE, Quinn TC, Newell K, Serwadda D, Gray RH, Wawer MJ, Eshleman SH. Antiretroviral drug susceptibility among HIV-infected adults failing antiretroviral therapy in Rakai, Uganda. AIDS Res Hum Retroviruses 2012 Dec;28(12):1739-44.
Key words: HIV, Africa, antiretroviral drug, resistance
PMID: 22443282

1. Amukele TK, Michael K, Hanes M, Miller RE, Jackson JB. External quality assurance performance of clinical research laboratories in sub-saharan Africa. Am J Clin Pathol 2012 Nov;138(5):720-3.

2. Chaux A, Peskoe SB, Gonzalez-Roibon N, Schultz L, Albadine R, Hicks J, De Marzo AM, Platz EA, Netto GJ. Loss of PTEN expression is associated with increased risk of recurrence after prostatectomy for clinically localized prostate cancer. Mod Pathol 2012 Nov;25(11):1543-9.

3. Crane CH, Iacobuzio-Donahue CA. Keys to personalized care in pancreatic oncology. J Clin Oncol 2012 Nov 20;30(33):4049-950.

4. James MM, Wang L, Donnell D, Cousins MM, Barlow-Mosha L, Fogel J, Towler WI, Agwu AL, Bagenda D, Mubiru M, Musoke P, Eshleman SH. Use of a high resolution melting (HRM) assay to analyze HIV diversity in HIV-infected Ugandan children. Ped Infect Dis 2012 Nov;31(11):e222-e228.
Key words: HIV, children, diversity, Uganda

5. Jerrard GA, Liu J, Case R, Motevalli M, Bolton SG, King KE, Beigel J, Jackson JB. Implications of weight and body mass index for plasma donation and health. ISRN Hematology;2012(2012),Article ID 937585, 5 pages.

6. McDonald OG, Maitra A, Hruban RH. Human correlates of provocative questions in pancreatic pathology. Adv Anat Pathol 2012 Nov;19(6):351-62.
Key words: pancreatic cancer, genetics, stem cells, pathology

7. Meriden Z, Marr K, Lederman HM, Illei PB, Villa K, Riedel S, Carroll KC, Zhang SX. Ochrochonis gallopava infection in a patient with chronic granulomatous disease. Med Mycol 2012 Nov;50(8):890-6.
Key words: Chronic granulomatous disease, ochrochonis gallopava, dematiaceous fungi, invasive fungal infection, filamentous fungi

8. Miyamoto H, Izumi K, Yao JL, Li Y, Yang Q, McMahon LA, Gonzalez-Roibon N, Hicks DG, Tacha D, Netto GJ. GATA binding protein 3 is down-regulated in bladder cancer yet strong expression is an independent predictor of poor prognosis in invasive tumor. Hum Pathol 2012 Nov;43(11):2033-40.

9. Rodriguez FJ, Perry A, Rosenblum MK, Krawitz S, Cohen KJ, Lin D, Mosier S, Lin MT, Eberhart CG, Burger PC. Disseminated oligodendroglial-like leptomeningeal tumor of childhood: a distinctive clinicopathologic entity. Acta Neuropathol 2012 Nov;124(5):627-41.

10. Salaria SN, Streppel MM, Lee LA, Iacobuzio-Donahue CA, Montgomery EA. Sessile serrated adenomas: high-risk lesions? Hum Pathol 2012 Nov;43(11):1808-14.

11. Toubaji A, Sutcliffe S, Chaux A, Lecksell K, Hicks J, De Marzo AM, Platz EA, Netto GJ. Immunohistochemical expression of minichromosome maintenance complex protein 2 predicts biochemical recurrence in prostate cancer: a tissue microarray and digital imaging analysis-based study of 428 cases. Hum Pathol 2012 Nov;43(11):1852-65.

12. Wood LD, Hruban RH. Pathology and molecular genetics of pancreatic neoplasms. Cancer J 2012 Nov;18 (6):492-501.
Key words: pancreatic cancer, genetics, pathology

13. Yachida S, White CM, Naito Y, Zhong Y, Brosnan JA, Macgregor-Das AM, Morgan RA, Saunders T, Laheru DA, Herman JM, Hruban RH, Klein AP, Jones S, Velculescu V, Wolfgang CL, Iacobuzio-Donahue CA. Clinical significance of the genetic landscape of pancreatic cancer and implications for identification of potential long-term survivors. Clin Cancer Res 2012 Nov;18(22):6339-47.

1. Bai H, Gayyed MF, Lam-Himlin DM, Klein AP, Nayar SK, Xu Y, Khan M, Argani P, Pan D, Anders RA. Expression of Yes-associated protein modulates Survivin expression in primary liver malignancies. Hum Pathol. 2012 Sep;43(9):1376-85.
Key words: yes-associated protein, surviving, liver malignancies

2. Bai H, Zhang N, Xu Y, Chen Q, Khan M, Potter JJ, Nayar SK, Cornish T, Alpini G, Bronk S, Pan D, Anders RA. Yes-associated protein regulates the hepatic response after bile duct ligation. Hepatology. 2012 Sep;56(3):1097-107.
Key words: yes-associated protein, bile duct ligation, hepatic response
PMID: 22886419

3. Caturegli P, De Remigis A, Ferlito M, Landek-Salgado MA, Iwama S, Tzou SC, Ladenson PW. Anatabine ameliorates experimental autoimmune thyroiditis. Endocrinology. 2012 Sep;153(9):4580-7.
Key words: thyroiditis, anatabine
PMID: 22807490

4. Chang CL, Hsu YT, Wu CC, Yang YC, Wang C, Wu TC, Hung CF. Immune mechanism of the antitumor effects generated by bortezomib. J Immunol. 2012 Sep 15;189(6):3209-20.
Key words: bortezomib, immune mechanism
PMID: 22896634

5. Chaux A, Brimo F, Gonzalez-Roibon N, Shah S, Schultz L, Rizk JM, Argani P, Hicks J, Netto GJ. Immunohistochemical evidence of dysregulation of the Mammalian target of rapamycin pathway in primary and metastatic pheochromocytomas. Urology. 2012 Sep;80(3):736.e7-736.e12.
Key words: rapamycin, pheochromocytoma
PMID: 22698476

6. Descipio C, Conlin L, Rosenfeld J, Tepperberg J, Pasion R, Patel A, McDonald MT, Aradhya S, Ho D, Goldstein J, McGuire M, Mulchandani S, Medne L, Rupps R, Serrano AH, Thorland EC, Tsai AC, Hilhorst-Hofstee Y, Ruivenkamp CA, Van Esch H, Addor MC, Martinet D, Mason TB, Clark D, Spinner NB, Krantz ID. Subtelomeric deletion of chromosome 10p15.3: Clinical findings and molecular cytogenetic characterization. Am J Med Genet A. 2012 Sep;158A(9):2152-61.
Key words: molecular cytogenetics, chromosomes;jsessionid=

7. Fu B, Yachida S, Morgan R, Zhong Y, Montgomery EA, Iacobuzio-Donahue CA. Clinicopathologic and genetic characterization of traditional serrated adenomas of the colon. Am J Clin Pathol. 2012 Sep;138(3):356-66.
Key words: colon, adenoma, clinicopathology
PMID: 22912351

8. Guo Z, Rudow G, Pletnikova O, Codispoti KE, Orr BA, Crain BJ, Duan W, Margolis RL, Rosenblatt A, Ross CA, Troncoso JC. Striatal neuronal loss correlates with clinical motor impairment in Huntington's disease. Mov Disord. 2012 Sep 15;27(11):1379-86.
Key words: putamen, subthalamic nucleus, medium spiny neurons, DARPP-32, stereology;jsessionid=

PMID: 22975850

9. Iacobuzio-Donahue CA. Personalized medicine in pancreatic cancer: prognosis and potential implications for therapy. J Gastrointest Surg. 2012 Sep;16(9):1651-2.
Key words: pancreatic cancer, personalized medicine
PMID: 22744639

10. Kuhn E, Kurman RJ, Sehdev AS, Shih IeM. Ki-67 labeling index as an adjunct in the diagnosis of serous tubal intraepithelial carcinoma. Int J Gynecol Pathol. 2012 Sep;31(5):416-22.
Key words: intraepithelial carcinoma, Ki-67


11. Landek-Salgado MA, Leporati P, Lupi I, Geis A, Caturegli P. Growth hormone and proopiomelanocortin are targeted by autoantibodies in a patient with biopsy-proven IgG4-related hypophysitis. Pituitary. 2012 Sep;15(3):412-9.
Key words: growth hormone, hypophysitis, proopiomelanocortin
PMID: 21861119

12. Matthaei H, Wylie D, Lloyd MB, Dal Molin M, Kemppainen J, Mayo SC, Wolfgang CL, Schulick RD, Langfield L, Andruss BF, Adai AT, Hruban RH, Szafranska-Schwarzbach AE, Maitra A. miRNA biomarkers in cyst fluid augment the diagnosis and management of pancreatic cysts. Clin Cancer Res. 2012 Sep 1;18(17):4713-24.
Key words: miRNA, cyst fluid, pancreatic cysts

13. Rodriguez FJ, Ligon AH, Horkayne-Szakaly I, Rushing EJ, Ligon KL, Vena N, Garcia DI, Cameron JD, Eberhart CG. BRAF Duplications and MAPK pathway activation are frequent in gliomas of the optic nerve proper. J Neuropathol Exp Neurol 2012 Sep;71(9):789-94.
Key words: BRAF, gliomas, optic nerve

14. Ross HM, Kryvenko O, Cowan J, Simko JP, Wheeler TM, Epstein JI. Do adenocarcinomas of the prostate with Gleason score (GS) <6 have the potential to metastasize to lymph nodes? Am J Surg Pathol. 2012 Sep;36(9):1346-52.
Key words: prostatic adenocarcinoma, lymph node metastases

PMID: 22531173

15. Yu J, Walter K, Omura N, Hong S-M, Young A, Li A, Vincent A, Goggins M. Unlike pancreatic cancer cells pancreatic cancer associated fibroblasts display minimal gene induction after 5-aza-2?-deoxycytidine. PLoS One. 2012 Sept;7(9):e43456.
Key words: pancreatic cancer associated fibroblast (CAF), methylation
PMID: 22984426

1. Aizire J, McConnell MS, Mudiope P, Mubiru M, Matovu F, Parsons TL, Elbireer A, Nolan M, Janoff EN, Fowler MG. Kinetics of nevirapine and its impact on HIV-1 RNA levels in maternal plasma and breast milk over time after perinatal single dose nevirapine. J Acquir Immune Defic Syndr 2012 Aug;60(5):483-8.
Key words: HIV, nevirapine, RNA, breast milk

2. Bishop JA, Westra WH. NUT midline carcinomas of the sinonasal tract. Am J Surg Pathol. 2012 Aug;36(8):1216-21.
Key words: NUT-1, sinonasal undifferentiated carcinoma, head and neck carcinoma
PMID: 22534723

3. Frevert U, Movila A, Nikolskaia OV, Raper J, Mackey ZB, Abdulla M, McKerrow J, Grab DJ. Early invasion of brain parenchyma by African trypanosomes. PLoS One. 2012 Aug;7(8):e43913.
Key words: brain parenchyma, African trypanosomes, sleeping sickness
PMID: 22952808

4. Hong SM, Vincent A, Kanda M, Leclerc J, Omura N, Borges M, Klein AP, Canto MI, Hruban RH, Goggins M. Genome-wide somatic copy number alterations in low-grade PanINs and IPMNs from individuals with a family history of pancreatic cancer. Clin Cancer Res 2012 Aug 15;18(16):4303-12.
Key words: genome, pancreatic cancer, pancreatic intraepithelial neoplasias, intraductal papillary mucinous neoplasms
PMID: 22723370

5. Iacobuzio-Donahue CA, Velculescu VE, Wolfgang CE, Hruban RH. Genetic basis of pancreas cancer development and progression: insights from whole-exome and whole-genome sequencing. Clin Cancer Res. 2012 Aug 15;18(16):4257-65.
Key words: pancreatic cancer, genetics

6. Iwama S, De Remigis A, Bishop JA, Kimura HJ, Caturegli P. Hurthle cells predict hypothyroidism in interferon-? transgenic mice of different genetic backgrounds. Endocrinology. 2012 Aug;153(8):4059-66.
Key words: Hurthle cells, transgenic mice, interferon-?

7. Laeyendecker O, Brookmeyer R, Oliver AE, Mullis CE, Eaton KP, Mueller AC, Jacobson LP, Margolick JB, Brown J, Rinaldo CR, Quinn TC, Eshleman SH. Factors associated with incorrect identification of recent HIV infection using the BED capture immunoassay. AIDS Res Hum Retroviruses. 2012 Aug;28(8):816-22.
Key words: HIV, BED capture immunoassay

8. Riedel S, Dionne K, Ellis C, Duffield A, Carroll KC, Parrish NM. Mycobacterium szulgai: an unusual cause of disseminated mycobacterial infections. Infection. 2012 Aug;40(4):463-8.
Key words: mycobacterium szulgai, infection
PMID: 22038111

9. Rodriguez FJ, Lewis-Tuffin LJ, Anastasiadis PZ. E-cadherin's dark side: Possible role in tumor progression.
Biochim Biophys Acta. 2012 Aug;1826(1):23-31.
Key words: E-cadherin, tumor progression

10. Subhawong AP, Ali SZ, Tatsas AD. Nodular lymphocyte-predominant Hodgkin lymphoma: Cytopathologic correlates on fine-needle aspiration. Cancer Cytopathol. 2012 Aug;120(4):254-60.
Key words: Hodgkin lymphoma, fine-needle aspiration, lymphocytes

11. Tatsas AD, Owens CL, Siddiqui MT, Hruban RH, Ali SZ. Fine-needle aspiration of intrapancreatic accessory spleen: cytomorphologic features and differential diagnosis. Cancer Cytopathol. 2012 Aug;120(4):261-8.
Key words: fine-needle aspiration, intrapancreatic accessory spleen

12. Tatsas AD, Phelan DF, Gravitt PE, Boitnott JK, Clark DP. Practice patterns in cervical cancer screening and human papillomavirus testing. Am J Clin Pathol. 2012 Aug;138(2):223-9.
Key words: Human papillomavirus, HPV, papanicolaou test, contesting

13. Webb TJ, Li X, Giuntoli RL 2nd, Lopez PH, Heuser C, Schnaar RL, Tsuji M, Kurts C, Oelke M, Schneck JP. Molecular identification of GD3 as a suppressor of the innate immune response in ovarian cancer. Cancer Res. 2012 Aug 1;72(15):3744-52.
Key words: GD3, immune response, ovarian cancer
PMID: 22649190

14. Westra WH. Detection of human papillomavirus in clinical samples. Otolaryngol Clin North Am. 2012 Aug;45(4):765-77.
Key words: p16, in-situ hybridization, head and neck cancer

15. Yap KL, Fraley SI, Thiaville MM, Jinawath N, Nakayama K, Wang J, Wang TL, Wirtz D, Shih IeM. NAC1 is an actin-binding protein that is essential for effective cytokinesis in cancer cells. Cancer Res 2012 Aug 15;72(16):4085-96.
Key words: NAC1, actin, cancer, cytokinesis

1. Arnold CA, Moreira RK, Lam-Himlin D, De Petris G, Montgomery E. Whipple disease a century after the initial description: increased recognition of unusual presentations, autoimmune comorbidities, and therapy effects. Am J Surg Pathol. 2012 Jul;36(7):1066-73.

2. Bagnasco SM. Protein kinase C? comes to the rescue of aquaporin 2. Am J Physiol Renal Physiol. 2012 Jul;303(1):F35-6.

3. Bishop JA, Wu G, Tufano RP, Westra WH. Histological patterns of locoregional recurrence in Hürthle cell carcinoma of the thyroid gland. Thyroid. 2012 Jul;22(7):690-4.

4. Cimino-Mathews A, Sharma R, Illei PB. Detection of human papillomavirus in small cell carcinomas of the anus and rectum. Am J Surg Pathol.2012 Jul;36(7):1087-92.
Key words: small cell carcinoma, HPV, p16, anal carcinoma

5. Gocke CD, Mason J, Brusca L, Laosinchai-Wolf W, Higgs C, Newell H, Masters A, Friar L, Karp J, Griffiths M, Wei Q, Labourier E. Risk-based classification of leukemia by cytogenetic and multiplex molecular methods: results from a multicenter validation study. Blood Cancer J. 2012 July;2:e78-e86.

6. Hung C-F, Chiang AJ, Tsai H-H, Pomper MG, Kang TH, Roden RR, Wu T-C. Ovarian cancer gene therapy using HPV-16 pseudovirion carrying the HSV-tk gene. PLoS ONE. 2012 July;7(7):e40983.
Key words: ovarian cancer, gene therapy, HPV, pseudovirion, MOSEC

7. Kwiatkowski NP, Babiker WM, Merz WG, Carroll KC, Zhang SX. Evaluation of nucleic acid sequencing of the D1/D2 region of the large-subunit of the 28S rDNA and the Internal Transcribed Spacer region using SmartGeneTM IDN software for identification of filamentous fungi in a Clinical Laboratory. J Mol Diagn. 2012 Jul;14(4):393-401.
Key words: filamentous fungi, sequencing identification, ITS, D1/D2, SmartGene software

8. Liu CY, Liu YC, Venkatesh BA, Lima JA, Bluemke DA, Steenbergen C. Heterogeneous distribution of myocardial steatosis-An ex vivo evaluation. Magn Reson Med. 2012 Jul;68(1):1-7.

9. Lovejoy CA, Li W, Reisenweber S, Thongthip S, Bruno J, de Lange T, De S, Petrini JH, Sung PA, Jasin M, Rosenbluh J, Zwang Y, Weir BA, Hatton C, Ivanova E, Macconaill L, Hanna M, Hahn WC, Lue NF, Reddel RR, Jiao Y, Kinzler K, Vogelstein B, Papadopoulos N, Meeker AK; for the ALT Starr Cancer Consortium.
Loss of ATRX, genome instability, and an altered DNA damage response are hallmarks of the alternative lengthening of telomeres pathway. PLoS Genet. 2012 Jul;8(7):e1002772.

10. Parson SJ, Russell SD, Bennett MK, Dunn JM, Gilotra NA, Rao S, Harrington C, Freitag TB, Foster MC, Halushka MK. Increased lipofuscin on endomyocardial biopsy predicts greater cardiac improvement in adolescents and young adults. Cardiovasc Pathol. 2012 Jul;21(4):317-23.

11. Pramanik D, Campbell NR, Das S, Gupta S, Chenna V, Bisht S, Sysa-Shah P, Bedja D, Karikari C, Steenbergen C, Gabrielson KL, Maitra A, Maitra A. A composite polymer nanoparticle overcomes multidrug resistance and ameliorates doxorubicin-associated cardiomyopathy. Oncotarget. 2012 Jul;3(6):640-50.

12. Riedel S. Procalcitonin and the role of biomarkers in the diagnosis and management of sepsis. Diagn Microbiol Infect Dis 2012 Jul;73(3):221-7.

13. Singhi AD, Lazenby AJ, Montgomery EA. Gastric adenocarcinoma with chief cell differentiation: a proposal for reclassification as oxyntic gland polyp/adenoma. Am J Surg Pathol. 2012 Jul;36(7):1030-5.

14. Tobian AAR, Kigozi G, Gravitt PE, Xiao C, Serwadda D, Eaton K, Kong X, Wawer MJ, Nalugoda F, Quinn TC, Gray RH. Risk factors for human papillomavirus incidence and clearance among HIV-positive and HIV-negative men in sub-Saharan Africa. AIDS. 2012 Jul 31;26(12):1555-65.

15. Toll A, Epstein JI. Invasive low grade papillary urothelial carcinoma: a clinicopathologic analysis of 41 cases. Am J Surg Pathol. 2012 Jul;36:1081-6.
Key words: bladder carcinoma, urothelial carcinoma

1. Allen JG, Lee MT, Weiss ES, Arnaoutakis GJ, Shah AS, Detrick B. Preoperative recipient cytokine levels are associated with early lung allograft dysfunction. Ann Thorac Surg. 2012 Jun;93(6):1843-9.
Key words: cytokines, lung allograft

2. Bagnasco SM, Subramanian AK, Desai NM. Fungal infection presenting as giant cell tubulointerstitial nephritis in kidney allograft. Transpl Infect Dis. 2012 Jun;14(3):288-91.
Key words: kidney allograft, fungal infection, tubulointerstitial nephritis
PMID: 22093412

3. Bishop JA, Nelson AM, Merz WG, Askin FB, Riedel S. Evaluation of the detection of melanin by the Fontana-Masson silver stain in tissue with a wide range of organisms including Cryptococcus. Hum Pathol. 2012 Jun;43(6):898-903.
Key words: melanin, Fontana-Masson silver stain, Cryptococcus
PMID: 22154051

4. Holmes BJ, Delev NG, Pasternack GR, Halushka MK. Novel cause of sudden cardiac death: IgG4-related disease. Circulation. 2012 Jun;125(23):2956-7.
Key words: sudden cardiac death, IgG4
PMID: 22689933

5. Karafin M, Fuller A, Savage WJ, King KE, Ness PM, Tobian AAR. The impact of apheresis platelet manipulation on corrected count increment. Transfusion. 2012 June;52:1221-7.
Key words: apheresis, platelets
PMID: 22333358

6. Li QK, Gabrielson E, Zhang H. Application of glycoproteomics for the discovery of biomarkers in lung cancer. Proteomics Clin Appl. 2012 Jun;6(5-6):244-56.
Key words: glycoproteomics, lung cancer, biomarkers, mass spectrometry, tissues.

7. Pisitkun T, Gandolfo MT, Knepper M, Bagnasco SM. Application of system biology principles to protein biomarker discovery: urinary exosomal proteome in renal transplantation. Proteomics Clin Appl. 2012 June;6(5-6):268-78.
Key words: protein biomarker, exosomal proteome, renal transplantation

8. Sadegh-Nasseri S, Chou CL, Hartman IZ, Kim A, Narayan K. How HLA-DM works: recognition of MHC II conformational heterogeneity. Front Biosci (Schol Ed). 2012 Jun 1;4:1325-32.
Key words: HLA-DM, immunodominance, molecular mechanisms, antigen processing, HLA-DR

9. Tian Y, Esteva FJ, Song J, Zhang H. Altered expression of sialylated glycoproteins in breast cancer using hydrazide chemistry and mass spectrometry. Mol Cell Proteomics. 2012 Jun;11(6):M111.011403.
Key words: glycoproteins, sialylated glycoproteins, breast cancer, mass spectrometry, proteomics
PMID: 22318369

10. Van Neste L, Bigley J, Toll A, Otto G, Clark J, Delree P, Van Criekange W, Epstein JI. A tissue biopsy based epigenetic multiplex PCR assay for prostate cancer detection. BMC Urol. 2012 June;12:16.
Key words: prostate adenocarcinoma, GSTPI, methlyation
PMID: 22672250

1. Barin JG, Rose NR, Ciháková D. Macrophage diversity in cardiac inflammation: a review. Immunobiology. 2012 May;217(5):468-75.
Key words: cardiac inflammation, macrophage

2. Burns KH, Boeke JD. Human transposon tectonics. Cell. 2012 May 11;149(4):740-52.
Key words: genome, mobile DNA, structural variation, genetic diversity
PMID: 22579280

3. Codispoti K-E, Beason-Held LL, Kraut MA, O'Brien RJ, Rudow G, Pletnikova O, Crain B, Troncoso JC, Susan Resnick SM. Longitudinal brain activity changes in asymptomatic Alzheimer disease. Brain and Behavior. 2012;2(3):221-30.
Key words: Amyloid, dementia, PET, tau
no PMID available

4. Cornish TC, Swapp RE, Kaplan KJ. Whole-slide imaging: routine pathologic diagnosis. Adv Anat Pathol. 2012 May;19(3):152-9.
Key words: pathology, diagnosis, whole slide imaging

5. Guo N, Wang J, Ness P, Yao F, Bi X, Li J, Yun Z, Guo X, Huang Y, Dong X, Tiemuer MH, He W, Ma H, Huang M, Liu J, Wright DJ, Nelson K, Shan H; for the NHLBI Retrovirus Epidemiology Donor Study-II (REDS-II) International Component. First-time donors responding to a national disaster may be an untapped resource for the blood centre. Vox Sang. 2012 May;102(4):338-44.
Key words: blood donation, first time donors, national disaster, untapped recourses

6. Epstein JI, Feng Z, Trock BJ, Pierorazio PM. Upgrading and downgrading of prostate cancer from biopsy to radical prostatectomy: incidence and predictive factors using The modified Gleason grading system and factoring in tertiary grades. Eur Urol. 2012 May;61:1019-24.
Key words: Gleason grade; prostate adenocarcinoma; radical prostatectomy

7. Malinowska I, Kwiatkowski DJ, Weiss S, Martignoni G, Netto G, Argani P. Perivascular epithelioid cell tumors (PEComas) harboring TFE3 gene rearrangements lack the TSC2 alterations characteristic of conventional PEComas: further evidence for a biological distinction. Am J Surg Pathol. 2012 May;36(5):783-4.
Key words: TFE3; PEComa; Tuberous Sclerosis; translocation; TSC2

8. McCall CM, Mudali S, Arceci RJ, Small D, Fuller S, Gocke CD, Vuica-Ross M, Burns KH, Borowitz MJ, Duffield AS. Flow cytometric findings in hemophagocytic lymphohysitiocytosis. Am J Clin Pathol. 2012 May;137:786-94.
Key words: flow cytometry, hemophagocytic lymphohistiocytosis, Epstein Barr virus, hemophagocytic syndrome

9. Orr BA, Eberhart CG. Nature versus nurture in glioblastoma: microenvironment and genetics can both drive mesenchymal transcriptional signature. Am J Pathol. 2012 May;180(5):1768-71.
Key words: glioblastoma, genetics, mesenchymal transcription

10. Savonenko AV, Melnikova T, Hiatt A, Li T, Worley PF, Troncoso JC, Wong PC, Price DL. Alzheimer's therapeutics: translation of preclinical science to clinical drug development. Neuropsychopharmacol. 2012 Jun; 37(1):261-77.
Key words: Alzheimer's disease, therapeutics, drug development
PMID: 21937983

11. Singhi AD, Jain D, Kakar S, Wu TT, Yeh MM, Torbenson M. Reticulin loss in benign fatty liver: an important diagnostic pitfall when considering a diagnosis of hepatocellular carcinoma. Am J Surg Pathol. 2012 May;36(5):710-5.
Key words: reticulin, fatty liver, hepatocellular carcinoma

12. Tabbarah AZ, Carlson AW, Oviedo A, Ketterling RP, Rodriguez FJ. Identification of t(1;19)(q12;p13) and ploidy changes in an ependymosarcoma: a cytogenetic evaluation. Clin Neuropathol 2012 May-Jun;31(3):142-5.
Key words: ependymosarcoma, cytogenetics

13. Vang R, Visvanathan K, Gross A, Maambo E, Gupta M, Kuhn E, Li R, Ronnett BM, Seidman JD, Yemelyanova A, Shih IM, Shaw PA, Soslow RA, Kurman RJ. Validation of an algorithm for the diagnosis of serous tubal intraepithelial carcinoma. Int J Gynecol Pathol. 2012 May;31:243-53.
Key words: Fallopian tube, STIC, serous tubal intraepithelial carcinoma, reproducibility

14. Zeng P, Wang J, Huang Y, Guo X, Li J, Wen G, Yang T, Yun Z, He M, Liu Y, Yuan Y, Schulmann J, Glynn S, Ness P, Jackson JB, Shan H; for the Retrovirus Epidemiology Donor Study-II (REDS-II), International Component. The human immunodeficiency virus-1 genotype diversity and drug resistance mutations profile of volunteer blood donors from Chinese blood centers. Transfusion. 2012 May;52(5):1041-9.
Key words: HIV, genotype diversity, drug resistance, Chinese blood donors

1. Brimo F, Epstein JI. Selected common diagnostic problems in urological pathology: Perspectives from a large genitourinary consult service. Arch Pathol Lab Med. 2012 Apr;136:360-71.
Key words: bladder carcinoma, renal cell carcinoma, prostate carcinoma

2. Brosnan JA, Iacobuzio-Donahue CA. A new branch on the tree: next-generation sequencing in the study of cancer evolution. Semin Cell Dev Biol. 2012 Apr;23(2):237-42.
Key words: cancer, gene sequence
PMID: 22245832

3. Canto MI, Hruban RH, Fishman EK, Kamel IR, Schulick R, Zhang Z, Topazian M, Takahashi N, Fletcher J, Petersen G, Klein AP, Axilbund J, Griffin C, Syngal S, Saltzman JR, Mortele KJ, Lee J, Tamm E, Vikram R, Bhosale P, Margolis D, Farrell J, Goggins M. Frequent detection of pancreatic lesions in asymptomatic high-risk individuals. Gastroenterology. 2012 Apr;142(4):796-804.
Key words: pancreatic lesions, detection
PMID: 22245846

4. Chaux A, Fajardo DA, Gonzalez-Roibon N, Partin AW, Eisenberger M, Deweese TL, Netto GJ. High-grade prostatic adenocarcinoma present in a single biopsy core as associated with increased extraprostatic extension, seminal vesicle invasion, and positive surgical margins at prostatectomy. Urology. 2012 Apr;79(4):863-8.
Key words: seminal vesicle, prostatectomy, prostate adenocarcinoma, biopsy
PMID: 22173174

5. El-Naggar AK, Westra WH. P16 expression as a surrogate marker for HPV-related oropharyngeal carcinoma: a guide for interpretive relevance and consistency. Head Neck. 2012 Apr;34(4):459-61.
Key words: HPV, head and neck cancer, oropharyngeal carcinoma

6. Epstein JI, Leclercq NR. Diagnostic issues of prostate biopsies: PIN-like ductal adenocarcinoma. Ann Pathol. 2012 Apr;32:132-6.
Key words: prostatic intraepithelial neoplasia, ductal adenocarcinoma

7. Kanda M, Matthaei H, Wu J, Hong SM, Yu J, Borges M, Hruban RH, Maitra A, Kinzler K, Vogelstein B, Goggins M. Presence of somatic mutations in most early-stage pancreatic intraepithelial neoplasia.
Gastroenterology.2012 Apr;142(4):730-3.e9
Key words: somatic mutation, neoplasia, pancreas

8. KangTH, Mao C-P, He L, Tsai YC, Liu K, La V, Wu T-C, Hung C-F. Tumor-targeted delivery of IL-2 by NKG2D leads to accumulation of antigen-specific CD8+ T cells in the tumor loci and enhanced anti-tumor effects. PLoS ONE 2012 Apr;7(4):e35141.
Key words: CD8+, tumor loci, NKG2D
PMID: 22509395

9. Netto GJ, Cheng L. Emerging critical role of molecular testing in diagnostic genitourinary pathology. Arch Pathol Lab Med 2012 Apr;136(4):372-90.
Key words: molecular testing, pathology, genitourinary

10. Seah C, Richardson SE, Tsui G, Yu B, Thornback J, McTaggart L, Boggild A, Wengenack NL, Zhang SX. Comparison of the FXGTM: RESP (Asp +) real-time PCR assay with direct immunofluorescence and calcofluor white staining for the detection of Pneumocystis jirovecii in respiratory specimens. Medical Mycology. 2012 Apr;50(3):324-327.
Key words: Pneumocystis jirovecii, Pneumocystis pneumonia, direct fluorescence antibody, calcofluor white stain, PCR
PMID: 21859386

11. Ross H, Martignoni G, Argani P. Renal cell carcinoma with clear cell and papillary features. Arch Pathol Lab Med. 2012 Apr;136(4):391-9.
Key words: Renal, carcinoma, TFE3, translocation, papillary

1. Brimo F, Epstein JI. Immunohistochemical pitfalls in prostate pathology. Hum Pathol. 2012Mar;43:313-24.
Key words: prostate adenocarcinoma, immunohistochemistry, high molecular weight cytokeratin, p63, AMACR
PMID: 22325142

2. Bishop JA, Teruya-Feldstein J, Westra WH, Pelosi G, Travis WD, Rekhtman N. p40 (?Np63) is superior to p63 for the diagnosis of pulmonary squamous cell carcinoma. Mod Pathol. 2012 Mar;25(3):405-15.
PMID: 22056955

3. Chen G, Olson MT, O'Neill AO, Norris A, Beierl K, Harada S, Debeljak M, Rivera-Roman K, Finley S, Stafford A, Gocke CD, Lin MT, Eshleman JR. A virtual pyrogram generator to resolve complex pyrosequencing results. J Mol Diagn. 2012 Mar;14:149-59.
PMID: 22316529

4. Duffield AS, Aoki J, Levis M, Cowan K, Gocke CD, Burns KH, Borowitz MJ, Vuica-Ross M. Clinical and pathologic features of secondary acute promyelocytic leukemia. Am J Clin Pathol. 2012 Mar;137(3):395-402.
Key words: Acute promyelocytic leukemia, therapy-related acute myeloid leukemia, therapy-related myeloid neoplasm, acute myeloid leukemia with myelodysplasia-related changes,flow cytometry
PMID: 22338051

5. Guo N, Wang J, Ness P, Yao F, Dong X, Bi X, Mei H, Li J, He W, Lu Y, Ma H, Wen X, Huang M, Liu J, Wright DJ, Shan H; NHLBI Retrovirus Epidemiology Donor Study-II (REDS-II), International Component. Demographics of apheresis platelet donors in five blood centers in China. Transfusion. 2012 Mar:52(3):560-6.
Key words: blood safety, blood availability, donor recruitment, international collaboration

6. Mahmud A, Lee R, Munfus-McGray D, Kwiatkowski N, Subramanian A, Neofytos D, Carroll K, Zhang SX. Actinomucor elegans as an emerging cause of mucormycosis: case report and review. J Clin Microbiol. 2012 March;50(3):1092-5.
Key words: Mucormycosis, actinomucor elegans, refractory aplastic anemia, emerging fungal pathogen
PMID: 22205785

7. Rodriguez FJ. Peripheral nerve sheath tumors: the elegant chapter in surgical neuropathology. Acta Neuropathol. 2012 Mar;123(3):293-4.
Key words: peripheral nerve, sheath tumor, neuropathology

8. Rodriguez FJ, Folpe AL, Giannini C, Perry A. Pathology of peripheral nerve sheath tumors: diagnostic overview and update on selected diagnostic problems. Acta Neuropathol. 2012 Mar;123(3):295-319.
Key words: peripheral nerve, sheath tumor, diagnosis
PMID: 22327363

9. Rodriguez FJ, Stratakis CA, Evans DG. Genetic predisposition to peripheral nerve neoplasia: diagnostic criteria and pathogenesis of neurofibromatoses, Carney complex, and related syndromes. Acta Neuropathol. 2012 Mar;123(3):349-67.
Key words: nerve neoplasia, neurofibromatosis, Carney complex

10. Sheu JJ, Guan B, Tsai FJ, Hsiao EY, Chen CM, Seruca R, Wang TL, Shih IeM. Mutant BRAF induces DNA strand breaks, activates DNA damage response pathway, and up-regulates glucose transporter-1 in nontransformed epithelial cells. Am J Pathol. 2012 Mar;180(3):1179-88
Key words: DNA damage, BRAF, mutation

PMID: 22207015

11. Singhi AD, Cimino-Mathews A, Jenkins RB, Lan F, Fink SR, Nassar H, Vang R, Fetting JH, Hicks J, Sukumar S, De Marzo AM, Argani P. MYC gene amplification is often acquired in lethal distant breast cancer metastases of unamplified primary tumors. Mod Pathol. 2012 Mar;25(3):378-87.
Key words: breast, cancer, metastasis

12. Vang R, Gupta G, Wu LS, Yemelyanova AV, Kurman RJ, Murphy KM, DeScipio C, Ronnett BM. Diagnostic reproducibility of hydatidiform moles: ancillary techniques (p57 immunohistochemistry and molecular genotyping) improve morphologic diagnosis. Am J Surg Pathol. 2012 Mar;36:443-53.
Key words: Hydatidiform mole, p57, reproducibility

PMID: 22245958

13. Xu Y, Chenna V, Hu C, Sun HX, Khan M, Bai H, Yang XR, Zhu QF, Sun YF, Maitra A, Fan J, Anders RA. Polymeric nanoparticle-encapsulated hedgehog pathway inhibitor HPI-1 (nanoHHI) inhibits systemic metastases in an orthotopic model of human hepatocellular carcinoma. Clin Cancer Res. 2012 Mar 1;18(5):1291-302.
Key words: polymeric nanoparticle-encapsulated hedgehog pathway, systemic metastates, hepatocellular carcinoma

14. Yang SJ, Zhang H. Analysis by reversible reaction to hydrazide beads and mass spectrometry. Anal Chem. 2012 Mar;84(5):2232-8.
Key words: mass spectrometry, hydrazide beads

1. Albadine R, Hyndman ME, Chaux A, Jeong JY, Saab S, Tavora F, Epstein JI, Gonzalgo ML, Pavlovich CP, Netto GJ. Characteristics of positive surgical margins in robotic-assisted radical prostatectomy, open retropubic radical prostatectomy, and laparoscopic radical prostatectomy: a comparative histopathologic study from a single academic center. Hum Pathol. 2012 Feb;43(2):254-60.
Key words: surgical margins, prostatectomy, histopathology

2. Asnaghi L, Ebrahimi KB, Schreck KC, Bar EE, Coonfield ML, Bell WR, Handa J, Merbs SL, Harbour JW, Eberhart CG. Notch signaling promotes growth and invasion in uveal melanoma. Clinical Cancer Research. 2012 Feb;18(3):654-65.
Key words: Uveal melanoma, notch, cellular invasion, proliferation, gamma-secretase

3. Bishop JA, Maleki Z, Valsamakis A, Ogawa T, Chang X, Pai SI, Westra WH. Application of the Hybrid Capture 2 assay to squamous cell carcinomas of the head and neck: A convenient liquid-phase approach for the reliable determination of human papillomavirus status. Cancer Cytopathol. 2012 Feb 25;120(1):18-25.
Key words: squamous cell carcinoma, human papillomavirus

4. Hong SM, Omura N, Vincent A, Li A, Knight S, Yu J, Hruban RH, Goggins M. Genome-wide CpG island profiling of intraductal papillary mucinous neoplasms of the pancreas. Clin Cancer Res. 2012 Feb;18(3):700-12.
Key words: Pancreatic cancer, DNA methylation, IPMN

5. Jones S, Wang TL, Kurman RJ, Nakayama K, Velculescu VE, Vogelstein B, Kinzler KW, Papadopoulos N, Shih IeM. Low-grade serous carcinomas of the ovary contain very few point mutations. J Pathol. 2012 Feb;226(3):413-20.
Key words: ovarian cancer, exome sequencing

6. Kshirsagar M, Jiang W, Shih IeM. DNA damage response is prominent in ovarian hgh-grade serous carcinomas, especially those with Rsf-1 (HBXAP) overexpression. J Oncol. 2012;2012:621685. (on-line journal)
Key words: ovarian cancer, DNA damage, Rsf-1
PMID: 22028712

7. Kuhn E, Kurman RJ, Vang R, Sehdev AS, Han G, Soslow R, Wang TL, Shih IeM. TP53 mutations in serous tubal intraepithelial carcinoma and concurrent pelvic high-grade serous carcinoma--evidence supporting the clonal relationship of the two lesions. J Pathol. 2012 Feb;226(3):421-6.
Key words: ovarian cancer, TP53, mutation

8. Matthaei H, Norris-Kirby A, Tsiatis AC, Olino K, Hong SM, dal Molin M, Goggins M, Canto M, Horton KM, Jackson KD, Capelli P, Zamboni G, Bortesi L, Furukawa T, Egawa S, Ishida M, Ottomo S, Unno M, Motoi F, Wolfgang CL, Edil BH, Cameron JL, Eshleman JR, Schulick RD, Maitra A, Hruban RH. Clinicopathological characteristics and molecular analyses of multifocal intraductal papillary mucinous neoplasms of the pancreas. Ann Surg. 2012 Feb;255(2):326-33.
Key words: pancreas, pancreatic cancer, intraductal papillary mucinous neoplasm

9. Sfanos KS, Aloia AL, De Marzo AM, Rein A. XMRV and prostate cancer-a 'final' perspective. Nat Rev Urol. 2012 Feb;9:111-8.
Key words: XMRV, prostate cancer, murine leukemia virus
PMID: 22231291

10. Singhi AD, Califano J, Westra WH. High-risk human papillomavirus in nasopharyngeal carcinoma. Head Neck. 2012 Feb;34(2):213-8.
Key words: human papillomavirus, nasopharyngeal carcinoma

11. Tobian AAR, Kigozi G, Redd AD, Serwadda D, Kong X, Oliver AE, Nalugoda F, Quinn TC, Gray RH, Wawer MJ. Male circumcision and herpes simplex virus type 2 infection in female partners: a randomized trial in Rakai, Uganda. J Infect Dis. 2012 Feb;205:486-90.
Key words: circumcision, herpes simplex virus type 2, Uganda

12. Yachida S, Vakiani E, White CM, Zhong Y, Saunders T, Morgan R, de Wilde RF, Maitra A, Hicks J, Demarzo AM, Shi C, Sharma R, Laheru D, Edil BH, Wolfgang CL, Schulick RD, Hruban RH, Tang LH, Klimstra DS, Iacobuzio-Donahue CA. Small cell and large cell neuroendocrine carcinomas of the pancreas are genetically similar and distinct from well-differentiated pancreatic neuroendocrine tumors. Am J Surg Pathol. 2012 Feb;36(2):173-84.
PMID: 22251937

13. Yang W, McCrae MA. The molecular biology of rotaviruses X: intercellular dissemination of rotavirus NSP4 requires glycosylation and is mediated by direct cell-cell contact through cytoplasmic extrusions. Arch Virol. 2012 Feb;157(2):305-14.
Key words: rotavirus, glycosylation, cytoplasm

14. Yu J, Li A, Hong SM, Hruban RH, Goggins M. MicroRNA alterations of pancreatic intraepithelial neoplasias. Clin Cancer Res. 2012 Feb;18(4):981-92.
Key words: Pancreatic cancer, microRNA, PanIN

15. Zheng G, Schmieg J, Guan H, Ali SZ. Blastic plasmacytoid dendritic cell neoplasm: cytopathologic findings. Acta Cytol. 2012 Feb;56:204-8.
Key words: Cerebrospinal fluid, blastic plasmacytoid dendritic cell neoplasm, cytopathology, flow cytometry
PMID: 2237808

1. Al Hussain T, Nagar MS, Epstein JI. Gleason pattern 5 is frequently underdiagnosed on prostate needle core biopsy. Urology. 2012 Jan;79:178-81.
Key words: Gleason grade, prostate carcinoma, needle biopsy

2. Berman DM, Bosenberg MW, Orwant RL, Thurberg BL, Draetta GF, Fletcher CD, Loda M. Investigative pathology: leading the post-genomic revolution. Lab Invest. 2012 Jan;92(1):4-8.
Key words: pathology, post-genome

3. Bishop JA, Ogawa T, Chang X, Illei PB, Gabrielson E, Pai SI, Westra WH. HPV analysis in distinguishing second primary tumors from lung metastases in patients with head and neck squamous cell carcinoma. Am J Surg Pathol. 2012 Jan;36(1):142-8.
Key words: HPV, lung metastasis, squamous cell carcinoma

4. Burton EC, Mossa-Basha M. To image or to autopsy? Ann Intern Med. 2012 Jan17;156(2)158-9.
Key words: postmortem examination, autopsy, virtopsy, virtual autopsy, autopsy imaging

5. Chaux A, Karram S, Miller JS, Fajardo DA, Lee TK, Miyamoto H, Netto GJ. High-grade papillary urothelial carcinoma of the urinary tract: a clinicopathologic analysis of a post-World Health Organization/International Society of Urological Pathology classification cohort from a single academic
center. Hum Pathol. 2012 Jan;43(1):115-20.
Key words: urothelial carcinoma, pathology

6. Chenna V, Hu C, Pramanik D, Aftab BT, Karikari C, Campbell NR, Hong SM, Zhao M, Rudek MA, Khan SR, Rudin CM, Maitra A. A polymeric nanoparticle encapsulated small-molecule inhibitor of hedgehog signaling (NanoHHI) bypasses secondary mutational resistance to smoothened antagonists. Mol Cancer Ther 2012 Jan;11(1):165-73.
Key words: nanoparticle, hedgehog signaling

7. Epstein JI. The diagnosis of limited adenocarcinoma of the prostate. Histopathol 2012 Jan;60:28-40.
Key words: adenocarcinoma; prostate carcinoma; pathology

8. Gupta S, Pramanik D, Mukherjee R, Campbell NR, Elumalai S, de Wilde RF, Hong SM, Goggins MG, De Jesus-Acosta A, Laheru D, Maitra A. Molecular determinants of retinoic acid sensitivity in pancreatic cancer. Clin Cancer Res 2012 Jan 1;18(1):280-9.
Key words: retinoic acid, pancreatic cancer

9. Le A, Lane NA, Hamaker M, Bose S, Barbi J, Tsukamoto T, Rojas CJ, Slusher BS, Zhang H, Zimmerman LJ, Liebler DC, Slebos R, Lorkiewicz P, Higashi RM, Fan WMT and Dang CV. Glucose-independent glutamine metabolism via TCA cycling for proliferation and survival in human B lymphocytes. (Co-corresponding author). Cell Metab. 2012 Jan 4;15(1):110-21.
Key words: glucose, glutamine metabolism, TCA cycling, proliferation, B lymphocytes
PMID: 22225880

10. Lin A, Rodriguez FJ, Karajannis MA, Williams SC, Legault G, Zagzag D, Burger PC, Allen JC, Eberhart CG, Bar EE. BRAF alterations in primary glial and glioneuronal neoplasms of the central nervous system with identification of 2 novel KIAA1549:BRAF fusion variants. J Neuropathol Exp Neurol 2012 Jan;71(1):66-72.
Key words: central nervous system, glial neoplasm, BRAF fusion

11. Marzinke MA, Jarrar P, Atkinson M, Humphrey RL, Detrick B, Sokoll LJ. Origin of a false positive urine pregnancy test in a patient with membranoproliferative glomerulonephritis type I. Clin Chim Acta 2012 Jan;413(1-2):361-3.
Key words: urine pregnancy test, membranoproliferative glomerulonephritis

12. Montgomery E, Voltaggio L, Canto MI. Much ado about very little (lamina propria)? Gastrointest Endosc 2012 Jan;75(1):19-22.
Key words: lamina propria

13. Netto GJ. Molecular biomarkers in urothelial carcinoma of the bladder: are we there yet? Nat Rev Urol 2012 Jan;9(1):41-51.
Key words: urothelial carcinoma, bladder
PMID: 22158597

14. Savonenko AV, Melnikova T, Hiatt A, Li T, Worley PF, Troncoso JC, Wong PC, Price DL. Alzheimer's therapeutics: translation of preclinical science to clinical drug development. Neuropsychopharmacology 2012 Jan;37(1):261-77.
Key words: Alzheimer's disease, drug development

15. Sfanos KS, De Marzo AM. Prostate cancer and inflammation: the evidence. Histopathology 2012 Jan;60(1):199-215.
Key words: prostate cancer, inflammation
PMID: 22212087

1. Amukele TK, Baird GS, Chandler WL. Reducing the use of coagulation test panels. Blood Coagul Fibrinolysis. 2011 Dec;22(8):688-95.
Key words: coagulation test panels, blood

2. Bishop JA, Sharma R, Westra WH. PAX8 immunostaining of anaplastic thyroid carcinoma: a reliable means of discerning thyroid origin for undifferentiated tumors of the head and neck. Hum Pathol. 2011 Dec;42(12):1873-7.
Key words: PAX8, immunostain, anaplastic thyroid carcinoma, tumors

3. Cimino-Mathews A, Lin BM, Chang SS, Boahene KD, Bishop JA. Carcinoma ex pleomorphic adenoma of the nasal cavity. Head Neck Pathol. 2011 Dec;5(4):405-9.
Key words: carcinoma, adenoma, nasal cavity

4. Emadi A, Le A, Harwood CJ, Stagliano KW, Kamangar F, Ross AE, Cooper CR, Dang CV, Karp JE, Vuica-Ross M. Metabolic and electrochemical mechanisms of dimeric naphthoquinones cytotoxicity in breast cancer cells. Bioorg Med Chem. 2011 Dec 1;19(23):7057-62.
Key words: breast cancer, dimeric naphtoquinones

5. Eshleman SH, Hudelson S, Redd AD, Wang L, Debes R, Chen YQ, Martens CA, Ricklefs SM, Selig EJ, Porcella SF, S Munshaw, SC Ray, Piwowar-Manning E, McCauley M, Hosseinipour MC, Kumwenda J, Hakim JG, Chariyalertsak S, de Bruyn G, Grinsztejn B, Kumarasamy N, Makhema J, Mayer KH, Pilotto J, Santos BR, Quinn TC, Cohen MS, Hughes

6. JP. Analysis of genetic linkage of HIV from couples enrolled in the HIV Prevention Trials Network 052 trial. J Infect Dis. 2011 Dec; 204:1918-26.
Key words: HIV, linkage, prevention, HPTN 052

7. Hristov AC, Vonderheid EC, Borowitz MJ. Simplified flow cytometric assessment in mycosis fungoides and Sézary syndrome. Am J Clin Pathol .2011 Dec;136(6):944-53.
Key words: flow cytometry, mycosis fungoides, Sézary syndrome

8. Kacar A, Azili MN, Cihan BS, Demir HA, Tiryaki HT, Argani P. Metanephric stromal tumor: a challenging diagnostic entity in children. J Pediatr Surg .2011 Dec;46(12):e7-e10.
Key words: metanephric, kidney, neoplasm

9 Lin MT, Tseng LH, Beierl K, Harada S, Hafez MJ, Eshleman JR, Gocke CD. Analysis of hematopoietic stem cell transplant engraftment: use of loss or gain of microsatellite alleles to identify residual hematopoietic malignancy. Diagn Mol Pathol. 2011 Dec;20(4):194-202.
Key words: hematopoietic stem cells, microsatellite alleles, malignancy

10. Onyango-Makumbi C, Omer SB, Mubiru M, Moulton LH, Nakabiito C, Musoke P, Mmiro F, Zwerski S, Wigzell H, Falksveden L, Wahren B, Antelman G, Fowler MG, Guay L, Jackson JB. Safety and efficacy of HIV hyperimmune globulin for prevention of mother-to-child HIV transmission in HIV-1-infected pregnant women and their infants in Kampala, Uganda (HIVIGLOB/NVP STUDY). J Acquir Immune Defic Syndr. 2011 Dec 1;58(4):399-407.
Key words: HIV, hyperimmune globulin, pregnancy, Uganda

11. Savard P, Gopinath R, Zhu W, Kitchel B, Rasheed JK, Tekle T, Roberts A, Ross T, Razeq J, Landrum BM, Wilson LE, Limbago B, Perl TM, Carroll KC. First NDM-positive Salmonella sp. strain identified in the United States. Antimicrob Agents Chemother. 2011 Dec;55(12):5957-8.
Key words: Salmonella, carbapenamase, resistance, NDM, infection control.

12. Sokoll LJ, Rosenwald S, Lyons J, Elliott DJ, Chan DW. Is the WHO 90:10 prostate specific antigen (PSA) first international standard really 90% ?1-anticymotrypsin-bound PSA and 10% free PSA? Clin Chem. 2011 Dec;57(12):1776-7.
Key words: PSA, standardization
PMID: 21986893

13. Tian Y, Roden R, Zhang H. Glycoproteins associated with different histological subtypes of ovarian tumors. Proteomics. 2011 Dec;11(24):4677-87.
Key words: glycoproteins, ovarian cancer, mass spectrometry, tumor subtypes, proteomics
PMID: 22113853

14. Tobian AAR, Kong X, Gravitt PE, Eaton K, Kigozi G, Serwadda D, Oliver AE, Nalugoda F, Makumbi F, Chen MZ, Wawer MJ, Quinn TC, Gray RH. Male circumcision and anatomic sites of penile high-risk human papillomavirus in Rakai, Uganda. Int J Cancer. 2011 Dec 15; 129(12):2970-5.
Key words: circumcision, human papillomavirus, Uganda

15. Vonderheid EC, Kadin ME, Gocke CD. Lymphomatoid papulosis followed by pityriasis lichenoides: a common pathogenesis? Am J Dermatopathol. 2011 Dec;33(8):835-40.
Key words: lymphoma, pityriasis lichenoides

16. Wahba L, Amon JD, Koshland D, Vuica-Ross M. RNase H and multiple RNA biogenesis factors cooperate to prevent RNA:DNA hybrids from generating genome instability. Mol Cell. 2011 Dec 23;44(6):978-88.
Key words: genome instability, RNASE H, RNA biogenesis, RNA:DNA hybryds

1. Bishop JA, Westra WH. Human papillomavirus-related small cell carcinoma of the oropharynx. Am J Surg Pathol. 2011 Nov;35(11):1679-84.
Key words: head and neck cancer, HPV, small cell carcinoma

2. Brimo F, Herawi M, Sharma R, Netto GJ, Epstein JI, Illei PB. Hepatocyte nuclear factor-1? expression in clear cell adenocarcinomas of the bladder and urethra: diagnostic utility and implications for histogenesis. Hum Pathol. 2011 Nov;42(11):1613-9.
Key words: Clear cell adenocarcinoma, bladder, urethra, hepatocyte nuclear factor-1?

3. Cousins MM, Laeyendecker O, Beauchamp G, Brookmeyer R, Towler W, Hudelson S, Khaki L, Koblin B, Chesney M, Moore RD, Kelen GD, Coates T, Quinn TC, Donnell D, Eshleman SH. Use of a high resolution melting (HRM) assay to compare gag, pol, and env diversity in adults with different stages of HIV infection. PLoS One. 2011;6(11):e27211.
Key words: HIV, diversity, high resolution melting, incidence

4. Dalai SK, Khoruzhenko S, Drake CG, Jie CC, Sadegh-Nasseri S. Resolution of infection promotes a state of dormancy and long survival of CD4 memory T cells. Immuno and Cell Biol. 2011 Nov;89:870-81.
Key words: Memory CD4 T cells, long-term memory survival, pro survival gene upregulation, anti activation gene activation

5. Fajardo DA, Miyamoto H, Miller JS, Lee TK, Epstein JI. Identification of Gleason pattern 5 on prostatic needle core biopsy: frequency of underdiagnosis and relation to morphology. Am J Surg Pathol. 2011 Nov;35(11):1706-11.
Key words: Gleason grading, prostate adenocarcinoma, prostate needle biopsy

6. Guan B, Wang TL, Shih IeM. ARID1A, a factor that promotes formation of SWI/SNF-mediated chromatin remodeling, is a tumor suppressor in gynecologic cancers. Cancer Res 2011 Nov;71(21):6718-27.
Key words: ovarian cancer, gynecologic cancer, ARID1A, mutation

7. Karafin M, Jallo GI, Ayars M, Eberhart CG, Rodriguez FJ. Rosette forming glioneuronal tumor in association with Noonan syndrome: pathobiological implications. Clin Neuropathol 2011 Nov-Dec;30(6):297-300.

8. Kurman RJ, Vang R, Junge J, Hannibal CG, Kjaer SK, Shih IeM. Papillary tubal hyperplasia: the putative precursor of ovarian atypical proliferative (borderline) serous tumors, noninvasive implants, and endosalpingiosis. Am J Surg Pathol 2011 Nov;35(11):1605-14.
Key words: ovarian cancer, serous tumors, fallopian tube

9. Lam-Himlin D, Tsiatis AC, Montgomery E, Pai RK, Brown JA, Razavi M, Lamps L, Eshleman JR, Bhagavan B, Anders RA. Sarcina organisms in the gastrointestinal tract: a clinicopathologic and molecular study. Am J Surg Pathol. 2011 Nov;35(11):1700-5.

10. Lee TK, Chaux A, Karram S, Miyamoto H, Miller JS, Fajardo DA, Epstein JI, Netto GJ. Papillary urothelial neoplasm of low malignant potential of the urinary bladder: clinicopathologic and outcome analysis from a single academic center. Hum Pathol 2011 Nov;42(11):1799-803.

11. Li T, Li Y-M, Ahn K, Price DL, Sisodia SS, Wong P. Increased expression of PS1 is sufficient to elevate the level and activity of ?-secretase in vivo. PLoS ONE 2011 Nov;6(11):e28179

12. McCall MN, Kent OA, Yu J, Fox-Talbot K, Zaiman AL, Halushka MK. MicroRNA profiling of diverse endothelial cell types. BMC Med Genomics 2011 Nov 2;4(1):78.

13. Toubaji A, Albadine R, Meeker AK, Isaacs WB, Lotan T, Haffner MC, Chaux A, Epstein JI, Han M, Walsh PC, Partin AW, De Marzo AM, Platz EA, Netto GJ. Increased gene copy number of ERG on chromosome 21 but not TMPRSS2-ERG fusion predicts outcome in prostatic adenocarcinomas. Mod Pathol. 2011 Nov;24(11):1511-20.

1. Amin A, Partin AW, Epstein JI. Gleason score 7 prostate cancer on needle biopsy: relation of primary pattern 3 or 4 to pathological stage and progression after radical prostatectomy. J Urol. 2011 Oct; 186:1286-90.
Key words: prostate adenocarcinoma ; needle biopsy; gleason grade; gleason score

2. DeScipio C, Haley L, Beierl K, Pandit AP, Murphy KM, Ronnett BM. Diandric triploid hydatidiform mole with loss of maternal chromosome 11. Am J Surg Pathol. 2011 Oct;35(10):1586-91.
Key words: hydatidiform mole, maternal chromosome 11

3. Grab DJ, Chakravorty SJ, van der Heyde H, Stins MF. How can microbial interactions with the blood-brain barrier modulate astroglial and neuronal function? Cell Microbiol. 2011 Oct;13(10):1470-8.
Key words: blood-brain barrier, astroglial function, neuronal function, microbes

4. Heaphy CM, Subhawong AP, Hong SM, Goggins MG, Montgomery EA, Gabrielson E, Netto GJ, Epstein JI, Lotan TL, Westra WH, Shih IeM, Iacobuzio-Donahue CA, Maitra A, Li QK, Eberhart CG, Taube JM, Rakheja D, Kurman RJ, Wu TC, Roden RB, Argani P, De Marzo AM, Terracciano L, Torbenson M, Meeker AK. Prevalence of the alternative lengthening of telomeres telomere maintenance mechanism in human cancer subtypes. Am J Pathol. 2011 Oct;179(4):1608-15.
Key words: Alternative lenghening of telomeres (ALT), telomere, cancer
PMID: 21888887

5. Lotan TL, Gurel B, Sutcliffe S, Esopi D, Liu W, Xu J, Hicks JL, Park BH, Humphreys E, Partin AW, Han M, Netto GJ, Isaacs WB, De Marzo AM. PTEN protein loss by immunostaining: analytic validation and prognostic indicator for a high risk surgical cohort of prostate cancer patients. Clin Cancer Res. 2011 Oct 15;17(20):6563-73.
Key words: prostate cancer, PTEN, immunohistochemistry, FISH

6. Maleszewski JJ, Kucirka LM, Segev DL, Halushka MK. Survey of current practice related to grading of rejection in cardiac transplant recipients in North America. Cardiovasc Pathol. 2011 Sep-Oct;20(5):261-5.
Key words: rejection, cardiac transplant

7. Martignoni G, Gobbo S, Camparo P, Brunelli M, Munari E, Segala D, Pea M, Bonetti F, Illei PB, Netto GJ, Ladanyi M, Chilosi M, Argani P. Differential expression of cathepsin K in neoplasms harboring TFE3 gene fusions. Mod Pathol. 2011 Oct;24(10):1313-9.
Key words: TFE3, cathepsin K, translocation, renal carcinoma, sarcoma

8. Rose NR. Critical cytokine pathways to cardiac inflammation. J Interferon Cytokine Res. 2011 Oct;31(10):705-10.
Key words: cytokine, cardiac inflammation

9. Schultz L, Chaux A, Albadine R, Hicks J, Kim JJ, De Marzo AM, Allaf ME,Carducci MA, Rodriguez R, Hammers HJ, Argani P, Reuter VE, Netto GJ. Immunoexpression status and prognostic value of mTOR and hypoxia-induced pathway members in primary and metastatic clear cell renal cell carcinomas. Am J Surg Pathol. 2011 Oct;35(10):1549-56.
Key words: immunoexpression, mTOR, hypoxia, renal cell carcinoma

10. Singhi AD, Hruban RH, Fabre M, Imura J, Schulick R, Wolfgang C, Ali SZ. Peripancreatic paraganglioma: a potential diagnostic challenge in cytopathology and surgical pathology. Am J Surg Pathol. 2011 Oct;35(10):1498-504.
Key words: peripancreatic paraganglioma, cytopathology, surgical pathology, diagnosis

11. Tobian AA, Gray RH. The medical benefits of male circumcision. JAMA. 2011;306:1479-80.
Key words: male circumcision

1. Bisht S, Khan MA, Bekhit M, Bai H, Cornish T, Mizuma M, Rudek MA, Zhao M, Maitra A, Ray B, Lahiri D, Maitra A, Anders RA. A polymeric nanoparticle formulation of curcumin (NanoCurc™) ameliorates CCl(4)-induced hepatic injury and fibrosis through reduction of pro-inflammatory cytokines and stellate cell activation. Lab Invest. 2011 Sep;91(9):1383-95.

2. Cox R, Epstein JI. Large nested variant of urothelial carcinoma: 23 cases of a newly described entity mimicking von brunn nests and inverted growth pattern of noninvasive papillary urothelial carcinoma. Am J Surg Pathol. 2011. Sept;35:1337-42.
Key words: bladder cancer, urothelial carcinoma, nested variant

3. Harada S, Henderson LB, Eshleman JR, Gocke CD, Burger P, Griffin CA, Batista DA. Genomic changes in gliomas detected using single nucleotide polymorphism array in formalin-fixed, paraffin-embedded tissue superior results compared with microsatellite analysis. J Mol Diagn. 2011 Sep;13(5):541-8.
Key words: gliomas, SNP array, FFPE, oligodendroglioma, genomic changes

4. Hutfless S, Matos P, Talor MV, Caturegli P, Rose NR. Significance of prediagnositic thyroid antibodies in women with autoimmune thyroid disease. J Clin Endocrinol Metab. 2011 Sep;96(9):E1466-71.
Key words: thyroiditis, Graves' disease, autoantibodies, prediction, diagnosis

5. Karafin M, Parwani AV, Netto GJ, Illei PB, Epstein JI, Ladanyi M, Argani P. Diffuse expression of PAX2 and PAX8 in the cystic epithelium of mixed epithelial stromal tumor, angiomyolipoma with epithelial cysts, and primary renal synovial sarcoma: evidence supporting renal tubular differentiation. Am J Surg Pathol. 2011 Sep;35(9):1264-73.
Key words: Kidney, cyst, synovial sarcoma, angiomyolipoma, MEST

6. Karram S, Trock BJ, Netto GJ, Epstein JI. Should intervening benign tissue be included in the measurement of discontinuous foci of cancer on prostate needle biopsy: correlation with radical prostatectomy findings. Am J Surg Pathol. 2011 Sept;35:1351-5.
Key words: prostate needle biopsy, adenocarcinoma of the prostate, radical prostatectomy

7. Lam-Himlin D, Arnold CA, Montgomery EA. Histopathology of Iatrogenic injury in the colorectum. Diagnostic Histopathology. 2011 Sept;17(9):404-8.

8. Lee MT, Caturegli P, Humphrey RL, Thompson RE, Detrick B. Gamma/ IgG ratio: role in distinguishing monoclonal spikes from fibrinogen. J Clin Lab Anal. Sept 2011;25(5):332-6.
Key words: Monoclonal gammopathy, serum protein electrophoresis, monoclonal spike, fibrinogen
PMID: 21919067

9. Matsubayashi H, Hasuike N, Onozawa Y, Knemoto H, Ono H, Hruban RH. Autoimmune pancreatitis with response to chemoradiation therapy. J Gastrointestin Liver Dis. 2011 Sept;3:315-9.
Key words: pancreatitis, autoimmune pancreatitis, IgG4

10. Ning G, Bi Y, Wang T, Xu M, Xu Y, Huang Y, Li M, Li X, Wang W, Chen Y, Wu Y, Hou J, Song A, Liu Y, Lai S. Relationship of urinary bisphenol. A concentration to risk for prevalent type 2 diabetes in Chinese adults: a cross-sectional analysis. Ann Intern Med. 2011 Sep 20;155(6):368-74.
Key words: Bisphenol A, type 2 diabetes, cross-sectional analysis
PMID: 21930854

11. Reller ME, Bodinayake C, Nagahawatte A, Devasiri V, Kodikara-Arachichi W, Strouse JJ, Flom JE, Dumler JS, Woods CW. Leptospirosis as frequent cause of acute febrile illness in southern Sri Lanka. Emerg Infect Dis. 2011 Sep;17(9):1678-84.
Key words: leptospirosis, serologic tests, Sri Lanka, fever
PMID: 21888794

12. Reller ME, Clemens EG, Schachterle SE, Mtove GA, Sullivan DJ, Dumler JS. Multiplex 5' nuclease-quantitative PCR for diagnosis of relapsing fever in a large Tanzanian cohort. J Clin Microbiol. 2011 Sep;49(9):3245-9.
Key words: Relapsing fever
PMID: 21775542

13. Ryu JK, Matthaei H, Dal Molin M, Hong SM, Canto MI, Schulick RD, Wolfgang C, Goggins MG, Hruban RH, Cope L, Maitra A. Elevated microRNA miR-21 levels in pancreatic cyst fluid are predictive of mucinous precursor lesions of ductal adenocarcinoma. Pancreatology. 2011 Sept;11(3):343-50.
PMID: 21757972

14. Tian Y, Bova GS, Zhang H. Quantitative glycoproteomic analysis of optimal cutting temperature-embedded frozen tissues identifying glycoproteins associated with aggressive prostate cancer. Anal Chem. 2011 Sept;83(18):7013-9.
Key words: prostate cancer, glycoproteins, glycosylation, aggressive cancer, OCT tissues
PMID: 21780747

15. Zheng R, Bailey E, Nguyen B, Yang X, Piloto O, Levis M, Small D. Further activation of FLT3 mutants by FLT3 ligand. Oncogene. 2011 Sep 22;30(38):4004-14.
Key words: FLT3, mutants, ligand
PMID: 21516120

1. Al Hussain TO, Epstein JI. Initial high grade prostatic intraepithelial neoplasia (HGPIN) with carcinoma on subsequent prostate needle biobsy: findings at radical prostatectomy. Am J Surg Pathol. 2011 Aug;35:1165-7.
Key words: prostatic intraepithelial neoplasia, radical prostatectomy, prostate cancer

2. Carroll KC. Tests for the diagnosis of Clostridium difficile infection: the next generation. Anaerobe. 2011 Aug;17:170-4.
Key words: Clostridium difficile, toxin B, diarrhea, pseudomembranous colitis, polymerase chain reaction

3. Cimino-Mathews A, Illei PB, Ali SZ. Atypical granular cell tumor of the thyroid: cytomorphologic features on fine needle aspiration. Diagn Cytopathol. 2011 Aug;39(8):608-11.

4. Grab DJ, Nikolskaia OV, Inoue N, Thekisoe OMM, Morrison LJ, Gibson W, Dumler SJ. Using detergent to enhance detection sensitivity of African trypanosomes in human CSF and blood by Loop-Mediated Isothermal Amplification (LAMP). PLoS Neglected Tropical Diseases. 2011 Aug;5(8):e1249.
Key words: LAMP, human African trypanosomes, human, CSF, blood, diagnosis

5. Kuhn E, Meeker AK, Visvanathan K, Gross AL, Wang TL, Kurman RJ, Shih IeM. Telomere length in different histologic types of ovarian carcinoma with emphasis on clear cell carcinoma. Mod Pathol. 2011 Aug;24(8):1139-45.
Key words: ovarian cancer, telomere

6. McTaggart LR, Lei E, Richardson SE, Zhang SX. Rapid identification of Cryptococcus neoformans and cryptococcus gattii by matrix-assisted laser desorption ionization-time-of-flight mass spectrometry (MALDI-TOF MS). J Clin Microbiol. 2011 Aug;49(8):3050-3.
Key words: Cryptococcus neoformans, Cryptococcus gattii, MALDI-TOF MS

7. Meriden Z, Montgomery EA. Anal duct carcinoma in a 70-year-old male with a history of prostate cancer. Diagnostic Histopathol. 2011 Aug;17:362-5.

8. Pramanik D, Campbell NR, Karikari C, Chivukula R, Kent OA, Mendell JT, Maitra A. Restitution of tumor suppressor microRNAs using a systemic nanovector inhibits pancreatic cancer growth in mice. Mol Cancer Ther. 2011 Aug;10(8):1470-80.

9. Ross AE, Emadi A, Marchionni L, Hurley PJ, Simons BW, Schaeffer EM, Vuica-Ross M. Dimeric naphthoquinones, a novel class of compounds with prostate cancer cytotoxicity. BJU Int. 2011 Aug;108(3):447-54.

10. Savage WJ, Tobian AA, Fuller AK, Wood RA, King KE, Ness PM. Allergic transfusion reactions to platelets are associated more with recipient and donor factors than with product attributes. Transfusion. 2011 Aug;51(8):1716-22.

11. Tobian AAR, Kong X, Wawer MJ, Kigozi G, Gravitt PE, Serwadda D, Eaton K, Nalugoda F, Quinn TC, Gray RH. Circumcision of HIV-infected men and human papillomavirus transmission to female partners: analyses of data from a randomised trial in Rakai, Uganda. Lancet Infectious Diseases. 2011 Aug;11(8):604-12.

12. Tobian AAR, Savage WJ, Tisch DJ, Thoman S, King KE, Ness PM. Prevention of allergic transfusion reactions to platelets and red blood cells through plasma reduction. Transfusion. 2011 Aug;51(8):1676-83.

13. Vincent JG,Taube JM. Pigmented extramammary Paget's disease of the abdomen: a potential mimicker of melanoma. Dermatol Online. J 2011;17(8):13.
No PMID available

14. Yachida S, Zhong Y, Patrascu R, Davis MB, Morsberger LA, Griffin CA, Hruban RH, Laheru D, Iacobuzio-Donahue CA. Establishment and characterization of a new cell line, A99, from a primary small cell carcinoma of the pancreas. Pancreas. 2011 Aug;40(6):905-10.

15. Zhong Y, Wang Z, Fu B, Pan F, Yachida S, Dhara M, Albesiano E, Li L, Naito Y, Vilardell F, Cummings C, Martinelli P, Li A, Yonescu R, Ma Q, Griffin CA, Real FX, Iacobuzio-Donahue CA. GATA6 activates Wnt signaling in pancreatic cancer by negatively regulating the Wnt antagonist Dickkopf-1. PLoS One. 2011;6(7):e22129. Epub 2011 Jul 19.

Return to top of Publications - Pathology Archives

Search Publications
September 2014 articles:
Visit Animal Care and Use Committee Website
Current Classes
"Interinstitutional Assurance" Agreement (between Johns Hopkins and a company receiving an NIH research award)
Funding from Foundations/Private Sources
Pancreatic Cancer Research Pilot Project Funding Available
Microsoft Faculty Research Fellowship for 2015
Allen Distinguished Investigators Program - Life Science Focus 2014
2014 Martin D. Abeloff Award For Excellence in Public Health and Cancer Control
2014 PCF Global Treatment Sciences (GTSN) Challenge Award For Lethal Prostate Cancer
Burroughs Wellcome Fund - Investigators in the Pathogenesis of Infectious Disease Program
Greenwall Faculty Scholars Program
Camille Dreyfus Teacher-Scholar Awards Program for 2015
Dean's Research Integrity Lectures

This Month's Departmental Listings

Upcoming Deadlines for September, October and November



JHM AppointmentsEmployment @ JHM | Finding a Doctor | Disclaimer | Maps & Directions | Contact JHM 


                                                                                                                                                           The Web Center