Web notes  

May 2016

Pathology Archives

1. Ahearn TU, Pettersson A, Ebot EM, Gerke T, Greaff RE, Morais CL, Hicks JL, Wilson KM, Rider FR, Sesso HD, Fiorentino M, Flavin R, Finn S, Giovannucci EL, Loda M, Stampfer MJ, De Marzo AM, Mucci LA, Lotan TL. A prospective investigation of PTEN loss and ERG expression in lethal prostate cancer. JNCI. 2016 Feb;108(2): djv346 (9 pages).

2. Asch-Kendrick R, Cimino-Mathews A. The role of GATA3 in breast carcinomas: a review. Hum Pathol. 2016 Feb;48:37-47.
Key words: Breast cancer, differential diagnoses, GATA3, immunohistochemistry, surgical pathology

3. Dudley JC, Lin MT, Le DT, Eshleman JR. Microsatellite instability as a biomarker for PD-1 blockade. Clin Cancer Res. 2016 Feb;22:813-20.
Key words: microsatellite, biomarker, PD-1 blockade

4. Epstein JI, Egevad L, Amin MB, Delahunt B, Srigley JR, Humphrey PA; Grading Committee. The 2014 International Society of Urological Pathology (ISUP) Consensus Conference on Gleason Grading of prostatic carcinoma: definition of grading patterns and proposal for a new grading system. Am J Surg Pathol. 2016 Feb;40(2):244-52.
Key words: Gleason, prostate cancer grading, radical prostatectomy, radiation


5. Gupta RK, Xie BH, Patton KT, Lisovsky M, Biurks E, Behrman SW, Klimstra D, Deshpande V. Follicular pancreatitis: a distinct form of chronic pancreatitis-an additional mimic of pancreatic neoplasms. Hum Pathol. 2016 Feb;48:154-62.
Key words: Autoimmune pancreatitis, follicular pancreatitis, IgG4, lymphoma, pancreatitis

6.Kates M, Sopko NA, Han M, Partin AW, Epstein JI. Importance of reporting the Gleason score at the positive surgical margin site: an analysis of 4,082 consecutive radical prostatectomy cases. J Urol Feb. 2016;195:337-42.
Key words: radical prostatectomy, margins, Gleason score


7. Kawahara T, Kashiwagi E, Li Y, Zheng Y, Miyamoto Y, Netto GJ, Ishiguro H, Miyamoto H. Cyclosporine A and tacrolimus inhibit urothelial tumorigenesis. Mol Carcinog. 2016 Feb;55(2):161-9.
Key words: bladder cancer, carcinogenesis, inhibitors, NFAT, neoplastic transformation

8. Kryvenko ON, Balise R, Prakash NS, Epstein JI. African-American men with Gleason score 3+3=6 prostate cancer produce less prostate specific antigen than caucasian men: a potential impact on active surveillance. Urol. 2016 Feb;195(2):301-6.
Key words: PSA, adenocarcinoma of the prostate, active surveillance

9. Lyons JL, Zhang SX. Current laboratory approaches to diagnosis of CNS fungal infections. Future Microbiology. 2016 Feb;11:175-7.
Key words: fungal infection, central nervous system, cerebrospinal fluid, (1,3) -d-glucan, molecular testing

10. Ma C, Gocke CD, Hruban RH, Belchis DA. Mutational spectrum of intraepithelial neoplasia in pancreatic heterotopia. Hum Pathol. 2016 Feb;48:117-21.
Key words: IPMN, incipient IPMN, KRAS, Meckel diverticulum, PanIN

11. Matoso A, Chen YB, Rao V, Wang L, Cheng L, Epstein JI. Atypical renal cysts: a morphologic, immunohistochemical, and molecular study. Am J Surg Pathol. 2016 Feb;40(2):202-11.
Key words: kidney, cysts, renal neoplasia

12. Peng S, Qiu J, Yang A, Yang B, Jeang J, Wang JW, Chang YN, Brayton C, Roden RB, Hung CF, Wu TC. Optimization of heterologous DNA-prime, protein boost regimens and site of vaccination to enhance therapeutic immunity against human papillomavirus-associated disease. Cell Biosci. 2016 Feb 25;6:16.
Key words: HPV, Human papilloma virus, Prime-boost, TA-CIN, pNGVL4a-CRTE6E7L2

13. Shao Q, Fallica J, Casin KM, Murphy E, Steenbergen C, Kohr MJ. Characterization of the sex-dependent myocardial S-nitrosothiol proteome. Am J Physiol Heart Circ Physiol. 2016 Feb 15;310(4):H505-15.
Key words: S-nitrosoglutathione reductase, S-nitrosylation, cardioprotection, endothelial nitric oxide synthase, ischemia-reperfusion injury, sex differences

14. Sokoll LJ, Zhang Z, Chan DW, Reese AC, Bivalacqua TJ, Partin AW, Walsh PC. Do ultrasensitive prostate specific antigen measurements have a role in predicting long-term biochemical recurrence-free survival in men after radical prostatectomy? J Urol. 2016 Feb;195(2):330-6.
Key words: prostate-specific antigen, prostatectomy, prostatic neoplasms, recurrence

15. Sun YY, Peng S, Han L, Qiu J, Song L, Tsai Y, Yang B, Roden RB, Trimble CL, Hung CF, Wu TC. Local HPV recombinant vaccinia boost following priming with an HPV DNA vaccine enhances local HPV-specific CD8+ T-cell-mediated tumor control in the genital tract. Clin Cancer Res. 2016 Feb 1;22(3):657-69.

1. Ahmed A, VandenBussche CJ, Ali SZ, Olson MT. The dilemma of "indeterminate" interpretations of pancreatic neuroendocrine tumors on fine needle aspiration. Diagn Cytopathol 2016 Jan;44(1):10-3.
Key words: indeterminate, suspicious, atypical, PanNET, pancreatic neuroendocrine

2. Allison DB, Miller JA, Coquia SF, Maleki Z. Ultrasonography-guided fine-needle aspiration with concurrent small core biopsy of neck masses and lymph nodes yields adequate material for HPV testing in head and neck squamous cell carcinomas. J Am Soc Cytopathol 2016 Jan/Feb;5(1):22-30.
Key words: Human papillomavirus, squamous cell carcinoma, Human papillomavirus-related head and neck squamous cell carcinoma, fine needle aspiration, ultrasonography

3. Cimino-Mathews A, Thompson E, Taube JM, Ye X, Lu Y, Meeker A, Xu H, Sharma R, Lecksell K, Cornish TC, Cuka N, Argani P, Emens LA. PD-L1 (B7-H1) expression and the immune tumor microenvironment in primary and metastatic breast carcinomas. Hum Pathol 2016 Jan;47(1):52-63.
Key words: Metastatic breast cancer, PD-L1, primary breast cancer, tumor infiltrating lymphocytes; tumor microenvironment

4. Cowan ML, Li QK, Illei PB. CDX-2 expression in primary lung adenocarcinoma. Appl Immunohistochem Mol Morphol. 2016 Jan;24(1):16-9.

5. Faraj SF, Bezerra SM, Yousefi K, Fedor H, Glavaris S, Han M, Partin AW, Humphreys E, Tosoian J, Johnson MH, Davicioni E, Trock BJ, Schaeffer EM, Ross AE, Netto GJ. Clinical validation of the 2005 ISUP Gleason Grading System in a cohort of intermediate and high risk men undergoing radical prostatectomy. PLoS One 2016 Jan;11(1):e0146189.

6. Hulse M, Fader AN, Shan H, Benneh N, Tobian AAR. Massive transfusion in an obstetric emergency. Transfusion 2016 Jan;56:23.

7. Reis LO, Taheri D, Chaux A, Guner G, Mendoza Rodriguez MA, Bivalacqua TJ, Schoenberg MP, Epstein JI1, Netto GJ. Significance of a minor high-grade component in a low-grade noninvasive papillary urothelial carcinoma of bladder. Hum Pathol 2016 Jan;47(1):20-5.

8. Rodriguez FJ. N for nucleus in neurofibromin: new role for an old tumor suppressor? J Neurochem 2016 Jan;136(1):11-2.

9. Schwartz LE, Khani F, Bishop JA, Vang R, Epstein JI. Carcinoma of the uterine cervix involving the genitourinary tract: a potential diagnostic dilemma. Am J Surg Pathol 2016 Jan;40(1):27-35.
Key words: uterine cervix, bladder, HPV

10. Suwantarat N, Romagnoli M, Carroll KC. Photo quiz: isolation of an unusual gram-positive coccus from a positive blood culture in a patient with pneumonia. Clin Microbiol 2016 Jan;54(1):1.
Key words: blood culture, pneumonia, Gram-positive coccus

11. Suwantarat N, Romagnoli M, Carroll KC. Answer to January 2016 Photo Quiz. J Clin Microbiol 2016 Jan;54(1):247.

12. Suwantarat N, Weik C, Romagnoli M, Ellis BC, Kwiatkowski N, Carroll KC. Practical utility and accuracy of matrix-assisted laser desorption ionization-time of flight mass spectrometry for identification of corynebacterium species and other medically relevant coryneform-like bacteria. Am J Clin Pathol 2016 Jan;145(1):22-8.
Key words: mass spectrometry, corynebacterium

1. Bishop JA, Thompson LD, Cardesa A, Barnes L, Lewis JS Jr, Triantafyllou A, Hellquist H, Stenman G, Hunt JL, Williams MD, Slootweg PJ, Devaney KO, Gnepp DR, Wenig BM, Rinaldo A, Ferlito A. Rhabdomyoblastic differentiation in head and neck malignancies other than rhabdomyosarcoma. Head Neck Pathol. 2015 Dec;9(4):507-18.
Key words: Rhabdomysarcoma, Rhabdomyoblastic differentiation, myogenin, MyoD1, head and neck malignancies

2. Celeiro-Muñoz C1, Huebner TA, Robertson SA, Pittman ME, Singhi AD, Arnold CA, Bhaijee F, Voltaggio L, Montgomery EA. Tactile corpuscle-like bodies in gastrointestinal-type mucosa: a case series. Am J Surg Pathol. 2015 Dec;39(12):1668-72.
Key words: corpuscle, gastrointestinal mucosa
PMID: 26291509

3. Diolombi ML, Cheng L, Argani P, Epstein JI. Do clear cell papillary renal cell carcinomas have malignant potential? Am J Surg Pathol. 2015 Dec;39(12):1621-34.
Key words: renal cell carcinoma, renal cell neoplasms, clear cell renal cell carcinoma

4. Gordetsky J, Gorin MA, Canner J, Ball MW, Pierorazio PM, Allaf ME, Epstein JI. Frozen section during partial nephrectomy: does it predict positive margins? BJU Int. 2015 Dec;116(6):868-72.
Key words: frozen section, renal cell carcinoma, kidney neoplasms

5. Hooper JE, Cantor EL, Ehlen MS, Banerjee A, Malempati S, Stenzel P, Woltjer R, Gandour-Edwards R, Goodwin NC, Yang Y, Kaur P, Bult CJ, Airhart SD, Keller C. A patient-derived xenograft model of parameningeal embryonal rhabdomyosarcoma for preclinical studies. Sarcoma. 2015 Dec; article ID 826124:7 pages
Key words: Rhabdomyosarcoma, xenograft, autopsy, lestaurtinib, parameningeal

6. Ide H, Miyamoto H. Steroid hormone receptor signals as prognosticators for urothelial tumor. Dis Markers. Volume 2015 Dec (2015);840640:12 pages
Key words: androgen receptor, estrogen receptor, prognosis, steroid hormone receptor, urothelial cancer

7. Lin EI, Tseng LH, Gocke CD, Reil S, Le DT, Azad NS, Eshleman JR. Mutational profiling of colorectal cancers with microsatellite instability. Oncotarget. 2015 Dec;6(39):42334-44.
Key words: microsatellite instability, colorectal cancer, mutation profiling, mTOR pathway, PTEN


8. Lin MT, Tseng LH, Dudley J, Riel S, Tsai H, Zhen G, Pratz KW, Levis M, Gocke CD. A novel tandem duplication assay to detect minimal residual disease in FLT3/ITD AML. Molecular Diagnosis & Therapy. 2015 Dec;19(6):409-17.
Key words: tandem duplication assay, FLT3/ITD AML


9. Ozluk Y, Taheri D, Matoso A, Sanli O, Berker NK, Yakirevich E, Balasubramanian S, Ross JS, Ali SM, Netto GJ. Renal carcinoma associated with a novel succinate dehydrogenase A mutation: a case report and review of literature of a rare subtype of renal carcinoma. Hum Pathol 2015 Dec;46(12):1951-5.
Key words: Immunohistochemistry; Renal carcinoma; SDHA; SDHB; Succinate dehydrogenase

10. Pittman ME, Voltaggio L, Bhaijee F, Robertson SA, Montgomery EA. Autoimmune metaplastic atrophic gastritis: recognizing precursor lesions for appropriate patient evaluation. Am J Surg Pathol. 2015 Dec;39(12):1611-20.
Key words: metaplastic atrophic gastritis, precursor lesions

11. Sadegh-Nasseri S, Kim A. Exogenous antigens bind MHC class II first, and are processed by cathepsins later. Mol Immunol. 2015 Dec;68(2 Pt A):81-4.
Key words: antigens, cathepsins

12. Suarez MJ, River-Michlig R, Dubovy S, Rodriguez F. Clinicopathological features of ophthalmic neoplasms arising in the setting of xeroderma pigmentosum. Ocul Oncol Pathol. 2016 Dec 2015;2:112-21.
Key words: xeroderma pigmentosum, melanoma, squamous cell carcinoma, immunohistochemistry, eyelid
no PMID available

13. Tian W, Epstein JI. Invasive low-grade papillary urothelial carcinoma: an immunohistochemical study of 26 cases. Hum Pathol. 2015 Dec;46(12):1836-41.
Key words: bladder neoplasm, bladder carcinoma, urothelial carcinoma
http://www.sciencedirect.com/science/article/pii/S0046817715002877 PMID: 26391571

14. Tobian AAR, Adamu T, Reed J, Kiggundu V, Yazdi Y, Njeuhmeli E. Voluntary medical male circumcision: moving from evidence to policy to scale-up in resource constrained settings. Nature Reviews Urology. Dec 2015;12:661-70.
Key words: male circumcision, resource constrained settings, policy


15. Xu L. Animal model of repetitive mild traumatic brain injury for human traumatic axonal injury and chronic traumatic encephalopathy. Neural Regen Res. 2015 Dec;10(11):1731-2.
Key words: traumatic brain injury, traumatic axonal injury, chronic traumatic encephalopathy


1. Arnold CA, Roth R, Arsenescu R, Harzman A, Lam-Himlin DM, Limketkai BN, Montgomery EA, Voltaggio L. Sexually transmitted infectious colitis vs inflammatory bowel disease: distinguishing features from a case-controlled study. Am J Clin Pathol. 2015 Nov;144(5):771-81.
Key words: Centers for Disease Control and Prevention, Crohn disease, Human immunodeficiency virus, Inflammatory bowel disease, Lymphogranuloma venereum, Ulcerative colitis
PMID: 26486742

2. Baras AS, Mitchell CJ, Myers JR, Gupta S, Weng LC, Ashton JM, Cornish TC, Pandey A, Halushka MK. miRge - a multiplexed method of processing small RNA-Seq data to determine microRNA entropy. PLoS One. 2015 Nov 16;10(11):e0143066 (eCollection 2015)
Key words: microRNA, miRge,

3. Bhaijee F, Deyrup A, Montgomery E. Immunosupression-associated soft tissue tumors. Histopathology. 2015 Nov;21(11): 432-7.
Key words: EBV, HHV8, HIV/AIDS, immunosuppression, Kaposi sarcoma http://www.sciencedirect.com/science/article/pii/S1756231715001656
No PMID available

4. Bishop JA, Westra WH. Ciliated HPV-related carcinoma: a well-differentiated form of head and neck carcinoma that can be mistaken for a benign cyst. Am J Surg Pathol. 2015 Nov;39(11):1591-5.
Key words: HPV, carcinoma, cyst
PMID: 26457358

5. Dai H, Rahman A, Saxena A, Jaiswal AK, Mohamood A, Ramirez L, Noel S, Rabb H, Jie C, Hamad AR. Syndecan-1 identifies and controls the frequency of IL-17-producing naïve natural killer T (NKT17) cells in mice. Eur J Immunol. 2015 Nov;45(11):3045-51.
Key words: alphaGalCer, CD138, IFN-?, IL-17, ?NKT cells, Syndecan-1

6. Gorin MA, Rowe SP, Allaf ME, Argani P. Angiomyolipoma with epithelial cysts: Add one to the differential of cystic renal lesions. Int J Urol. 2015 Nov;22(11):1081-2.
Key words: angiomyolipoma, epithelial cyst, renal lesion

7. Grabowski MK, Kigozi G, Gray RH, Armour B, Manucci J, Serwadda D, Redd AD, Nalugoda Patel EU, Wawer MJ, Quinn TC, Tobian AAR. Herpes Simplex Virus type 2 shedding from male circumcision wounds in Rakai Uganda. J Infect Dis. 2015 Nov 15;212(10):1613-7.
Key words: Human immunodeficiency virus (HIV), herpes simplex virus type 2 (HSV-2), male circumcision, viral load, penile viral shedding
PMID: 25943201

8. Kahlert UD, Suwala AK, Raabe EH, Siebzehnrubl FA, Suarez MJ, Orr BA, Bar EE, Maciaczyk J, Eberhart CG. ZEB1 promotes invasion in human fetal neural stem cells and hypoxic glioma neurospheres. Brain Pathol. 2015 Nov;25(6):724-732.
Key words: Glioma, hypoxia, ZEB1, glial-to-mesenchymal transformation, neural stem cell

9. Khurram M, Montgomery E. Lanthanum carbonate-associated injury to the small intestine. Daignostic Histopathology. 2015 Nov;21(11):452-4.
Key words: Kayexalate™ (sodium polystyrene sulfonate), lanthanum carbonate, patiromer, Renvela™ (sevelamer), sodium zirconium cyclosilicate
No PMID available

10. Nagineni CN, Kommineni VK, Ganjbaksh N, Nagineni KK, Hooks JJ, Detrick B. Inflammatory cytokines induce expression of chemokines by human retinal cells: role in chemokine receptor mediated age-related macular degeneration. Aging Dis. 2015 Nov 17;6(6):444-55.
Key words: age-related macular degeneration, retinal pigment epithelium, retina, inflammation, choroidal neovascularization

11. Pittman ME, Montgomery EA. Distinctive clinicopathologic featuresof the common myxoid soft tissue lesions. Diagnostic Histopathology. 2015 Nov;21(11):438-44.
Key words: low grade fibromyxoid sarcoma, myxofibrosarcoma, myxoid liposarcoma, myxoma, superficial angiomyxoma
No PMID available

12. Ramirez L, Hamad AR. From non-obese diabetic to Network for the Pancreatic Organ Donor with Diabetes: New heights in type 1 diabetes research. World J Diabetes. 2015 Nov 25;6(16):1309-11.
Key words: Type 1 diabetes, Network for the Pancreatic Organ Donor with Diabetes, Non-obese diabetic mouse, Transitional type 1 diabetes research

13. Thomas SN, Harlan R, Chen J, Aiyetan P, Liu Y, Sokoll LJ, Aebersold R, Chan DW, Zhang H. Multiplexed targeted mass spectrometry-based assays for the quantification of N-linked glycosite-containing peptides in serum. Anal Chem. 2015 Nov 3;87(21):10830-8.
Key words: N-linked glycopeptides, serum, mass spectrometry, quantification, targeted assays
PMID: 26451657

14. Yang S, Wang M, Chen L, Yin B, Song G, Turko IV, Phinney KW, Betenbaugh MJ, Zhang H, Li S. QUANTITY: an isobaric tag for quantitative glycomics. Sci Rep. 2015 Nov 30;5:17585
Key words: Glycans, isobaric tag, glycosylation, glycomics, high-throughput
PMID: 26616285

15. Yu J, Blackford A, dal Molin M, Wolfgang CL, Goggins M. Time to progression of pancreatic ductal adenocarcinoma from low-to-high tumour stages. Gut. 2015 Nov;64(11):1783-9.
Key words: pancreatic adenocarcinoma, tumor, pancreatic cancer
PMID: 25636698

1. Carter J, Tseng LH, Zheng G, Dudley J, Illei P, Gocke CD, Eshleman JR, Lin MT. Non-p.V600E BRAF mutations are common using a more sensitive and broad detection tool. Am J Clin Pathol. 2015 Oct;144(4):620-8.
Key words: BRAF, lung cancer, colorectal cancer, melanoma, next generation sequencing

2. Chen I, Ou S-S, Marzinke MA, Breaud A, Hughes JP, Richardson, P, Haley DF, Lucas J, Rompalo A, Justman JE, Hodder SA, Eshleman SH. Antiretroviral drug use in a cohort of HIV-uninfected women in the United States: HIV Prevention Trials Network 064. PLoS One. 2015 Oct 7;10(10):e0140074.
Key words: HIV, women, United States, antiretroviral drug


3. Crane GM, Powell H, Kostadinov R, Rocafort PT, Rifkin DE, Burger PC, Ambinder RF, Swinnen LJ, Borowitz MJ, Duffield AS. Primary CNS lymphoproliferative disease, mycophenolate and calcineurin inhibitor usage. Oncotarget. 2015 Oct 20;6(32):33849-66.
Key words: post-transplant lymphoproliferative disorder, primary central nervous system lymphoma, Epstein-Barr virus, mycophenolate mofetil, calcineurin inhibitors


4. Haley L, Tseng LH, Zheng G, Dudley J, Anderson DA, Azad NS, Gocke CD, Eshleman JR, Lin MT. Performance characteristics of next-generation sequencing in clinical mutation detection of colorectal cancers. Mod Pathol. 2015 Oct;28(10):1390-9.
Key words: next generation sequencing, colorectal cancer, analytic performance characteristics

5. Ho CY, Mobley BC, Gordish-Dressman H, VandenBussche CJ, Mason GE, Bornhorst M, Esbenshade AJ, Tehrani M, Orr BA, LaFrance DR, Devaney JM, Meltzer BW, Hofherr SE, Burger PC, Packer RJ, Rodriguez FJ. A clinicopathologic study of diencephalic pediatric low-grade gliomas with BRAF V600 mutation. Acta Neuropathol. 2015 Oct;130(4):575-85.
Key words: BRAF, V600E, diencephalic, hypothalamic, low-grade glioma

6. Kawahara T, Shareef HK, Aljarah AK, Ide H, Li Y, Kashiwagi E, Netto GJ, Zheng Y, Miyamoto H. ELK1 is up-regulated by androgen in bladder cancer cells and promotes tumor progression. Oncotarget. 2015 Oct 6;6(30):29860-76.
Key words: androgen, bladder cancer, ELK1, immunohistochemistry, tumor progression

PMID: 26342199

7. Khani F, Epstein JI. Prostate biopsy specimens with Gleason 3+3=6 and intraductal carcinoma: radical prostatectomy findings and clinical outcomes. Am J Surg Pathol. 2015 Oct;39(10):1383-9.
Key words: Prostatic intraepithelial neoplasia, intraductal carcinoma, prostate neoplasm, Gleason grade
PMID: 26076065

8. Matoso A, Epstein JI. Epithelioid angiosarcoma of the bladder: A series of 9 cases. Am J Surg Pathol. 2015 Oct;39(10):1377-82.
Key words: angiosarcoma, bladder, neoplasm bladder

9. Morais CL, Herawi M, Toubaji A, Albadine R, Hicks J, Netto GJ, De Marzo AM, Epstein JI, Lotan TL. PTEN loss and ERG protein expression are infrequent in prostatic ductal adenocarcinomas and concurrent acinar carcinomas. Prostate. 2015 Oct;75(14):1610-9.
Key words: ERG; PTEN; ductal adenocarcinoma; endometrioid; immunohistochemistry; prostatic adenocarcinoma http://onlinelibrary.wiley.com/doi/10.1002/pros.23042/abstract;
PMID: 26178158

10. Xi Y, Li J, Zhang P, Bai W, Gao N, Bai W, Zhang Y, Wu Y, Ning Y. Upregulation of miRNA-17 and miRNA-19 is associated with unfavorable prognosis in patients with T-cell lymphoblastic lymphoma. Exp Mol Pathol. 2015 Oct;99(2):297-302.
Key words: Lymphoma, T-cell, microRNA, prognosis

11. Yang S, Mishra S, Chen L, Zhou JY, Chan DW, Chatterjee S, Zhang H. Integrated glycoprotein immobilization method for glycopeptide and glycan analysis of cardiac hypertrophy. Anal Chem. 2015 Oct 6;87(19):9671-8.
Key words: iGIG, MS, Glycan, TAC
PMID: 26378618

12. Yu SH, Zheng Q, Esopi D, Macgregor-Das A, Luo J, Antonarakis ES, Drake CG, Vessella R, Morrissey C, De Marzo AM, Sfanos KS. A paracrine role for IL6 in prostate cancer patients: lack of production by primary or metastatic tumor cells. Cancer Immunol Res. 2015 Oct;3(10):1175-84.
Key words: IL-6, prostate cancer, neoangiogenesis, metastasis, microenvironment

13. Zheng G, Tseng LH, Chen G, Haley L, Illei P, Gocke CD, Eshleman JR, Lin MT. Clinical detection and categorization of uncommon and concomitant mutations involving BRAF. BMC Cancer. 2015 Oct;15:779.
Key words: BRAF, mutations
PMID: 26498038

14. Zheng Y, Ishiguro H, Ide H, Inoue S, Kashiwagi E, Kawahara T, Jalalizadeh M, Reis LO, Miyamoto H. Compound A inhibits bladder cancer growth predominantly via glucocorticoid receptor transrepression. Mol Endocrinol. 2015 Oct;29(10):1486-97.
Key words: androgen receptor, bladder cancer, compound A, glucocorticoid receptor, NF-kB

1. Banet N, Ning Y, Montgomery EA. Inflammatory myofibroblastic tumor of the placenta: a report of a novel lesion in 2 patients. Int J Gynecol Pathol 2015 Sep;34(5):419-23.
Key words: myofibroblastic tumor, placenta

2. Bishop JA, Alaggio R, Zhang L, Seethala RR, Antonescu CR. Adamantinoma-like Ewing family tumors of the head and neck: a pitfall in the differential diagnosis of basaloid and myoepithelial carcinomas. Am J Surg Pathol. 2015 Sep;39(9):1267-74.
Key words: basaolid carcinoma, myoepithelial carcinoma, Ewing tumor

3. Bishop JA, Lewis JS Jr, Rocco JW, Faquin WC. HPV-related squamous cell carcinoma of the head and neck: An update on testing in routine pathology practice. Semin Diagn Pathol 2015 Sep;32(5):344-51.
Key words: HPV, head and neck, human papillomavirus, in situ hybridization, p16

4. Gniadek TJ, Singer N, Barker N, Spevak PJ, Crain BJ, Valle D, Halushka MK. Cardiovascular pathologies in mucopolysaccharidosis type VII (Sly Syndrome). Cardiovasc Pathol 2015 Sep-Oct;24(5):322-6.
Key words: Autopsy; Mucopolysaccharidosis; Sly Syndrome

5. Gordetsky J, Epstein JI. Intestinal metaplasia of the bladder with dysplasia: a risk factor for carcinoma? Histopathology 2015 Sep;67(3):325-30.
Key words: intestinal metaplasia, bladder neoplasms, bladder adenocarcinoma
PMID: 25640978

6. Kacker S, Vassallo R, Keller MA, Westhoff CM, Frick KD, Sandler SG, Tobian AA. Financial implications of RHD genotyping of pregnant women with a serologic weak D phenotype. Transfusion. 2015 Sep;55(9):2095-103.
Key words: pregnancy, RHD genotyping, D phenotype
PMID: 25808011

7. Kahlert UD, Suwala AK, Koch K, Natsumeda M, Orr BA, Hayashi M, Maciaczyk J, Eberhart CG. Pharmacologic Wnt inhibition reduces proliferation, survival, and clonogenicity of glioblastoma cells. J Neuropathol Exp Neurol. 2015 Sep;74(9):889-900.
Key words: glioblastoma, Wnt inhibition
PMID: 26222502

8. Kryvenko ON, Rosenberg AE, Jorda M, Epstein JI. Dedifferentiated liposarcoma of the spermatic cord: a series of 42 cases. Am J Surg Pathol 2015 Sep;39(9):1219-25.
Key words: liposarcoma, paratesticular, spermatic cord
PMID: 25828386

9. Lauterbach MD, Notarangelo PL, Lane KS, Koliatsos VE. Treatment of traumatic brain injury-induced dyskinesia with tetrabenazine: a case report. Psychosomatics. 2015 Sep-Oct;56(5):567-71.
Key words: traumatic brain injury, dyskinesia, tetrabenazine
PMID: 25591493

10. Matoso A, Hassan O, Petrozzino F, Rao BV, Carter HB, Epstein JI. Radical prostatectomy findings in men on active surveillance: variable findings dependent on reason for surgery and entry criteria. J Urol. 2015 Sep;194(3):685-9.
Key words: prostate cancer, active surveillance, radical prostatectomy
PMID: 25725419

11. Pletnikova O, Rudow GL, Hyde TM, Kleinman JE, Ali SZ, Bharadwaj R, Gangadeen S, Crain BJ, Fowler DR, Rubio AI, Troncoso JC. Alzheimer lesions in the autopsied brains of people 30 to 50 years of age. Cogn Behav Neurol. 2015 Sep;28(3):144-52.
Key words: Alzheimer's disease, autopsy, brain, lesions
PMID: 26413742

12. Vizcaíno MA, Shah S, Eberhart CG, Rodriguez FJ. Clinicopathologic implications of NF1 gene alterations in diffuse gliomas. Hum Pathol 2015 Sep;46(9):1323-30.
Key words: FISH, glioblastoma, glioma, NF1, neurofibromatosis, neurofibromin

PMID: 26190195

1. Asnaghi L, Gezgin G, Tripathy A, Handa JT, Merbs SL, van der Velden PA, Jager MJ, Harbour JW, Eberhart CG. EMT-associated factors promote invasive properties of uveal melanoma cells. Mol Vis. 2015 Aug 25;21:919-29.
Key words: uveal Melanoma, ZEB1, twist, snail, EMT, invasion
PMID: 26321866

2. Bishop JA, Yonescu R, Epstein JI, Westra WH. A subset of prostatic basal cell carcinomas harbor the MYB rearrangement of adenoid cystic carcinoma. Hum Pathol. 2015 Aug;46(8):1204-8.

PMID: 26089205

3. Borowitz MJ, Wood BL, Devidas M, Loh ML, Raetz EA, Salzer WL, Nachman JB, Carroll AJ, Heerema NA, Gastier-Foster JM, Willman CL, Dai Y, Winick NJ, Hunger SP, Carroll WL, Larsen E. Prognostic significance of minimal residual disease in high risk B-ALL: a report from Children's Oncology Group study AALL0232.
Blood. 2015 Aug 20;126(8):964-71

PMID: 26124497

4. Brosens LA, Hackeng WM, Offerhaus GJ, Hruban RH, Wood LD. Pancreatic adenocarcinoma pathology: changing "landscape". J Gastrointest Oncol. 2015 Aug;6(4):358-74.
PMID: 26261723

5. Chen I, Connor MB, Clarke W, Marzinke MA, Cummings V, Breaud A, Fogel JM, Laeyendecker O, Fields SD, Donnell D, Griffith S, Scott HM, Shoptaw S, Del Rio C, Magnus M, Mannheimer S, Wheeler DP, Mayer KH, Koblin BA, Eshleman SH. Antiretroviral drug use and HIV drug resistance among HIV-infected Black men who have sex with men: HIV Prevention Trials Network 061. J Acquir Immune Defic Synd. 2015 Aug;69(4):446-52.
Key words: HIV, drug resistance, Black, MSM, antiretroviral

6. Fogel JM, Piwowar-Manning E, Donohue K, Cummings V, Marzinke MA, Clarke W, Breaud A, Fiamma A, Donnell D, Kulich M, Mbwambo JK, Richter L, Gray G, Sweat M, Coates TJ, Eshleman SH. Determination of HIV status in African adults with discordant HIV rapid tests. J Acquir Immune Defic Syndr. 2015 Aug;69(4):430-8.
Key words: HIV, rapid test, Africa

7. Grabowski MK, Gray RH, Makumbi F, Kagaayi J, Redd AD, Kigozi G, Reynolds SJ, Nalugoda F, Lutalo T, Wawer MJ, Serwadda D, Quinn TC, Tobian AAR. Use of injectable hormonal contraception and women's risk for herpes simplex virus type 2 acquisition: a prospective study of couples in Rakai, Uganda. Lancet Global Health. 2015 Aug;3:e478-86.

PMID: 26094162

8. Heaphy CM, Asch-Kendrick R, Argani P, Meeker AK, Cimino-Mathews A. Telomere length alterations unique to invasive lobular carcinoma. Hum Pathol. 2015 Aug;46(8):1197-203.
Key words: telomeres, lobular carcinoma, breast cancer
PMID: 26092192

9. Heaphy CM, Gaonkar G, Peskoe SB, Joshu CE, De Marzo AM, Lucia MS, Goodman PJ, Lippman SM, Thompson IM, Jr., Platz EA, Meeker AK. Prostate stromal cell telomere shortening is associated with risk of prostate cancer in the placebo arm of the Prostate Cancer Prevention Trial. Prostate. 2015 Aug;75(11):1160-6.
Key words: telomeres, tumor microenvironment, prostate cancer, stroma, risk biomarker
PMID: 25893825

10. Ling JP, Pletnikova O, Troncoso JC, Wong PC. TDP-43 repression of nonconserved cryptic exons is compromised in ALS-FTD. Science 2015 Aug 7;349(6248):650-5.
Key words: ALS, FTD, TDP-43, cryptic exons, splicing repression http://www.sciencemag.org/content/349/6248/650.full
PMID: 26250685

11. Sfanos KS, Canene-Adams K, Hempel H, Yu SH, Simons BW, Schaeffer AJ, Schaeffer EM, Nelson WG, De Marzo AM. Bacterial prostatitis enhances 2-amino-1-methyl-6-phenylimidazo[4,5-b]pyridine (PhIP)-induced cancer at multiple sites. Cancer Prev Res (Phila). 2015 Aug;8(8):683-92.
Key words: Prostate cancer, PhIP, infection, inflammation

12. Suwantarat N, Adams LL, Romagnoli M, Carroll KC. Fatal case of Herbaspirillum seropedicae bacteremia secondary to pneumonia in an end-stage renal disease patient with multiple myeloma. Diagn Microbiol Infect Dis. 2015 Aug;82(4):331-3.
Key words: non-fermenter, gram negative rod, sepsis, pneumonia, multiple myeloma
PMID: 25976156

1. Amukele T, Sokoll LJ, Pepper D, Howard DP, Street J. Can unmanned aerial systems (drones) be used for the routine transport of chemistry, hematology, and coagulation laboratory specimens? PLoS One. 2015 Jul 29;10(7):e0134020.
Key words: drones, laboratory specimens, transport
PMID: 26222261

2. Baras AS, Gandhi N, Munari E, Faraj S, Shultz L, Marchionni L, Schoenberg M, Hahn N, Hoque M, Berman D, Bivalacqua TJ, Netto G. Identification and validation of protein biomarkers of response to neoadjuvant platinum chemotherapy in muscle invasive urothelial carcinoma. PLoS One.2015 Jul 31;10(7):e0131245.
Key words: chemotherapy, urothelial carcinoma, protein biomarkers, neoadjuvant platinum chemotherapy
PMID: 26230923

3. Collins J, Rossi ED, Chandra A, Ali SZ. Terminology and nomenclature schemes for reporting thyroid cytopathology: an overview. Semin Diagn Pathol. 2015 Jul;32(4):258-63.
Key words: Cytopathology; FNA; Nomenclature; Reporting; Terminology; Thyroid
PMID: 25680862

4. Das S, Halushka MK. Extracellular vesicle microRNA transfer in cardiovascular disease. Cardiovasc Pathol. 2015 Jul-Aug;24(4):199-206.
Key words: Cardiovascular disease; Exosome; Microvesicle; miRNA
PMID: 25958013

5. Fontes JA, Rose NR, ?iháková D. The varying faces of IL-6: from cardiac protection to cardiac failure. Cytokine. 2015 Jul;74(1):62-68.
Key words: Heart failure; IL6; Myocarditis; Trans-signaling; gp130
PMID: 25649043

6. Lai H, Stitzer M, Treisman G, Moore R, Brinker J, Gerstenblith G, Kickler TS, Li J, Chen S, Fishman E, Lai S. Cocaine abstinence and reduced use associated with lowered marker of endothelial dysfunction in African Americans: a preliminary study. J Addict Med 2015 Jul-Aug;9(4):331-9.
Key words: African Americans, cocaine use, coronary plaque progression, endothelin-1, incidence
PMID: 26164164

7. Pagano MB, Ness PM, Chajewski OS, King KE, Wu Y, Tobian AA. Hypotensive transfusion reactions in the era of prestorage leukoreduction. Transfusion 2015 Jul;55(7):1668-74.
Key words: hypotension, transfusion, prestorage leukoreduction
PMID: 25731668

8. Perica K, Bieler JG, Schütz C, Varela JC, Douglass J, Skora A, Chiu YL, Oelke M, Kinzler K, Zhou S, Vogelstein B, Schneck JP. Enrichment and expansion with nanoscale artificial antigen presenting cells for adoptive immunotherapy. ACS Nano 2015 Jul 28;9(7):6861-71.
Key words: adoptive immunotherapy, immunotherapy, nanoparticles
PMID: 26171764

9. Sadegh-Nasseri S, Kim A. MHC Class II Auto-antigen processing and presentation is unconventional. Front Immunol 2015 Jul 22;6:372.
Key words: HLA-DR antigens; auto-antigens; cathepsin sensitivity; cell free antigen-processing system; extracellular processing; immunodominance; paralyzed DC
PMID: 2625773

10. Saxena A, Khosraviani S, Noel S, Mohan D, Donner T, Hamad AR. Interleukin-10 paradox: A potent immunoregulatory cytokine that has been difficult to harness for immunotherapy. Cytokine. 2015 Jul;74(1):27-34.
Key words: Interleukin-10, autoimmunity, Fas pathway, gld; B-cells
PMID: 25481648

11. Schroeder LF, Elbireer A, Jackson JB, Amukele TK. Laboratory diagnostics market in East Africa: a survey of test types, test availability, and test prices in Kampala, Uganda. PLoS One 2015 Jul 30;10(7):e0134578.
Key words: Kampala, Uganda, laboratory diagnostics, testing
PMID: 26226183

12. Sun Y, Peng S, Qiu Y, Miao J, Yang B, Jeang J, Hung CF, Wu TC. Intravaginal HPV DNA vaccination with electroporation induces local CD8+ T-cell immune responses and antitumor effects against cervicovaginal tumors. Gene Ther 2015 Jul;22(7): 528-35.
Key words: electroporation, HPV DNA vaccination, CD8+, cervicovaginal tumors
PMID: 25786869

13. VandenBussche CJ, Cimino-Mathews A, Park BH, Emens LA, Tsangaris TN, Argani P. Reflex estrogen receptor/progesterone receptor/human epidermal growth factor receptor 2 (ER/PR/Her2) analysis of breast cancers in needle core biopsy specimens dramatically increases health care costs. Am J Surg Pathol 2015 Jul;39(7):939-47.
Key words: breast, biomarker, cancer, estrogen receptor, Her2
PMID: 25871620

14. Wang JW, Jagu S, Wu WH, Viscidi RP, Macgregor-Das A, Fogel JM, Kwak K, Daayana S, Kitchener H, Stern PL, Gravitt PE, Trimble CL, Roden RB. Seroepidemiology of human papillomavirus 16 (HPV16) L2 and generation of L2-specific human chimeric monoclonal antibodies. Clin Vaccine Immunol. 2015 Jul;22(7):806-16.
Key words: human papillomavirus, monoclonal antibodies
PMID: 25972404

15. Yu Y, Gaillard S, Phillip JM, Huang TC, Pinto SM, Tessarollo NG, Zhang Z, Pandey A, Wirtz D, Ayhan A, Davidson B, Wang TL, Shih IeM. Inhibition of spleen tyrosine kinase potentiates paclitaxel-induced cytotoxicity in ovarian cancer cells by stabilizing microtubules. Cancer Cell 2015 Jul;28(1):82-96.
Key words: spleen, tyrosine kinase, ovarian cancer, microtubules
PMID: 26096845

1. Bagnasco SM, Kraus ES. Intimal arteritis in renal allografts: new takes on an old lesion. Curr Opin Organ Transplant. 2015 Jun;20(3):343-7.
Key words: arteritis, renal allograft

2. Halushka MK, Eng G, Collins AB, Judge DP, Semigran MJ, Stone JR. Optimization of serum immunoglobulin free light chain analysis for subclassification of cardiac amyloidosis. J Cardiovasc Transl Res. 2015 Jun;8(4):264-8.
Key words: immunoglobulin, cardiac amyloidosis

3. Iacono D, Zandi P, Gross M, Markesbery WR, Pletnikova O, Rudow G, Troncoso JC. APO?2 and education in cognitively normal older subjects with high levels of AD pathology at autopsy: findings from the Nun Study. Oncotarget. 2015 Jun 10;6(16):14082-91.
Key words: AD pathology, APO?2, Gerotarget, higher education and language skills, neuronal hypertrophy

4. Jhaveri TZ, Woo J, Shang X, Park BH, Gabrielson E. AMP-activated kinase (AMPK) regulates activity of HER2 and EGFR in breast cancer. Oncotarget. 2015 Jun 20;6(17):14754-65.
Key words: MP-activated protein kinase (AMPK); EGFR; HER2; cancer cell metabolism; cancer therapy

5. Kim AR, Sadegh-Nasseri S. Determinants of immunodominance for CD4 T cells. Curr Opin Immonol. 2015 June;34:9-15.
Key words: auto-antigen processing, HLA-DR, HLA-DM, Cathepsins, auto-antigen selection

6. Nauen DW, Guajardo A, Haley L, Powell K, Burger PC, Gocke CD. Chromosomal defects track tumor subpopulations and change in progression in oligodendroglioma. Coverg Sci Phys Oncol 2015 June;1(1):015001.
Key words: oligodendroglioma, chromosomal defects, tumor
no PMID available

7. Rose NR. Molecular mimicry and clonal deletion: A fresh look. J Theor Biol. 2015 Jun 21;375:71-6.
Key words: Clonal deletion, molecular mimicry, adaptive immunity, autoimmunity, immunoregulation

8. Savonenko AV, Melnikova T, Wang Y, Ravert H, Gao Y, Koppel J, Lee D, Pletnikova O, Cho E, Sayyida N, Hiatt A, Troncoso J, Davies P, Dannals RF, Pomper MG, Horti AG. Cannabinoid CB2 receptors in a mouse nodel of A? amyloidosis: immunohistochemical analysis and suitability as a PET biomarker of neuroinflammation. PLoS One. 2015 Jun 18;10(6):e0129618.
Key words: CB2 receptors, Alzheimer' disease, PET, microglia, engulfment synapses

9. Smith NE, Epstein JI, Parwani AV, Netto GJ, Illei PB, Powell K, Allaf ME, Argani P. Smooth muscle and adenoma-like renal tumor: a previously unreported variant of mixed epithelial stromal tumor or a distinctive renal neoplasm? Hum Pathol. 2015 Jun;46(6):894-905.
Key words: renal, neoplasm, MEST

10. Su M, Alonso S, Jones JW, Yu J, Kane MA, Jones RJ, Ghiaur G. All-trans retinoic acid activity in acute myeloid leukemia: role of cytochrome P450 enzyme expression by the microenvironment. PLoS One. 2015 Jun 5;10(6):e0127790.
Key words: acute myeloid leukemia, cytochrome P450, enzyme expression

11. White MJ, Hazard SW 3rd, Frank SM, Boyd JS, Wick EC, Ness PM, Tobian AA. The evolution of perioperative transfusion testing and blood ordering. Anesth Analg. 2015 Jun;120(6):1196-203.
Key words: blood transfusion, blood ordering
PMID: 25988630

12. Yang B, Yang A, Peng S, Pang X, Roden RB, Wu TC, Hung CF. Co-administration with DNA encoding papillomavirus capsid proteins enhances the antitumor effects generated by therapeutic HPV DNA vaccination. Cell Biosci 2015 Jun 25;5:35.
Key words: DNA, papillomavirus, antitumor, HPV vaccination

1. Cimino-Mathews A, Foote JB, Emens LA. Immune targeting in breast cancer. Oncology (Williston Park). 2015 May;29(5):375-85.
Key words: immune system, tumor infiltrating lymphocytes, PD-L1, breast carcinoma, immunotherapy

2. Eshleman JR, Norris AL, Sadakari Y, Debeljak M, Borges M, Harrington C, Lin E, Brant A, Barkley T, Almario JA, Topazian M, Farrell J, Syngal S, Lee JH, Yu J, Hruban RH, Kanda M, Canto MI, Goggins M. KRAS and guanine nucleotide-binding protein mutations in pancreatic juice collected from the duodenum of patients at high risk for neoplasia undergoing endoscopic ultrasound. Clin Gastroenterol Hepatol. 2015 May;13(5):963-9.
Key words: screening, EUS, early detection, IPMN, PDAC
PMID: 25481712

3. Faraj SF, Chaux A, Gonzalez-Roibon N, Munari E, Cubilla AL, Shih IeM, Netto GJ. Immunohistochemical expression of ARID1A in penile squamous cell carcinomas: a tissue microarray study of 112 cases. Hum Pathol. 2015 May;46(5):761-6.
Key words: ARID1A, BAF250A, penile SCC, SWI/SNF, mTOR pathway

4. Gold B, Cankovic M, Furtado LV, Meier F, Gocke CD. Do circulating tumor cells, exosomes, and circulating tumor nucleic acids have clinical utility? A report of the Association for Molecular Pathology. J Mol Diagn. May 2015;17(3):209-24.
Key words: circulating tumor DNA, circulating tumor cells

5. Kantor R, Smeaton L, Vardhanabhuti S, Hudelson SE, Wallis CL, Tripathy S, Morgado MG, Saravanan S, Balakrishnan P, Reitsma M, Hart S, Mellors JW, Halvas E, Grinsztejn B, Hosseinipour MC, Kumwenda J, La Rosa A, Lalloo UG, Lama JR, Rassool M, Santos BR, Supparatpinyo K, Hakim J, Flanigan T, Kumarasamy N, Campbell TB, Eshleman SH, AIDS Clinical Trials Group (ACTG) A5175 Study Team. Pre-treatment HIV drug resistance and HIV-1 subtype Care independently associated with virologic failure: Results from the multi-national PEARLS (ACTG A5175) clinical trial. Clin Infect Dis. 2015 May;60(10):1541-9.
Key words: HIV, resistance, subtype, treatment

6. Kawahara T, Kashiwagi E, Ide H, Li Y, Zheng Y, Ishiguro H, Miyamoto H. The role of NFATc1 in prostate cancer progression: Cyclosporine A and tacrolimus inhibit cell proliferation, migration, and invasion. Prostate. 2015 May;75:573-84.
Key words: Immunosuppressants, nuclear factor of activated T-cells, prostate cancer

7. Kulac I, Haffner MC, Yegnasubramanian S, Epstein JI, De Marzo AM. Should Gleason 6 be labeled as cancer? Curr Opin Urol. 2015 May;25(3):238-45.
Key words: active surveillance, Gleason score, prostate cancer

8. Li Y, Shah P, De Marzo AM, Van Eyk JE, Li Q, Chan DW, Zhang H. Identification of glycoproteins containing specific glycans using a lectin-chemical method. Anal Chem. 2015 May;87(9):4683-7.
Key words: glycoprotein, glycans, solid-phase extraction of glycopeptides (SPEG), mass spectrometry, hydrazide chemistry

9. Peterson DA, Planer JD, Guruge JL, Xue L, Downey-Virgin W, Goodman AL, Seedorf H, Gordon JI. Characterizing the interactions between a naturally primed immunoglobulin A and its conserved bacteroides thetaiotaomicron species-specific epitope in gnotobiotic mice. J Biol Chem. 2015 May 15;290(20):12630-49.
Key words: immunoglobulin A; immunoglobulin A (IgA); microbiome; molecular evolution; mucosal immunology; symbiosis

10. Pittman ME, Brunt EM. Anatomic pathology of hepatocellular carcinoma: histopathology using classic and new diagnostic tools. Clin Liver Dis. 2015 May;19(2):239-59.
Key words: hepatocellular carcinoma, hepatocellular adenoma, arginase-1, glypican-3, glutamine synthetase

11. Shah RB, Bentley J, Jeffery Z, DeMarzo AM. Heterogeneity of PTEN and ERG expression in prostate cancer on core needle biopsies: implications for cancer risk stratification and biomarker sampling. Hum Pathol. 2015 May;46(5):698-706.
Key words: biomarkers, heterogeneity, PTEN, ERG, prostate cancer

12. Shyam R, Ren Y, Lee J, Braunstein KE, Mao HQ, Wong PC. Intraventricular delivery of siRNA nanoparticles to the central nervous system. Mol Ther Nucleic Acids. 2015 May 12;4:e242.
Key words: nanoparticles, siRNA, Alzheimer's Disease, central nervous system

13. Suwantarat N, Dalton JB, Lee R, Green R, Memon W, Carroll KC, Riedel S, Zhang SX. Large-scale clinical validation of a lateral flow immunoassay for detection of cryptococcal antigen in serum and cerebrospinal fluid specimens. Diagn Microbiol Infect Dis. 2015 May;82(1):54-6.
Key words: antigen, cerebrospinal fluid, Cryptococcus, lateral flow immunoassay, serum

14. Thomas SN, Zhang H, Cotter RJ. Application of quantitative proteomics to the integrated analysis of the ubiquitylated and global proteomes of xenograft tumor tissues. Clin Proteomics. 2015 May 20;12(1):14.
Key words: mass spectrometry, proteomics, quantification, ubiquitylation, tissue
PMID: 26019700

15. Toghi Eshghi S, Shah P, Yang W, Li X, Zhang H. GPQuest: a spectral library matching algorithm for site-specific assignment of tandem mass spectra to intact N-glycopeptides. Anal Chem. 2015 May 19;87(10):5181-8.
Key words: glycoprotein, higher-energy collisional dissociation (HCD) fragmentation, N-glycans, experimental spectral library (ESL), mass spectrometry

1. Bezerra SM, Chaux A, Ball MW, Faraj SF, Munari E, Gonzalez-Roibon N, Sharma R, Bivalacqua TJ, Burnett AL, Netto GJ. Human papillomavirus infection and immunohistochemical p16(INK4a) expression as predictors of outcome in penile squamous cell carcinomas. Hum Pathol 2015 Apr;46(4):532-40.
Key words: penile cancer, squamous cell carcinomas HPV, p16INK4a, p16INK4a, immunohistochemistry, in situ hybridization

2. Burbulis IE, Yamaguchi K, Nikolskaia OV, Prigge ST, Magez S, Bisser S, Reller ME, Grab DJ. Detection of pathogen-specific antibodies by loop-mediated isothermal amplification. Clin Vaccine Immunol 2015 Apr;22(4):374-80.

3. Dal Molin M, Zhang M, de Wilde RF, Ottenhof NA, Rezaee N, Wolfgang CL, Blackford A, Vogelstein B, Kinzler KW, Papadopoulos N, Hruban RH, Maitra A, Wood LD. Very long-term survival following resection for pancreatic cancer is not explained by commonly mutated genes: results of whole-exome sequencing analysis. Clin Cancer Res 2015 Apr 15;21(8):1944-50.

4. Farley JE, Hayat MJ, Sacamano PL, Ross T, Carroll K. Prevalence and risk factors for methicillin-resistant Staphylococcus aureus in an HIV-positive cohort. Am J Infect Control 2015 Apr 1;43(4):329-35.
Key words: MRSA, S. aureus, HIV, surveillance, epidemiology http://www.sciencedirect.com/science/article/pii/S019665531401431X

5. Rodriguez FJ, Schniederjan MJ, Nicolaides T, Tihan T, Burger PC, Perry A. High rate of concurrent BRAF-KIAA1549 gene fusion and 1p deletion in disseminated oligodendroglioma-like leptomeningeal neoplasms (DOLN). Acta Neuropathol 2015 Apr;129(4):609-10.

6. Tobian AAR, Kigozi G, Manucci J, Grabowski MK, Serwadda D, Musoke R, Redd AD, Nalugoda F, Reynolds SJ, Kighoma N, Laeyendecker O, Lessler J, Gray RH, Quinn TC, Wawer MJ and the Rakai Health Sciences Program. HIV shedding from male circumcision wounds in HIV-infected men: a prospective cohort study. PLoS Medicine. 2015;12(4):e1001820.

7. Wang CC, De Marzo AM, Lotan TL, Epstein JI. Overlap of CD44 expression between prostatic small cell carcinoma and acinar adenocarcinoma. Hum Pathol. 2015 Apr;46(4):554-7.
Key words: prostate cancer, small cell carcinoma, cd44
PMID: 25656929

1. Argani P. MiT family translocation renal cell carcinoma. Semin Diagn Pathol. 2015 Mar;32(2):103-13.
Key words: Renal, carcinoma, TFEB, TFE3

2. Argani P, Lewin JR, Edmonds P, Netto GJ, Prieto-Granada C, Zhang L, Jungbluth AA, Antonescu CR. Primary renal sclerosing epithelioid fibrosarcoma: report of 2 cases with EWSR1-CREB3L1 gene fusion. Am J Surg Pathol. 2015 Mar;39(3):365-73.
Key words: Renal, sarcoma, translocation, fibrosarcoma

3. Faraj SF, Munari E, Guner G, Taube J, Anders R, Hicks J, Meeker A, Schoenberg M, Bivalacqua T, Drake C, Netto GJ. Assessment of tumoral PD-L1 expression and intratumoral CD8+ T cells in urothelial carcinoma. Urology.2015 Mar;85(3):703.e1-6.
Key words: urothelial carcinoma, PD-L1 expression, T cells, CD8+
PMID: 25733301

4. Ishiguro H, Izumi K, Kashiwagi E, Zheng Y, Li Y, Kawahara T, Miyamoto H. Semenogelin I promotes prostate cancer cell growth via functioning as an androgen receptor coactivator and protecting against zinc cytotoxicity. Am J Cancer Res. 2015 Mar; 5(2):738-47.
Key words: androgen receptor, prostate cancer, prostate-specific antigen, semenogelin, zinc
No PMID available

5. Norris AL, Roberts NJ, Jones S, Wheelan SJ, Papadopoulos N, Vogelstein B, Kinzler KW, Hruban RH, Klein AP, Eshleman JR. Familial and sporadic pancreatic cancer share the same molecular pathogenesis. Fam Cancer. 2015 Mar;14(1):95-103.
Key words: pancreatic cancer, molecular pathogenesis

6. Ong S, Ligons DL, Barin JG, Wu L, Talor MV, Diny N, Fontes JA, Gebremariam E, Kass DA, Rose NR, ?iháková D. Natural killer cells limit cardiac inflammation and fibrosis by halting eosinophil infiltration. Am J Pathol. 2015 Mar;185(3):847-61.
Key words: cardiac inflammation, killer cells, fibrosis, eosinophils

7. Onur I, Rosenthal DL, VandenBussche CJ. Atypical urothelial tissue fragments in noninstrumented voided urine specimens are associated with low but significantly higher rates of urothelial neoplasia than benign-appearing urothelial tissue fragments. Cancer Cytopathol. 2015 Mar;123(3):186-92.
Key words: urine, urothelial carcinoma, urothelial neoplasia, high-grade urothelial carcinoma, bladder cancer

8. Onur I, Rosenthal DL, VandenBussche CJ. Benign-appearing urothelial tissue fragments in noninstrumented voided urine specimens are associated with low rates of urothelial neoplasia. Cancer Cytopathol. 2015 Mar;123(3):180-5.
Key words: urine, urothelial carcinoma, urothelial neoplasia, bladder cancer, papillary neoplasm of low malignant potential

9. Rooper L, Sharma R, Bishop JA. Polymorphous low grade adenocarcinoma has a consistent p63+/p40- immunophenotype that helps distinguish it from adenoid cystic carcinoma and cellular pleomorphic adenoma. Head Neck Pathol. 2015 Mar;9(1):79-84.
Key words: Polymorphous low grade adenocarcinoma, adenoid cystic carcinoma, pleomorphic adenoma, p40, p63

10. Rosenberg AZ, Naicker S, Winkler CA, Kopp JB. HIV-associated nephropathies: epidemiology, pathology, mechanisms and treatment. Nat Rev Nephrol. 2015 March; 11(3): 150-60.
Key words: HIV, kidney disease, ApoL1, combined antiretroviral therapy

11. Sumpio BJ, Chitragari G, Moriguchi T, Shalaby S, Pappas-Brown V, Khan AM, Sekaran SD, Sumpio BE, Grab DJ. African Trypanosome-induced blood-brain barrier dysfunction under shear stress may not require ERK activation. Int J Angiol. 2015 Mar;24(01):41-6.
Key words: trypanosome, blood-brain barrier dysfunction, ERK activation

No PMID available

12. Uchida K, Ross H, Lotan T, Pignon JC, Signoretti S, Epstein JI, Illei PB. ?Np63 (p40) expression in prostatic adenocarcinoma with diffuse p63 positivity. Hum Pathol. 2015 Mar;46(3):384-9.
Key words: prostate, adenocarcinoma, ?Np63, p40, p63

1. Brandt WD, Schreck KC, Bar EE, Taylor I, Marchionni L, Raabe E, Eberhart CG, Rodriguez FJ. Notch signaling activation in pediatric low-grade astrocytoma. J Neuropathol Exp Neurol. 2015 Feb;74(2):121-31.
Key words: pilocytic astrocytoma, notch signaling activation, pediatrics

2. Dudley J, Tseng LH, Rooper L, Harris M, Haley L, Chen G, Gocke CD, Eshleman JR, Lin MT. Challenges posed to pathologists in the detection of KRAS mutations in colorectal cancers. Arch Pathol Lab Med. 2015 Feb;139(2):211-8.
Key words: KRAS, colorectal cancer, adjuvant therapy
PMID: 25611103

3. Goel R, Ness PM, Takemoto C, King KE, Krishnamurti L, Tobian AAR. Platelet transfusions in platelet consumptive disorders are associated with in-hospital arterial thrombotic complications and mortality. Blood. 2015; 125(9):1470-6.
Key words: platelets, platelet disorders, arterial thrombotic complications
PMID: 25588677

4. Kaufman RM, Djulbegovic B, Gernsheimer T, Kleinman S, Tinmouth AT, Capocelli KE, Cipolle MD, Cohn CS, Fung MK, Grossman BJ, Mintz PD, O'Malley BA, Sesok-Pizzini DA, Shander A, Stack GE, Webert KE, Weinstein R, Welch BG, Whitman GJ, Wong EC, Tobian AAR. Platelet transfusion: a clinical practice guideline from the AABB. Annals of Internal Medicine. 2015 Feb;162:205-13.
Key words: platelet transfusion, blood bank, clinical practice guidelines

5. Kern JB, Hii A, Kruse MJ, Szabo Z, Argani P, Hibbard MK, Gladstone DE, Meyer C, Zheng R, Borowitz MJ, Duffield AS. A Leukemic presentation of alveolar rhabdomyosarcoma in a 52-year-old woman without an identifiable primary tumor. Int J Surg Pathol. 2015 Feb;23(1):757.
Key words: alveolar rhabdomyosarcoma, bone marrow, cytogenetics, flow cytometry, immunohistochemistry

1. Amukele TK, Schroeder LF, Jackson JB, Elbireer A. Most clinical laboratory testing in Kampala occurs in high-volume, high-quality laboratories or low-volume, low-quality laboratories. A tale of two cities. Am J Clin Pathol. 2015 Jan;143(1):50-6.
Key words: Quality improvement, point of care, test utilization, global health, Uganda

2. Ball MW, Partin AW, Epstein JI. Extent of extraprostatic extension independently influences biochemical recurrence-free survival: Evidence for further pT3 sub-classification. Urology. 2015 Jan;85:161-4.
Key words: prostate adenocarcinoma, prostate cancer stage, prostate cancer recurrence

3. Banet N, Gown AM, Shih IM, Kay Li Q, Roden RB, Nucci MR, Cheng L, Przybycin CG, Nasseri-Nik N, Wu LS, Netto GJ, Ronnett BM, Vang R. GATA-3 expression in trophoblastic tissues: an immunohistochemical study of 445 cases, including diagnostic utility. Am J Surg Pathol. 2015 Jan;39(1):101-8.
Key words: GATA-3, trophoblast, immunohistochemistry

4. Chen G, Dudley J, Tseng LH, Smith K, Gurda GT, Gocke CD, Eshleman JR, Lin MT. Lymph node metastases of melanoma: challenges for BRAF mutation detection. Hum Pathol. 2015 Jan;46(1):113-9.
Key words: lymph node, metastasis, melanoma, BRAF mutation

5. Eberhart CG, Orr BA. Molecular pathways: not a simple tube-the many functions of blood vessels. Clin Cancer Res. 2015 Jan;21(1):18-23.
Key words: blood vessels, molecular pathways

6. Ellis CE, Epstein JI. Metastatic prostate adenocarcinoma to the penis: a series of 29 cases with predilection for ductal adenocarcinoma. Am J Surg Pathol Jan 2015;39:67-74.
Key words: prostate adenocarcinoma, ductal adenocarcinoma, penis carcinoma
no PMID available

7. Kacker S, Ness PM, Shirey RS, Savage WJ, King KE, Tobian AAR. The future of red blood cell alloimmunization risk reduction. Transfusion. 2015 Jan;55(1):222-4.
Key words: red blood cells, alloimmunization

8. Kawahara T, Kashiwagi E, Ide H, Li Y, Zheng Y, Miyamoto Y, Netto GJ, Ishiguro H, Miyamoto H. Cyclosporine A and tacrolimus inhibit bladder cancer growth through down-regulation of NFATc1. Oncotarget . 2015 Jan;6(3):1582-93.
Key words: Bladder cancer, cyclosporine, NFAT, tacrolimus, tumor progression

9. Lyons JL, Thakur KT, Lee R, Watkins T, Pardo CA, Carson KA, Markley B, Finkelman MA, Marr KA, Roos KL, Zhang SX. Utility of measuring (1,3) ?-D-glucan in cerebrospinal fluid for the diagnosis of fungal central nervous system infection. J Clin Microbiol. 2015 Jan;53(1):319-22.
Key words: cerebrospinal fluid, central nervous system infection, B-D-glucan

10. Munari E, Chaux A, Maldonado L, Compérat E, Varinot J, Bivalacqua TJ, Hoque MO, Netto GJ. Cyclin A1 expression predicts progression in pT1 Urothelial carcinoma of bladder: a tissue microarray study of 149 patients treated by transurethral resection. Histopathology. 2015 Jan;66(2):262-9.
Key words: biomarkers, bladder cancer, progression, pT1

11. Piwowar-Manning E, Fogel JM, Richardson P, Wolf S, Clarke W, Marzinke M, Fiamma A, Donnell D, Kulich M, Mbwambo JKK, Richter L, Gray G, Sweat M, Coates TJ, Eshleman SH. Performance of the fourth-generation Bio-Rad GS HIV Combo Ag/Ab Enzyme Immunoassay for diagnosis of HIV infection in Africa. J Clin Virol. 2015 Jan;62:75-9.
Key words: HIV, diagnosis, fourth generation, Africa

12. Tian W, Guner G, Miyamoto H, Cimino-Mathews A, Gonzalez-Roibon N, Argani P, Li X, Sharma R, Subhawong AP, Rezaei K, Bivalacqua TJ, Epstein JI, Bishop JA, Netto GJ. Utility of uroplakin II expression as a marker of urothelial carcinoma. Hum Pathol. 2015 Jan;46(1):58-64.
Key words: Bladder cancer; Breast carcinoma; GATA3; Immunohistochemistry; Uroplakin II
PMID: 25449628

13. Voltaggio L, Montgomery E. Gastrointestinal tract spindle cell lesions-just like real estate, it's all about location. Mod Pathol. 2015 Jan;28 Suppl 1:S47-66.
Key words: Gastrointestinal, spindle cell, mesenchymal

14. Waters KM, Ali SZ, Erozan YS, Olson MT. Smoldering medullary thyroid carcinoma liver metastasis 37 years after resection of an organ-confined tumor. Diagn Cytopathol. 2015 Jan;43(1):45-8.
Key words: calcitonin, liver, medullary thyroid carcinoma, metastasis, thyroid
PMID: 24550155

15. Zhong M, Tian W, Zhuge J, Zheng X, Huang T, Cai D, Zhang D, Yang XJ, Argani P, Fallon JT, Epstein JI. Distinguishing nested variants of urothelial carcinoma from benign mimickers by TERT promoter mutation. Am J Surg Pathol. 2015 Jan;39(1):127-31.
Key words: urothelial carcinoma, TERT promoter, nested carcinoma


1. Asnaghi L, Alkatan H, Mahale A, Othman M, Alwadani S, Al-Hussain H, Jastaneiah S, Yu W, Maktabi A, Edward DP, Eberhart CG. Identification of multiple DNA copy number alterations including frequent 8p11.22 amplification in conjunctival squamous cell carcinoma. Invest Ophthalmol Vis Sci. 2014 Dec 9;55(12):8604-13.
Key words: Conjunctiva Squamous Cell carcinoma (cSCC), array CGH, NanoString assay
PMID: 25491297

2. Blue ME, Wilson M, Beaty CA, George TJ, Arnaoutakis GJ, Haggerty KA, Jones M, Brawn J, Manmohan S, Lange MS, Johnston MV, Baumgartner WA, Troncoso JC. Brain injury in canine models of cardiac surgery. J Neuropathol Exp Neurol. 2014 Dec;73(12):1134-43.

3. Chen I, Cummings V, Fogel JM, Marzinke MA, Clarke W, Connor MB, Griffith S, Buchbinder S, Shoptaw S, Del Rio C, Magnus M, Mannheimer S, Wheeler DP, Mayer KH, Koblin BA, Eshleman SH. Low-level Viremia early in HIV infection. J Acquir Immune Defic Syndr. 2014 Dec 1;67(4):405-8.
Key words: HIV, viral load, MSM

4. Cimino-Mathews A, Sharma R, Illei PB, Vang R, Argani P. A subset of malignant phyllodes tumors express p63 and p40: a diagnostic pitfall in breast core needle biopsies. Am J Surg Pathol. 2014 Dec;38(12):1689-96.
Key words: phyllodes tumors, p63, p40, sarcomatoid carcinoma, breast

5. Crane GM, Xian RR, Burns KH, Borowitz MJ, Duffield AS, Taube JM. Primary effusion lymphoma presenting as a cutaneous intravascular lymphoma. J Cutan Pathol. 2014 Dec;41(12):928-35.
Key words: Epstein-Barr virus (EBV), human herpesvirus type-8 (HHV-8), intravascular lymphoma, primary effusion lymphoma, skin biopsy

6. Katz LM, Tobian AAR. Ebola virus disease, transmission risk to laboratory personnel and pretransfusion testing. Transfusion. Dec 2014;54:3247-51.
Key words: Ebola virus, transmission, pretransfusion testing

7. Ma C, Giardiello FM, Montgomery EA. Upper tract juvenile polyps in juvenile polyposis patients: dysplasia and malignancy are associated with foveolar, intestinal, and pyloric differentiation. Am J Surg Pathol.2014 Dec;38(12):1618-26.
Key words: polyps, dysplasia, pylorus, upper GI tracts

8. Ma C, Limketkai BN, Montgomery EA. Recently highlighted non-neoplastic pathologic entities of the upper GI tract and their clinical significance. Gastrointest Endosc. 2014 Dec;80(6):960-9.
Key words: upper GI tract, pathology, non-neoplastic

9. Mahairaki V, Ryu J, Peters A, Chang Q, Li T, Park TS, Burridge PW, Talbot CC Jr, Asnaghi L, Martin LJ, Zambidis ET, Koliatsos VE. Induced pluripotent stem cells from familial Alzheimer's disease patients differentiate into mature neurons with amyloidogenic properties. Stem Cells Dev. 2014 Dec 15;23(24):2996-3010.
Key words: pluripotent stem cells, Alzheimer's disease, neurons, amyloidogenic

10. Mathur A, Najafian A, Schneider EB, Zeiger MA, Olson MT. Malignancy risk and reproducibility associated with atypia of undetermined significance on thyroid cytology. Surgery. 2014 Dec;156(6):1471-6.
Key words: malignancy, thyroid, cytology

11. So J, Gordetsky J, Epstein JI. Variant of prostatic adenocarcinoma with paneth cell-like neuroendocrine differentiation readily misdiagnosed as gleason pattern 5. Hum Pathol.2014 Dec;45:2388-93.
Key words: prostate adenocarcinoma, neuroendocrine differentiation in prostate cancer, gleason grade

12. Wang CC, Al-Hussain TO, Epstein JI. Rosai-Dorfman disease (RDD) of the testis and kidney: Analysis of 5 cases. Histopathology. 2014 Dec;65:908-16.
Key words: Rosai-dorfman disease, testis tumors

1. Faraj SF, Chaux A, Gonzalez-Roibon N, Munari E, Ellis C, Driscoll T, Schoenberg MP, Bivalacqua TJ, Shih IM, Netto GJ. ARID1A immunohistochemistry improves outcome prediction in invasive urothelial carcinoma of urinary bladder. Hum Pathol 2014 Nov;45(11):2233-9.
Key words: immunohistochemistry, outcome prediction, urothelial carcinoma, bladder

2. Kim A, Hartman IZ, Poore B, Boronina T, Cole RN, Song N, Ciudad MT, Caspi RR, Jaraquemada D, Sadegh-Nasseri S. Divergent paths for the selection of immunodominant epitopes from distinct antigenic sources. Nat Commun. 2014 Nov;5:5369.
Key words: epitopes, antigen, peptide

3. Kryvenko ON, Jorda M, Argani P, Epstein JI. Diagnostic approach to eosinophilic renal neoplasms. Arch Pathol Lab Med. 2014 Nov;138(11):1531-41.
Key words: oncocytoma, angiomyolipoma, chromophobe renal cell carcinoma
PMID: 25357116

4. Poling JS, Tsangaris TN, Argani P, Cimino-Mathews A. Frozen section evaluation of breast carcinoma sentinel lymph nodes: a retrospective review of 1,940 cases. Breast Cancer Res Treat. 2014 Nov;148(2):355-61.
Key words: breast carcinoma, sentinel lymph node, frozen section
PMID: 25318925

5. Sadakari Y, Kanda M, Maitani K, Borges M, Canto MI, Goggins M. Mutant KRAS and GNAS DNA concentrations in secretin-stimulated pancreatic fluid collected from the pancreatic duct and the duodenal lumen. Clin Transl Gastroenterol. 2014 Nov;5:e62.
Key words: pancreatic fluid, pancreatic duct, KRAS, GNAS

6. Salimnia H, Fairfax MR, Lephart P, Morgan M, Gilbreath JJ, Butler-Wu SM, Templeton KE, Hamilton FJ, Wu F, Buckner R, Fuller D, Davis TE, Abdelhamed AM, Jacobs MR, Miller A, Pfrommer B, Carroll KC. An international, prospective, multicenter evaluation of the combination of AdvanDx Staphylococcus QuickFISH BC with mecA XpressFISH for detection of methicillin-resistant Staphylococcus aureus isolates from positive blood cultures. J Clin Microbiol. 2014 Nov;52(11):3928-32.
Key words: Staphylococcus aureus, blood cultures, MRSA, QuickFISH, sepsis

7. Soong RS, Song L, Trieu J, Knoff J, He L, Tsai YC, Huh W, Chang YN, Cheng WF, Roden RB, Wu TC, Trimble CL, Hung CF. Toll-like receptor agonist imiquimod facilitates antigen-specific CD8+ T-cell accumulation in the genital tract leading to tumor control through IFN?. Clin Cancer Res. 2014 Nov 1;20(21):5456-67.
Key words: imiquimod, T-cell, tumor control, HPV vaccination

8. Suwantarat N, Roberts A, Prestridge J, Seeley R, Speser S, Harmon C, Zhang C, Henciak S, Stamper PD, Ross T, Carroll KC. Comparison of five chromogenic media for recovery of vancomycin-resistant enterococci from fecal samples. J Clin Microbiol. 2014 Nov;52:4039-42.
Key words: VRE, enterococci, chromogenic agar, vancomycin resistance, surveillance
PMID: 25143571

9. Tobian AA, Quinn TC. Prevention of syphilis: another positive benefit for male circumcision. Lancet Glob Health. 2014 Nov;2(11):e623-4.
Key words: syphilis, prevention, circumcision
PMID: 25442680

10. Vieth M, Riddell RH, Montgomery EA. High-grade dysplasia versus carcinoma: east is east and west is west, but does it need to be that way? Am J Surg Pathol. 2014 Nov;38(11):1453-6.
Key words: high-grade dysplasia, gastric carcinoma

11. Vizcaíno MA, Caccamo DV, Fox E, Rodriguez FJ. Pleomorphic xanthoastrocytoma: report of two cases with unconventional clinical presentations. Clin Neuropathol. 2014 Nov/Dec;33(6):380-7.
Key words: pleomorphic xanthoastrocytoma, neoplasm

12. Zhang M, Wah C, Epstein JI. Metastatic renal cell carcinoma to the urinary bladder: a report of 11 cases. Am J Surg Pathol. 2014 Nov;38(11):1516-21.
Key words: renal cell carcinoma, bladder, clear cell renal cell carcinoma

PMID: 25140895

1. Ali MA, Arnold CA, Singhi AD, Voltaggio L. Clues to uncommon and easily overlooked infectious diagnoses affecting the GI tract and distinction from their clinicopathologic mimics. Gastrointest Endosc. 2014 Oct;80(4):689-706.
Key words: infectious disease, GI tract, clinicopathology
PMID: 25070906

2. Carter J, Geddes S, Zhang Z, Zhang H, Askin F, Gabrielson E, Li QK. Correlation of p16 expression with p53, cyclin D1 as well as clinical outcomes in non-small cell lung carcinoma (NSCLC). J Am Soc of Cytology. 2014 Sept-Oct;3(5):S65.
Key words: p16, p53, cyclin D1, non-small cell lung carcinoma
no PMID available

3. Chen G, Mosier S, Gocke CD, Lin MT, Eshleman JR. Cytosine deamination is a major cause of baseline noise in next-generation sequencing. Mol Diagn Ther. 2014 Oct;18(5):587-93.
Key words: cytosine, deamination, sequencing
PMID: 25091469

4. Guan B, Wu RC, Zhu H, Blackshaw S, Shih IeM, Wang TL. Notch3 interactome analysis identified WWP2 as a negative regulator of notch3 signaling in ovarian cancer. PLoS Genet 2014 Oct;10(10):e1004751
Key words: Notch signaling, stem cell, ovarian cancer, proteomics
PMID: 25356737

5. Kohr MJ, Murphy E, Steenbergen C. Glyceraldehyde-3-phosphate dehydrogenase acts as a mitochondrial trans-s-nitrosylase in the heart. PLoS One. 2014 Oct 27;9(10):e111448.
Key words: glyceraldehyde-3 phosphate dehydrogenase, mitochondria, trans-s-nitrosylase

6. Matoso A, Chen S, Plaza JA, Osunkoya AO, Epstein JI. Symplastic leiomyomas of the scrotum: a comparative study to usual leiomyomas and leiomyosarcomas. Am J Surg Pathol. 2014 Oct;38(10):1410-7.
Key words: scrotum, leiomyoma, leomyomasarcoma

7. Partin AW, Van Neste L, Klein EA, Marks LS, Gee JR, Troyer DA, Rieger-Christ K, Jones JS, Magi-Galluzzi C3, Mangold LA, Trock BJ, Lance RS, Bigley JW, Van Criekinge W, Epstein JI. Clinical validation of an epigenetic assay to predict negative histopathological results in repeat prostate biopsies. J Urol 2014 Oct;192(4):1081-7.
Key words: prostate needle biopsy, methylation, epigenetic


8. Redd AD, Tobian AAR. The death of HIV long-term non-progression? Lancet HIV 2014 Oct;1:e8-e9.
Key words: HIV, progression
no PMID available

9. Sharma R, Gurda G, Geddes S, Gabrielson E, Askin F, Li QK. Validation of the novel triple marker (combination of TTF, napsin-A and p40) in the subclassification of non-small cell lung carcinomas (NSCLC) using fine needle aspiration (FNA) cytological materials. J Am Soc of Cytology. 2014 Sept-Oct;3(5):S83.
Key words: triple marker, non-small cell lung carcinomas
no PMID available

10. Zhang H, Geddes S, Askin F, Gabrielson E, Li QK. Validation of protein biomarkers in bronchoalveolar lavage (BAL) to improve the detection of lung cancers in patients with lung nodules. J Am Soc of Cytology. 2014 Sept-Oct;3(5):S83.
Key words: protein biomarkers, bronchoalveolar lavage, lung cancer

1. Bishop JA, Antonescu CR, Westra WH. SMARCB1 (INI-1)-deficient carcinomas of the sinonasal tract. Am J Surg Pathol. 2014 Sep;38(9):1282-9.
Key words: sinonasal tract, sinonasal undifferentiated carcinoma, SMARCB1, INI-1, SNF5, rhabdoid
PMID: 25007146

2. Bishop JA, Yonescu R, Batista D, Warnock GR, Westra WH. Glandular odontogenic cysts (GOCs) lack MAML2 rearrangements: a finding to discredit the putative nature of GOC as a precursor to central mucoepidermoid carcinoma. Head Neck Pathol. 2014 Sep;8(3):287-90.
Key words: Glandular odontogenic cyst, central mucoepidermoid carcinoma, MAML2

3. Bishop JA, Yonescu R, Batista D, Yemelyanova A, Ha PK, Westra WH. Mucoepidermoid carcinoma does not harbor transcriptionally active high risk human papillomavirus even in the absence of the MAML2 translocation. Head Neck Pathol. 2014 Sep;8(3):298-302.
Key words: mucoepidermoid carcinoma, human papillomavirus, MAML2

4. Debeljak M, Freed DN, Welch JA, Haley L, Beierl K, Iglehart BS, Pallavajjala A, Gocke CD, Leffell MS, Lin MT, Pevsner J, Wheelan SJ, Eshleman JR. Haplotype counting by next-generation sequencing for ultrasensitive human DNA detection. J Molec Diagn. 2014 Sept;16(5):495-503.
Key words: haplotype , DNA, sequencing

5. Frank SM, Oleyar MJ, Ness PM, Tobian AA. Reducing unnecessary preoperative blood orders and costs by implementing an updated institution-specific maximum surgical blood order schedule and a remote electronic blood release system. Anesthesiology. 2014 Sep;121(3):501-9.
Key words: blood orders, blood release system, cost reduction
PMID: 24932853

6. Gordetsky, J, Bivalacqua T, Schoenberg M, Epstein JI. Ureteral and urethral frozen sections during radical cystectomy/cystoprostatectomy: an analysis of denudation and atypia. Urology. 2014 Sep;84(3):619-23.
Key words: ureter, urethra, urothelial carcinoma, transitional cell carcinoma, bladder cancer

7. Henderson LB, Applegate CD, Wohler E, Sheridan MB, Hoover-Fong J, Batista DA. The impact of chromosomal microarray on clinical management: a retrospective analysis. Genet Med. 2014 Sep;16(9):657-64.
Key words: chromosomal microarray, clinical management

8. Li Y, Ishiguro H, Kawahara T, Miyamoto Y, Izumi K, Miyamoto H. GATA3 in the urinary bladder: suppression of neoplastic transformation and down-regulation by androgens. Am J Cancer Res. 2014 Sep 6;4(5):461-73.
Key words: Androgen, bladder cancer, estrogen, GATA3, tumorigenesis

9. Rooper LM, Ali SZ, Olson MT. A minimum fluid volume of 75 mL is needed to ensure adequacy in a pleural effusion: A retrospective analysis of 2540 cases. Cancer Cytopathol. 2014 Sep;122(9):657-65.
Key words: pleural effusion, fluid volume

10. Suwantarat N, Carroll KC, Tekle T, Ross T, Maragakis LL, Cosgrove SE, Milstone AM. High prevalence of reduced chlorhexidine susceptibility in organisms causing central line associated blood stream infections. Infect Control Hosp Epidemiol. 2014 Sep;35(9):1183-6.
Key words: chlorhexidine, central line, blood stream infection

11. Westra WH. Detection of human papillomavirus (HPV) in clinical samples: evolving methods and strategies for the accurate determination of HPV status of head and neck carcinomas. Oral Oncol 2014 Sep;50(9):771-9.
Key words: head and neck squamous cell carcinoma, Cervista® HPV HR test, Hybrid Capture 2 (HC2) HPV DNA test, in situ hybridization, oropharyngeal carcinoma

12. Xing M, Liu R, Liu X, Murugan AK, Zhu G, Zeiger MA, Pai S, Bishop J. BRAF V600E and TERT promoter mutations cooperatively identify the most aggressive papillary thyroid cancer with highest recurrence. J Clin Oncol. 2014 Sep 1;32(25):2718-26.
Key words: thyroid cancer, recurrence, BRAF V600E, TERT, mutations

13. Yang S, Zhang H. Glycomic analysis of glycans released from glycoproteins using chemical immobilization and mass spectrometry. Curr Protoc Chem Biol. 2014 Sep 9;6(3):191-208.
Key words: GIG, MALDI, chemoenzymatic processes, glycan derivatization, protein immobilization

14. Yemelyanova A, Gown AM, Wu LS, Holmes BJ, Ronnett BM, Vang R. PAX8 expression in uterine adenocarcinomas and mesonephric proliferations. Int J Gynecol Pathol. 2014 Sep;33(5):492-9.


1. AlWadani S, Robinson S, Myers R, Akpek EK, Eberhart CG. No increase in IgG4-positive plasma cells in limbal Rosai-Dorfman disease. Cornea 2014 Aug;33(8):844-7.
Key words: IgG4, Rosai-Dorfman disease

2. Amin MB, Epstein JI Ulbright TM, Humphrey PA, Egevad L, Montironi R, Grignon D, Trpkov K, Lopez-Beltran A, Zhou M, Argani P, Delahunt B, Berney DM, Srigley JR, Tickoo SK, Reuter VE; Members of the ISUP Immunohistochemistry in Diagnostic Urologic Pathology Group. Best practices recommendations in the application of immunohistochemistry in urologic pathology: report from the International Society of Urological Pathology consensus conference. Am J Surg Pathol. 2014 Aug;38(8):1017-22.
Key words: immunohistochemistry; adenocarcinoma of the prostate, bladder carcinoma, testicular carcinoma, renal cell carcinoma

3. Asnaghi L, Lin MH, Lim KS, Lim KJ, Tripathy A, Wendeborn M, Merbs SL, Handa JT, Sodhi A, Bar EE, Eberhart CG. Hypoxia promotes uveal melanoma invasion through enhanced notch and MAPK activation. PlosOne. 2014 Aug28;9(8):e105372.
Key words: uveal melanoma, hypoxia, notch, MAPK, cellular invasion

4. Bezerra SM, Lotan TL, Faraj SF, Karram S, Sharma R, Schoenberg M, Bivalacqua TJ, Netto GJ. GATA3 expression in small cell carcinoma of bladder and prostate and its potential role in determining primary tumor origin. Hum Pathol. 2014 Aug;45(8):1682-7.
Key words: small cell carcinoma, bladder, prostate, tumor

5 Dudley JC, Gurda GT, Tseng LH, Anderson DA, Chen G, Taube JM, Gocke CD, Eshleman JR, Lin MT. Tumor cellularity as a quality assurance measure for accurate clinical detection of BRAF mutations in melanoma. Mol Diagn Ther. 2014 Aug;18(4):409-18.
Key words: quality assurance, BRAF mutation, melanoma

6. Epstein JI, Egevad L, Humphrey PA, Montironi R; Members of the ISUP Immunohistochemistry in Diagnostic Urologic Pathology Group. Best practices recommendations in the application of immunohistochemistry in the prostate: report from the International Society of Urologic Pathology consensus conference. Am J Surg Pathol. 2014 Aug;38(8):e6-e19.
Key words: prostate, immunohistochemistry, high molecular weight cytokeratin, adenocarcinoma of the prostate

7. Ishiguro H, Kawahara T, Zheng Y, Kashiwagi E, Li Y, Miyamoto H. Differential regulation of bladder cancer growth by various glucocorticoids: corticosterone and prednisone inhibit cell invasion without promoting cell proliferation or reducing cisplatin cytotoxicity. Cancer Chemother Pharmacol. 2014 Aug;74(2):249-55.
Key words: bladder cancer, chemotherapy, cisplatin, comedication, glucocorticoids

8. Ishiguro H, Kawahara T, Zheng Y, Netto GJ, Miyamoto H. Reduced glucocorticoid receptor expression predicts bladder tumor recurrence and progression. Am J Clin Pathol. 2014 Aug;142(2):157-64.
Key words: bladder cancer, glucocorticoid receptor, immunohistochemistry, progression, recurrence
PMID: 25015855

9. Kacker S, Ness PM, Savage WJ, Frick KD, Shirey RS, King KE, Tobian AA. Economic evaluation of a hypothetical screening assay for alloimmunization risk among transfused patients with sickle cell disease. Transfusion. 2014 Aug;54(8):2034-44.
Key words: economics, screening assay, alloimmunization, transfusion, sickle cell disease

10. Le A, Stine ZE, Nguyen C, Afzal J, Sun P, Hamaker M, Siegel NM, Gouw AM, Kang BH, Yu SH, Cochran RL, Sailor KA, Song H, Dang CV. Tumorigenicity of hypoxic respiring cancer cells revealed by a hypoxia-cell cycle dual reporter. Proc Natl Acad Sci U S A. 2014;111(34):12486-91.
Key words: anti-angiogenesis, metabolism, mitochondria, tumor microenvironment

11. Murphy E, Kohr M, Menazza S, Nguyen T, Evangelista A, Sun J, Steenbergen C. Signaling by S-nitrosylation in the heart. J Mol Cell Cardiol. 2014 Aug;73C:18-25.
Key words: cardioportection, nitric oxide, oxidation

12. Outschoorn IM, Talor MV, Burek CL, Hoffman WH, Rose NR. Heritability analysis of IgG4 antibodies in autoimmune thyroid disease. Autoimmunity 2014 Aug;47(5):320-6.
Key words: heritability, IgG4, antibodies, autoimmune, thyroid disease

13. Rodriguez FJ, Tihan T, Lin D, McDonald W, Nigro J, Feuerstein B, Jackson S, Cohen K, Burger PC. Clinicopathologic features of pediatric oligodendrogliomas. Am J Surg Pathol . 2014 Aug;38(8):1058-70.
Key words: clinicopathology, pediatrics, oligodendroglioma

14. Schütz C, Fleck M, Schneck JP, Oelke M. Killer artificial antigen presenting cells (KaAPC) for efficient in vitro depletion of human antigen-specific T cells. J Vis Exp. 2014 Aug 11;(90).
Key words: killer artificial antigen presenting cells, human antigen-specific T cells

15. Suwantarat N, Romagnoli M, Wakefield T, Carroll KC. Ventriculoperitoneal shunt infection caused by Bifidobacterium breve. Anaerobe. 2014 Aug;28:1-3.
Key words: shunt infections, Bifidobacterium, meningitis, anaerobes

1. Chin MS, Hooper LC, Hooks JJ, Detrick B. Identification of ?-fodrin as an autoantigen in experimental coronavirus retinopathy (ECOR). J Neuroimmunol. 2014 Jul 15;272(1-2):42-50.
Key words: alpha-fodrin, autoantigen, coronavirus retinopathy


2. Gordetsky J, Epstein JI. Pseudopapillary features in prostatic adenocarcinoma mimicking urothelial carcinoma: a diagnostic pitfall. Am J Surg Pathol. 2014 Jul;38(7):941-5.
Key words: prostatic adenocarcinoma, urothelial carcinoma
PMID: 24503758

3. Guan B, Suryo Rahmanto Y, Wu RC, Wang Y, Wang Z, Wang TL, Shih IeM. Roles of deletion of arid1a, a tumor suppressor, in mouse ovarian tumorigenesis. J Natl Cancer Inst. 2014 July;106(7).
Key words: arid1a, tumor suppression, ovarian tumor

4. Kurman RJ, Shih IeM. Discovery of a cell: reflections on the checkered history of intermediate trophoblast and update on its nature and pathologic manifestations. Int J Gynecol Pathol. 2014 Jul;33(4):339-47.
Key words: trophoblast, pathology

5. Liu CM, Osborne BJ, Hungate BA, Shahabi K, Huibner S, Lester R, Dwan MG, Kovacs C, Contente-Cuomo TL, Benko E, Aziz M, Price LB, Kaul R. The semen microbiome and its relationship with local immunology and viral load in HIV infection. PLoS Pathog 2014 Jul 24;10(7):e1004262.
Key words: microbiome, immunology, HIV infection

6. Matoso A, Ross HM, Chen S, Allbritton J, Epstein JI. Squamous neoplasia of the scrotum: a series of 29 cases. Am J Surg Pathol. 2014 Jul;38(7):973-81.
Key words: neoplasia, scrotum, case review

7. Pagano MB, Murinson BB, Tobian AAR, King KE. Efficacy of therapeutic plasma exchange for treatment of stiff-person syndrome. Transfusion. 2014 July;54(7):1851-6.
Key words: plasma exchange, stiff-person syndrome

8. Suwantarat N, Lee R, Carroll KC, Zhang SX. Questionable utility of galactomannan testing for diagnosis of Exserohilum rostratum infection. J Clin Microbiol. 2014 Jul;52(7):2742-3.
Key words: galactomannan, Exserohilum rostratum, fungal diagnosis, fungal meningitis outbreak
PMID: 24970643

9. Tian W, Latour M, Epstein JI. Endometrial stromal sarcoma involving the urinary bladder: a study of 6 cases. Am J Surg Pathol. 2014 Jul;38(7):982-9.
Key words: endometrial stroma sarcoma, urinary bladder

PMID: 24705317

10. Tseng LH, Tang JL, Haley L, Beierl K, Gocke CD, Eshleman JR, Lin MT. Microsatellite instability confounds engraftment analysis of hematopoietic stem-cell transplantation. Appl Immunohistochem Mol Morphol. 2014 Jul;22(6):416-20.
Key words: short tandem-repeat, microsatellite instability, allogeneic hematopoietic stem-cell transplantation, chimerism, leukemia relapse


1. Ahsan S, Raabe EH, Haffner MC, Vaghasia A, Warren KE, Quezado M, Ballester LY, Nazarian J, Eberhart CG, Rodriguez FJ. Increased 5-hydroxymethylcytosine and decreased 5-methylcytosine are indicators of global epigenetic dysregulation in diffuse intrinsic pontine glioma. Acta Neuropathol Commun. 2014 Jun 3;2(1):59.
Key words: hydroxymethylcytosine, glioma
PMID: 24894482

2. Cousins MM, Konikoff J, Sabin D, Khaki L, Longosz AF, Laeyendecker O, Celum C, Buchbinder SP, Seage GR III, Kirk GD, Moore RD, Mehta SH, Margolick JB, Brown J, Mayer KH, Wheeler D, Justman JE, Hodder SL, Quinn TC, Brookmeyer R, Eshleman SH. A comparison of two measures of HIV diversity in multi-assay algorithms for HIV incidence estimation. PLoS One. 2014 Jun 26;9(6):e101043.
Key words: HIV, diversity, incidence, high resolution melting

3. Ellis CL, Eble JN, Subhawong AP, Martignoni G, Zhong M, Ladanyi M, Epstein JI, Netto GJ, Argani P.
Clinical heterogeneity of Xp11 translocation renal cell carcinoma: impact of fusion subtype, age, and stage. Mod Pathol. 2014 Jun;27(6):875-86.
Key words: renal, carcinoma, translocation, TFE3

4. Epstein JI, Amin MB, Beltran H, Lotan TL, Mosquera JM, Reuter VE, Robinson BD, Troncoso P, Rubin MA. Proposed morphologic classification of prostate cancer with neuroendocrine differentiation. Am J Surg Pathol. 2014 Jun;38(6):756-67.
Key words: small cell carcinoma, prostate adenocarcinoma, carcinoid tumor, large cell neuroendocrine carcinoma

5. Grabowski MK, Gray RH, Serwadda D, Kigozi G, Gravitt PE, Nalugoda F, Reynolds SJ, Wawer MJ, Watya S, Quinn TC, Tobian AAR. High risk human papillomavirus viral load and persistence among HIV-negative and HIV-positive men. Sex Transm Infect. 2014 Jun;90(4):337-43.
Key words: HIV, papillomavirus

6. Lin MT, Mosier SL, Thiess M, Beierl KF, Debeljak M, Tseng LH, Chen G, Yegnasubramanian S, Ho H, Cope L, Wheelan SJ, Gocke CD, Eshleman JR. Clinical validation of KRAS, BRAF and EGFR mutation detection using next generation sequencing. Am J Clin Pathol. 2014 June;141(6):856-66.
Key words: deamination, KRAS, BRAF, EGFR, mutation, next-generation sequencing, read depth, validation

7. Maniar KP, Wang Y, Visvanathan K, Shih IM, Kurman RJ. Evaluation of microinvasion and lymph node involvement in ovarian serous borderline/atypical proliferative serous tumors: a morphologic and immunohistochemical analysis of 37 cases. Am J Surg Pathol. 2014 Jun;38(6):743-55.
Key words: microinvasion, lymph node, ovarian tumor, immunohistochemical analysis

8. Marzinke MA, Breaud A, Parsons TL, Cohen MS, Piwowar-Manning E, Eshleman SH, Clarke W. The development and validation of a method using high-resolution mass spectrometry (HRMS) for the qualitative detection of antiretroviral agents in human blood. Clin Chim Acta 2014 Jun 10;433:157-68.
Key words: Antiretroviral; Clinical trials; Exactive-MS; High-resolution mass spectrometry; Validation

9. Munari E, Marchionni L, Chitre A, Hayashi M, Martignoni G, Brunelli M, Gobbo S, Argani P, Allaf M, Hoque MO, Netto GJ. Clear cell papillary renal cell carcinoma: micro-RNA expression profiling and comparison with clear cell renal cell carcinoma and papillary renal cell carcinoma. Hum Pathol .2014
Key words: Clear cell papillary renal cell carcinoma; Micro-RNA; Profiling; Renal cancer
PMID: 24703100

10. Riedel S, Neoh KM, Eisinger SW, Dam LM, Tekle T, Carroll KC. Comparison of commercial antimicrobial susceptibility test methods for testing of Staphylococcus aureus and Enterococci against vancomycin, daptomycin, and linezolid. J Clin Microbiol. 2014 June;52(6):2216-22.
Key words: Staphylococcus aureus, enterococci, susceptibility testing, linezolid, daptomycin.

11. Savage WJ, Hamilton R, Tobian AAR, Milne G, Kaufman RM, Savage JH, Borge D, Ness PM. Defining risk factors and presentation of allergic reactions to platelet transfusion. J Allergy Clin Immunol. 2014 Jun;133(6):1772-5.e9.
Key words: risk factors, allergic reactions, platelet transfusion

12. Schroeder LF, Amukele T. Medical laboratories in sub-Saharan Africa that meet international quality standards. Am J Clin Pathol . 2014 Jun;141(6):791-5.
Key words: Accreditation, Africa, quality, laboratory, global health

13. Tilson MP, Bishop JA. Utility of p40 in the differential diagnosis of small round blue cell tumors of the sinonasal tract. Head Neck Pathol .2014 Jun;8(2):141-5.
Key words: sinonasal tract, tumors, p40, differential diagnosis

14. Tobian AAR, Fuller AK, Uglik K, Tisch DJ, Borge PD, Benjamin RJ, Ness PM, King KE. The impact of platelet additive solution apheresis platelets on allergic transfusion reactions and corrected count increment. Transfusion. 2014 Jun;54(6):1523-9.
Key words: platelet, apheresis, transfusions

15. Voltaggio L, Montgomery E. Gastric mesenchymal lesions other than gastrointestinal stromal tumor. Diagn Histopathol. 2014 June;20(6):228-38.
Key words: gastric schwannoma, gastrointestinal stromal tumor, sarcoma mesenteric fibromatosis
no PMID avaialble

1. Ao MH, Zhang H, Sakowski L, Sharma R, Illei PB, Gabrielson E, Askin F, Li QK. The utility of a novel triple marker (combination of TTF1, napsin A, and p40) in the subclassification of non-small cell lung cancer. Hum Pathol. 2014 May;45(5):926-34.
Key words: Immunohistochemical markers; Napsin A; Non-small cell lung carcinoma (NSCLC); Novel triple stain marker; P40
PMID: 24746197

2. Berman DM, Epstein JI. When is prostate cancer really cancer? Urol Clinic N Amer. 2014 May;41:339-46.
Key words: gleason, prostate cancer
PMID: 24725494

3. Borowitz MJ. Mixed phenotype acute leukemia. Cytometry B Clin Cytom. 2014 May;86(3):152-3.
Key words: phenotype, acute leukemia
PMID: 24474569

4. Chaux A, Munari E, Cubilla AL, Hicks J, Lecksell K, Burnett AL, Netto GJ. Immunohistochemical expression of the mammalian target of rapamycin pathway in penile squamous cell carcinomas: a tissue microarray study of 112 cases. Histopathology. 2014 May;64(6):863-71.
Key words: PTEN; human papillomavirus; mTOR; mammalian target of rapamycin; penile cancer; squamous cell carcinoma

5. Coates TJ, Kulich M, Zelaya CE, Celantano DD, Chariyalertsak S, Chingono A, Gray G, Mbwambo JKK, Morin FS, Richter L, Sweat M, van Rooven H, McGrath N, Fiamma A, Laeyendecker O, Piwowar-Manning E, Szerekes G, Donnell D, Eshleman SH. Effect of community-based voluntary counselling and testing on HIV incidence and social and behavioural outcomes (NIMH Project Accept; HPTN 043): a cluster-randomised trial. Lancet Global Health. 2014 May;2:e267-e277.
Key words: HIV, prevention, randomized trial, Project Accept, HPTN
No PMID available

6. Cox R, Vang R, Epstein JI. Papillary cystadenoma of the epididymis and broad ligament: Morphological and immunohistochemical overlap with clear cell papillary renal cell carcinoma. Am J Surg Pathol .2014 May;38:713-8.
Key words: Papillary cystadenoma, clear cell renal cell carcinoma, CAIX, Cytokeratin 7

7. Gurda GT, Zhu Q, Bai H, Pan D, Schwarz KB, Anders RA. The use of Yes-associated protein expression in the diagnosis of persistent neonatal cholestatic liver disease. Hum Pathol. 2014 May;45(5):1057-64.
Key words: Bile duct obstruction; Bile ductular reaction; Biliary atresia; Hippo pathway; Neonatal cholestasis; Neurofibromatosis 2 (NF2); Verteporfin (VP); Yes-associated protein (YAP)
PMID: 24746211

8. Olson MT, Harrington C, Beierl K, Chen G, Thiess M, O'Neill A, Taube J, Zeiger MA, Lin MT, Eshleman JR. BRAF pyrosequencing analysis aided by a lookup table. Am J Clin Pathol. 2014 May;141:639-47.
Key words: BRAF mutations; Bioinformatics; Pyromaker; Pyrosequencing; Pyrosequencing analysis
PMID: 24713734

9. Olson MT, Novak A, Trotter J, Sterling F, Kelly D, Sachs S, Cornish TC, Boonyaarunnate T, Toll A, Tatsas AD, Maleki Z, Erozan YS, Rosenthal DL. Reproducibility of The Johns Hopkins Hospital Template for Urologic Cytology Samples. J Am Soc Cytopathol. 2014 May-June;3(3):156-64.
Key words: Non-gynecologic cytopathology, Paris system for reporting urinary cytopathology, inter-observer reproducibility, informatics
No PMID available

10. Rodi N, Sharma R, Sharma R, Zampella J, Dai L, Taylor MS, Hruban RH, Iacobuzio-Donahue CA, Maitra A, Torbenson MS, Goggins M, Shih IM, Duffield AS, Montgomery EA, Gabrielson E, Netto GJ, Lotan TL, De Marzo AM, Westra W, Binder ZA, Orr BA, Gallia GL, Eberhart CG, Boeke JD, Harris CR, Burns KH. Long interspersed element-1 protein expression is a hallmark of many human cancers. Am J Pathol. 2014 May;184(5):1280-6.
Key words: tumor marker, mobile DNA, transposon, retrotransposition, LINE-1

11. Sartori DA, Chan DW. Biomarkers in prostate cancer: what's new? Curr Opin Oncol. 2014 May;26(3):259-64.
Key words: aggressiveness, biomarkers, genomics, prostate cancer, proteomics

12. Smith NE, Illei PB, Allaf M, Gonzalez N, Morris K, Hicks J, Demarzo A, Reuter VE, Amin MB, Epstein JI, Netto GJ, Argani P. t(6;11) renal cell carcinoma (RCC): expanded immunohistochemical profile emphasizing novel RCC markers and report of 10 new genetically confirmed cases. Am J Surg Pathol. 2014 May;38(5):604-14.
Key words: Renal Cell Carcinoma; Translocation; TFEB

1. Emory JF, Seserko LA, Marzinke MA. Development and bioanalytical validation of a liquid chromatographic-tandem mass spectrometric (LC-MS/MS) method for the quantification of the CCR5 antagonist maraviroc in human plasma. Clin Chim Acta. 2014 Apr 20;431:198-205.
Key words: Assay validation; CCR5 antagonist; HIV; LC-MS/MS; Maraviroc
PMID: 24561264

2. Gurda GT, Vandenbussche CJ, Yonescu R, Gonzalez-Roibon N, Ellis CL, Batista DA, Netto GJ. Sacrococcygeal teratomas: clinico-pathological characteristics and isochromosome 12p status. Mod Pathol. 2014 Apr;27(4):562-8.
Key words: teratomas, isochromosome, sacrococcygeal
PMID: 24051698

3. Izumi K, Li Y, Ishiguro H, Zheng Y, Yao JL, Netto GJ, Miyamoto H. Expression of UDP-glucuronosyltransferase 1A in bladder cancer: association with prognosis and regulation by estrogen. Mol Carcinog. 2014 Apr;53(4):314-24.
Key words: 17?-estradiol; SVHUC cell line; immunohistochemistry; ovariectomy; urothelial neoplasm
PMID: 23143693

4. Karafin MS, Humphrey RL, Detrick B. Evaluation of monoclonal and oligoclonal gammopathies in a pediatric population in a major urban center. Am J Clin Pathol. 2014 Apr;141(4):482-7.
Key words: Pediatric, monoclonal, oligoclonal, gammopathy, monoclonal protein

5. Karram S, Kao CS, Osunkoya AO, Ulbright TM, Epstein JI. Idiopathic granulomatous orchitis: morphology and evaluation of its relationship to IgG4 related disease. Hum Pathol 2014 Apr;45(4):844-50.
Key words: orchitis, granulomas, igG4 related diseases
PMID: 24656095

6. Kim H, Saka B, Knight S, Borges M, Childs E, Klein AP, Wolfgang CL, Herman JM, Adsay V, Hruban RH, Goggins M. Having pancreatic cancer with tumoral loss of ATM and normal TP53 protein expression is associated with a poorer prognosis. Clin Cancer Res. 2014 Apr 1;20(7):1865-72.
Key words: pancreatic cancer, ATM, TP53, protein expression

7. Kryvenko ON, Carter HB, Trock BJ, Epstein JI. Biopsy criteria for determining appropriateness for active surveillance in the modern era. Urology. 2014 Apr;83(4):869-74.
Key words: prostate carcinoma, needle biopsy, Gleason grade, African Americans

8. Li Y, Ishiguro H, Kawahara T, Kashiwagi E, Izumi K, Miyamoto H. Loss of GATA3 in bladder cancer promotes cell migration and invasion. Cancer Biol Ther. 2014 Apr 1;15(4):428-35.
Key words: GATA3; bladder cancer; cell invasion; cell migration; cell proliferation
PMID: 24448324

9. Nagineni CN, Raju R, Nagineni KK, Kommineni VK, Cherukuri A, Kutty RK, Hooks JJ, Detrick B. Resveratrol suppresses expression of VEGF by human retinal pigment epithelial cells: potential nutraceutical for age-related macular degeneration. Aging Dis. 2014 Apr 1;5(2):88-100.
Key words: Age related macular degeneration, retina, VEGF, RPE cells, cytokines


10. Poling JS, Ma XJ, Bui S, Luo Y, Koch WM, Westra WH. Human papillomavirus (HPV) status of non-tobacco related squamous cell carcinomas of the lateral tongue. Oral Oncol. 2014 Apr;50(4):306-10.
Key words: head and neck cancer, oral cancer, p16, RNA in situ hybridization, smoking

11. Riedel S. The value of postmortem microbiology cultures. J Clin Microbiol 2014 Apr;52(4):1028-33.
Key words: microbiology, cultures, postmortem examination
PMID: 24403308

12. Schieffer KM, Tan KE, Stamper PD, Somogyi A, Andrea SB, Wakefield T, Romagnoli M, Chapin KC, Wolk DM, Carroll KC. Multicenter evaluation of the Sepsityper™ extraction kit and MALDI-TOF MS for direct identification of positive blood culture isolates using the BD BACTEC™ FX and VersaTREK(®) diagnostic blood culture systems. J Appl Microbiol. 2014 Apr;116(4):934-41.
Key words: MALDI-TOF MS; Sepsityper; bacteraemia; blood cultures; sepsis

13. Suwantarat N, Watkins T, Lee R, Carroll KC, Zhang SX. False positive reaction of L-canavanine glycine bromothymol blue medium with candida famata. J Clin Microbiol. 2014 Apr;52(4):1308-9. (letter)
Key words: false positive, L-canavanine glycine bromothymol blue, candida famata

14. Vandenbussche CJ, Ho CY, Nugent SL, Ali SZ. Extraneural metastases of primary central nervous system tumors identified by fine needle aspiration: a retrospective analysis. Acta Cytol. 2014 Mar-Apr;58(2):117-24.
Key words: fine needle aspiration, central nervous system tumor, extraneural metastases

15. Yano T, Ferlito M, Aponte A, Kuno A, Miura T, Murphy E, Steenbergen C. Pivotal role of mTORC2 and involvement of ribosomal protein S6 in cardioprotective signaling. Circ Res. 2014 Apr 11;114(8):1268-80.
Key words: insulin, ischemia-reperfusion injury, ischemic preconditioning, mTORC2, rapamycin
PMID: 24557881

1. Crane GM, Ambinder RF, Shirley CM, Fishman EK, Kasamon YL, Taube JM, Borowitz MJ, Duffield AS. HHV-8-positive and EBV-positive intravascular lymphoma: an unusual presentation of extracavitary primary effusion lymphoma. Am J Surg Pathol. 2014 Mar;38(3):426-32.
Key words: lymphoma, primary effusion

PMID: 24525514

2. Ding D, Lim KS, Eberhart CG. Arsenic trioxide inhibits Hedgehog, Notch and stem cell properties in glioblastoma neurospheres. Acta Neuropathol Commun. 2014 Mar 31;2(1):31.
Key words: arsenic trioxide, hedgehog, glioblastoma

3. Fowler MG, Coovadia H, Herron CM, Maldonado Y, Chipato T, Moodley D, Musoke P, Aizire J, Manji K, Stranix-Chibanda L, Fawzi W, Chetty V, Msweli L, Kisenge R, Brown E, Mwatha A, Eshleman SH, Richardson P, Allen M, George K, Andrew P, Zwerski S, Mofenson LM, Jackson JB; for the HPTN 046 Protocol Team. Efficacy and safety of an extended nevirapine regimen in infants of breastfeeding mothers with HIV-1 infection for prevention of HIV-1 transmission (HPTN 046): 18-month results of a randomized, double-blind, placebo-controlled trial. J Acquir Immune Defic Syndr. 2014 Mar 1;65(3):366-74.
Key words: HIV, breastfeeding, nevirapine

4. Gurda GT, Baras AS, Kurman RJ. Ki-67 index as an ancillary tool in the differential diagnosis of proliferative endometrial lesions with secretory change. Int J Gynecol Pathol. 2014 Mar;33(2):114-9.
Key words: endometrial lesion, differential diagnosis
PMID: 24487464

5. Jiao Y, Yonescu R, Offerhaus GJ, Klimstra DS, Maitra A, Eshleman JR, Herman JG, Poh W, Pelosof L, Wolfgang CL, Vogelstein B, Kinzler KW, Hruban RH, Papadopoulos N, Wood LD. Whole-exome sequencing of pancreatic neoplasms with acinar differentiation. J Pathol. 2014 Mar;232(4):428-35.
Key words: pancreatic neoplasm, exome
PMID: 24293293

6. Matthaei H, Wu J, Dal Molin M, Shi C, Perner S, Kristiansen G, Lingohr P, Kalff JC, Wolfgang CL, Kinzler KW, Vogelstein B, Maitra A, Hruban RH. GNAS Sequencing Identifies IPMN-specific Mutations in a Subgroup of Diminutive Pancreatic Cysts Referred to as "Incipient IPMNs". Am J Surg Pathol. 2014 Mar;38(3):360-3.
PMID: 24525507

7. Ning Y, Slovak ML, Schultz RA, Gojo I, Baer MR. Cryptic chromosome abnormalities in a patient with mixed phenotype acute leukemia. Leuk Lymphoma. 2014 Mar;55(3):680-2.
Key words: leukemia, chromosome abnormalities
PMID: 23725388

8. Olson MT, Novak A, Boonyaarunnate T, Shahid H, Kirby J, Ali SZ. Cytotechnologist attended on-site evaluation of adequacy for bone and soft tissue fine needle aspiration. J Am Soc Cytopathol 2014 Mar; 3(2):60-6.
Key words: fine needle aspiration, cytotechnologist
No PMID available

9. Perica K, Tu A, Richter A, Bieler JG, Edidin M, Schneck JP. Magnetic field-induced T cell receptor clustering by nanoparticles enhances T cell activation and stimulates antitumor activity. ACS Nano.2014 Mar 25;8(3):2252-60.
Key words: nanoparticles, T cell receptor (TCR), magnetic field, nano-aAPC

10. Matthaei H, Wu J, dal Molin M, Shi C, Perner S, Kristiansen G, Lingohr P, Kalff JC, Wolfgang CL, Kinzler KW, Vogelstein B, Maitra A, Hruban RH. GNAS sequencing identifies IPMN-specific mutations in a subgroup of diminutive pancreatic cysts referred to as "Incipient IPMNs." Am J Surg Pathol. 2014 Mar;38(3):360-3.
Key words: incipient IPMN, intraductal papillary mucinous neoplasm, GNAS mutation, pancreatic cyst
PMID: 24525507

11. Moore R, Blankson JN, Eshleman SH. Failure to identify HIV-infected individuals in a clinical trial using a single HIV rapid test for screening. HIV Clin Trials. 2014 Mar;15(2):62-8.
Key words: HIV, diagnosis, rapid test, viral suppression

12. Rajan Kd A, Burris C, Iliff N, Grant M, Eshleman JR, Eberhart CG.DNA mismatch repair defects and microsatellite instability status in periocular sebaceous carcinoma. Am J Ophthalmol. 2014 Mar;157(3):640-7.e1-2.
Key words: periocular sebaceous carcinoma, microsatellite
PMID: 24321472

13. Tilson MP, Gallia GL, Bishop JA. Among sinonasal tumors, CDX-2 immunoexpression is not restricted to intestinal-type adenocarcinomas. Head Neck Pathol. 2014 Mar;8(1):59-65.
Key words: sinonasal tumor, CDX-2, immunoexpression, adenocarcinoma

14. Tobian AA, Gaydos C, Gray RH, Kigozi G, Serwadda D, Quinn N, Grabowski MK, Musoke R, Ndyanabo A, Nalugoda F, Wawer MJ, Quinn TC. Male circumcision and Mycoplasma genitalium infection in female partners: a randomised trial in Rakai, Uganda. Sex Transm Infect .2014 Mar;90(2):150-4.
Key words: circumcision, Uganda, mycoplasma infection

15. Wood LD, Salaria SN, Cruise MW, Giardiello FM, Montgomery EA. Upper GI tract lesions in familial adenomatous polyposis (FAP): enrichment of pyloric gland adenomas and other gastric and duodenal neoplasms. Am J Surg Pathol. 2014 Mar;38(3):389-93.
Key words: GI tract, lesions, familial adenomatous polyposis

1. Bagnasco SM, Zachary AA, Racusen LC, Arend LJ, Carter-Monroe N, Alachkar N, Nazarian SM, Lonze BE, Montgomery RA, Kraus ES. Time course of pathologic changes in kidney allografts of positive crossmatch HLA-incompatible transplant recipients. Transplantation 2014 Feb 27;97(4):440-5.
Key words: Kidney, transplant, rejection, glomerulopathy, antibody mediated rejection
PMID: 24531821

2. Banet N, Descipio C, Murphy KM, Beierl K, Adams E, Vang R, Ronnett BM. Characteristics of hydatidiform moles: analysis of a prospective series with p57 immunohistochemistry and molecular genotyping. Mod Pathol. 2014 Feb;27(2):238-54.
Key words: hydatidiform moles, immunohistochemistry, genotype
PMID: 23887308

3. Bishop JA, Montgomery EA, Westra WH. Use of p40 and p63 immunohistochemistry and human papillomavirus testing as ancillary tools for the recognition of head and neck sarcomatoid carcinoma and its distinction from benign and malignant mesenchymal processes. Am J Surg Pathol. 2014 Feb;38(2):257-64.
Key words: immunohistochemistry, sarcomatoid carcinoma, mesenchyma, human papillomavirus
PMID: 24418859

4. Chaux A, Cubilla AL, Haffner MC, Lecksell KL, Sharma R, Burnett AL, Netto GJ. Combining routine morphology, p16INK4a immunohistochemistry, and in situ hybridization for the detection of human papillomavirus infection in penile carcinomas: A tissue microarray study using classifier performance analyses. Urol Oncol. 2014 Feb;32(2):171-7.
Key words: immunohistochemistry, penile carcinoma, human papillomavirus
PMID: 23499169

5. Gonzalez-Roibon N, Faraj SF, Munari E, Bezerra SM, Albadine R, Sharma R, Argani P, Allaf ME, Netto GJ. Comprehensive profile of GATA binding protein 3 immunohistochemical expression in primary and metastatic renal neoplasms. Hum Pathol. 2014 Feb;45(2):244-8.
Key words: immunohistochemistry, GARA binding protein 3, renal neoplasm

6. Guan H, Gurda G, Lennon MA, Hruban RH, Erozan YS. Intraductal tubulopapillary neoplasm of the pancreas on fine needle aspiration: case report with differential diagnosis. Diagn Cytopathol. 2014 Feb;42(2):156-60.
Key words: ITPN, cytopathology, intraductal tubulopapillary neoplasm, pancreatic neoplasm
PMID: 22807417

7. Haider BA, Baras AS, McCall MN, Hertel JA, Cornish TC, Halushka MK. A critical evaluation of microRNA biomarkers in non-neoplastic disease. PLoS One. 2014 Feb 26;9(2):e89565.
Key words: miRNA, miR-16, biomarker, serum, plasma

8. Henemyre-Harris CL, Samols M, Wenick AS, Sokoll LJ. Glow stick or urine sample? Clin Chem. 2014 Feb;60(2):425-6.
Key words: urine sample, pathology

9. Kuhn E, Ayhan A, Shih IeM, Seidman JD, Kurman RJ. The pathogenesis of atypical proliferative Brenner tumor: an immunohistochemical and molecular genetic analysis. Mod Pathol. 2014 Feb;27(2):231-7.
Key words: atypical proliferative, Brenner tumor, CDKN2A, mutation, pathogenesis

10. Petrides AK, Clarke W, Marzinke MA. Application and utility of pharmacogenetics in the clinical laboratory. J Analyt Molecul Tech. 2014 Feb 1(1):15.
Key words: pharmacogenetics, Pgx, genotyping, polymorphism, SNP
no PMID available

11. Rodriguez E, Tellschow S, Steinberg DM, Montgomery E. Cytologic findings of gastric schwannoma: a case report. Diagn Cytopathol 2014 Feb;42(2):177-80.
Key words: cytology, gastric schwannoma
PMID: 24436245

12. Singer N, Aina-Mumuney A, Poling J, Burton EC. Fetal death resulting from an isolated congenital partial pericardial defect. Obstet Gynecol. 2014 Feb;123(2 Pt 2):443-6.
Key words: pericardial defect, fetal death

13. Ferlito M, Wang Q, Fulton WB, Colombani PM, Marchionni L, Fox-Talbot K, Paolocci N, Steenbergen C. H2S increases survival during sepsis: protective effect of CHOP inhibition. J Immunol. 2014 Feb 15;192(4):1806-14.
Key words: H2S, sepis

14. Tan HL, Sood A, Rahimi HA, Wang W, Gupta N, Hicks J, Mosier S, Gocke CD, Epstein JI, Netto GJ, Liu W, Isaacs WB, De Marzo AM, Lotan TL. Rb loss is characteristic of prostatic small cell neuroendocrine carcinoma. Clin Cancer Res. 2014 Feb 15;20(4):890-903.
Key words: retinoblastoma, prostatic small cell neuroendocrine carcinoma

15. Wu CY, Yang LH, Yang HY, Knoff J, Peng S, Lin YH, Wang C, Alvarez RD, Pai SI, Roden RB, Hung CF, Wu TC. Enhanced cancer radiotherapy through immunosuppressive stromal cell destruction in tumors. Clin Cancer Res. 2014 Feb 1;20(3):644-57.
Key words: radiotherapy, stromal cell destruction

1. Chiu YL, Shan L, Huang H, Haupt C, Bessell C, Canaday DH, Zhang H, Ho YC, Powell JD, Oelke M, Margolick JB, Blankson JN, Griffin DE, Schneck JP. Sprouty-2 regulates HIV-specific T cell polyfunctionality. J Clin Invest. 2014 Jan 2;124(1):198-208.
Key words: HIV, T cell
PMID: 24292711

2. Codispoti K, Mosier S, Ramsey R, Lin MT, Rodriguez FJ. Genetic and pathologic evolution of early secondary gliosarcoma. Brain Tumor Pathol. 2014 Jan;31(1):40-6.
Key words: gliosarcoma, pathology
PMID: 23324827

3. Cousins MM, Konikoff J, Laeyendecker O, Celum C, Buchbinder SP, Seage GR 3rd, Kirk GD, Moore RD, Mehta SH, Margolick JB, Brown J, Mayer KH, Koblin BA, Wheeler D, Justman JE, Hodder SL, Quinn TC, Brookmeyer R, Eshleman SH. HIV diversity as a biomarker for HIV incidence estimation: including a high resolution melting diversity assay in a multi-assay algorithm. J Clin Microbiol 2014 Jan;52(1):115-21.
Key words: HIV, diversity, incidence, high resolution melting, HRM
PMID: 24153134

4. Darshan M, Zheng Q, Fedor HL, Wyhs N, Yegnasubramanian S, Lee P, Melamed J, Netto GJ, Trock BJ, De Marzo AM, Sfanos KS. Biobanking of derivatives from radical retropubic and robot-assisted laparoscopic prostatectomy tissues as part of the prostate cancer biorepository network. Prostate. 2014 Jan;74(1):61-9.
Key words: biobanking, laparoscopic prostatectomy, prostate cancer

5. Dudas R, Vandenbussche CV, Baras A, Ali SZ, Olson MT. Inexpensive telecytology solutions that use the raspberry Pi and iPhone. J Am Soc Cytopathol. 2014 Jan;3:49-55.
Key words: telecytology, technology, iPhone
no PMID available

6. Ho CY, Troncoso JC, Knox D, Stark W, Eberhart CG. Beta-amyloid, phospho-tau and alpha-synuclein deposits similar to those in the brain are not identified in the eyes of Alzheimer's and Parkinson's disease patients. Brain Pathol 2014 Jan;24(1):25-32.
Key words: amyloid eye, lens, synuclein, tau
PMID: 23714377

7. Holmes BJ, Westra WH. The expanding role of cytopathology in the diagnosis of HPV-related squamous cell carcinoma of the head and neck. Diagn Cytopathol 2014 Jan;42(1):85-93.
Key words: branchial cleft cyst, cell block, cystic squamous cell carcinoma, fine needle aspiration (FNA), human papillomavirus
PMID: 23749770

8. Kacker S, Ness PM, Savage WJ, Frick KD, Shirey RS, King KE, Tobian AAR. Cost-effectiveness of prospective red blood cell antigen matching to prevent alloimmunization among sickle cell patients. Transfusion 2014 Jan;54(1):86-97.
Key words: red blood cell, alloimmunization, sickle cell anemia
PMID: 24571485

9. Lee SL, Illei PB, Han JS, Epstein JI. Florid mesothelial hyperplasia of the tunica vaginalis mimicking malignant mesothelioma: A clinicopathologic study of 12 cases. Am J Surg Pathol 2014 Jan;38(1):54-9.
Key words: mesothelioma, testis neoplasms, mesothelium, hydrocele
No PMID available

10. Marzinke MA, Clarke W, Wang L, Cummings V, Liu TY, Piwowar-Manning E, Breaud A, Griffith S, Buchbinder S, Shoptaw S, Del Rio C, Magnus M, Mannheimer S, Fields SD, Mayer KH, Wheeler DP, Koblin BA, Eshleman SH, Fogel JM. Nondisclosure of HIV status in a clinical trial setting: antiretroviral drug screening can help distinguish between newly diagnosed and previously diagnosed HIV infection. Clin Infect Dis. 2014 Jan;58(1):117-20.
Key words: HIV, antiretroviral drug screening
PMID: 24092804

11. Montgomery E, Voltaggio L. Mesenchymal polyps. Diagn Histopathol 2014 Jan;20(1):19-29.
Key words: mesenchymal polyps

No PMID available

12. Olson MT, Boonyaarunnate T, Aksoy Altinboga A, Ali SZ. 'Suspicious for a papillary thyroid carcinoma' before and after The Bethesda System for reporting thyroid cytopathology: Impact of standardized terminology. Acta Cytol 2014 Jan;58(1):15-22.
Key words: papillary thyroid carcinoma, Bethesda System
PMID: 24192286

13. Perica K, Medero ADL, Malarvizhi D, Chiu Y-L, Bieler JG, Niemöller M, Assenmacher M, Richter A, Edidin M, Oelke M, Schneck JP. Nanoscale artificial antigen presenting cells for T cell immunotherapy. Nanomedicine. 2014 Jan;10(1):119-29.
Key words: T cell immunotherapy, antigen, nanoscale
PMID: 23891987

14. Singhi AD, Arnold CA, Crowder CD, Lam-Himlin DM, Voltaggio L, Montgomery EA. Esophageal leukoplakia or epidermoid metaplasia: a clinicopathological study of 18 patients. Modern Pathol .2014 Jan;27:38-43.
Key words: esophagus, leukoplakia, metaplasia
PMID: 23765246

15. Sunshine JC, Perica K, Schneck JP, Green JJ. Particle shape dependence of CD8+ T cell activation by artificial antigen presenting cells. Biomaterials. 2014 Jan;35(1):269-77.
Key words: CD8, T cells, antigen presenting cells

PMID: 24099710

1. Carroll KC, Buchan BW, Tan S, Stamper PD, Riebe KM, Pancholi P, Kelly C, Rao A, Fader R, Cavagnolo R, Wilson W, Goering RV, Trevino EA, Weissfeld AS, Ledeboer NA. Multicenter evaluation of the Verigene Clostridium difficile nucleic acid test. J Clin Microbiol. 2013 Dec;51(12):4120-5.
Key words: Clostridium difficile, Verigene, toxin A, toxin B, nucleic acid amplification
PMID: 24088862

2. Chaux A, Han JS, Lee S, Gonzalez-Roibon N, Sharma R, Burnett AL, Cubilla AL, Netto GJ. Immunohistochemical profile of the penile urethra and differential expression of GATA3 in urothelial versus squamous cell carcinomas of the penile urethra. Hum Pathol. 2013 Dec;44(12):2760-7.
Key words: penile urethra, GATA3, squamous cell carcinoma

3. Ellis CL, Partin AW, Han M, Epstein JI. Adenocarcinoma of the prostate with Gleason score 9-10 on core biopsy: Correlation with findings at radical prostatectomy and prognosis. J Urol. 2013 Dec;190(6):2068-73.
Key words: prostate adenocarcinoma, Gleason grade

4. Gonzalez-Roibon N, Albadine R, Sharma R, Faraj SF, Illei PB, Argani P, Ertoy D, Allaf ME, Netto GJ. The role of GATA binding protein 3 in the differential diagnosis of collecting duct and upper tract urothelial carcinomas. Hum Pathol. 2013 Dec;44(12):2651-7.
Key words: Collecting duct carcinoma, GATA3, upper tract urothelial carcinoma

5. Hütt-Cabezas M, Karajannis MA, Zagzag D, Shah S, Horkayne-Szakaly I, Rushing EJ, Cameron JD, Jain D, Eberhart CG, Raabe EH, Rodriguez FJ. Activation of mTORC1/mTORC2 signaling in pediatric low-grade glioma and pilocytic astrocytoma reveals mTOR as a therapeutic target. Neuro Oncol. 2013 Dec;15(12):1604-14.
Key words: TORC1, glioma, pilocytic astrocytoma, mTOR

6. Jiao Y, Pawlik TM, Anders RA, Selaru FM, Streppel MM, Lucas DJ, Niknafs N, Guthrie VB, Maitra A, Argani P, Offerhaus GJA, Roa JC, Roberts LR, Gores GJ, Popescu I, Alexandrescu ST, Dima S, Fassan M, Simbolo M, Mafficini A, Capelli P, Lawlor RT, Ruzzenente A, Guglielmi A, TortoraG, de Braud F, Scarpa A, Jarnagin W, Klimstra D, Karchin R, Velculescu VE, Hruban RH, Vogelstein B, Kinzler KW, Papadopoulos N, Wood LD. Exome sequencing reveals frequent inactivating mutations in BAP1, ARID1A, and PBRM1 in intrahepatic cholangiocarcinomas. Nat Genet 2013 Dec;45(12):1470-3.
Key words: exome sequencing, mutations, intrahepatic cholangiocarcinomas

7. Kinde I, Munari E, Faraj SF, Hruban RH, Schoenberg M, Bivalacqua T, Allaf M, Springer S, Wang Y, Diaz LA Jr, Kinzler KW, Vogelstein B, Papadopoulos N, Netto GJ. TERT Promoter mutations occur early in urothelial neoplasia and are biomarkers of early disease and disease recurrence in urine. Cancer Res. 2013 Dec 15;73(24):7162-7.
Key words: urothelial neoplasia, disease recurrence, urine

8. Munari E, Fujita K, Faraj S, Chaux A, Gonzalez-Roibon N, Hicks J, Meeker A, Nonomura N, Netto GJ. Dysregulation of mammalian target of rapamycin pathway in upper tract urothelial carcinoma. Hum Pathol. 2013 Dec;44(12):2668-76.
Key words: rapamycin, urothelial carcinoma

9. Robertson S, Hyder O, Dodson R, Nayar SK, Poling J, Beierl K, Eshleman JR, Lin MT, Pawlik TM, Anders RA. The frequency of KRAS and BRAF mutations in intrahepatic cholangiocarcinomas and their correlation with clinical outcome. Hum Pathol. 2013 Dec;44(12):2768-73.
Key words: cholangiocarcinoma, clinical outcome, KRAS, BRAF

10. Salaria SN, Abu Alfa AK, Cruise MW, Wood LD, Montgomery EA. Lichenoid esophagitis: clinicopathologic overlap with established esophageal lichen planus. Am J Surg Pathol. 2013 Dec;37(12):1889-94.
Key words: lichenoid esophagitis; lichen planus, esophagus

11. Schwartz LE, Begum S, Westra WH, Bishop JA. GATA3 immunohistochemical expression in salivary gland neoplasms. Head Neck Pathol. 2013 Dec;7(4):311-5.
Key words: GATA3, immunohistochemistry, salivary gland, neoplasms

12. Sfanos KS, Isaacs WB, DeMarzo AM. Infections and inflammation in prostate cancer. Am J Clin and Exp Urol. 2013 Dec;1(1):3-11.
Key words: Infections, prostatitis, prostate cancer, inflammation, animal models
no PMID available

13. Venigalla S, Wu G, Miyamoto H. The impact of frozen section analysis during partial nephrectomy on surgical margin status and tumor recurrence: A clinicopathologic study of 433 cases. Clin Genitourin Cancer. 2013 Dec;11(4):527-36.
Key words: Intraoperative frozen section assessment, partial nephrectomy, renal cell carcinoma, surgical margin, tumor recurrence

14. Wood LD, Heaphy CM, Daniel HJ, Naini BV, Lassman CR, Arroyo MR, Kamel IR, Cosgrove D, Boitnott J, Meeker AK, Torbenson M. Chromophobe hepatocellular carcinoma with abrupt anaplasia: a proposal for a new subtype of hepatocellular carcinoma with unique morphologic and molecular features. Mod Pathol. 2013 Dec; 26(12):1586-93.
Key words: hepatocellular carcinoma, anaplasia, chromophobe

15. Zhang SX. Enhancing molecular approaches for diagnosis of fungal infections. Future Microbiol 2013 Dec;8:1599-611.
Key words: fungal infections, diagnosis, molecular assays, standardization, validation

1. Boonyaarunnate T, Olson MT, Ali SZ. Impact of flow cytometry in thyroid cytopathology. Acta Cytologica 2013 Nov;57(6):562-6.
Key words: flow cytometry, thyroid, cytopathology

2. Cimino-Mathews A, Hicks JL, Sharma R, Vang R, Illei PB, De Marzo A, Emens LA, Argani P. A subset of malignant phyllodes tumors harbors alterations in the Rb/p16 pathway. Hum Pathol. 2013 Nov;44(11):2494-500.
Key words: breast, phyllodes, p16, Rb

3. Ellis CL, Chang AG, Cimino-Mathews A, Argani P, Youssef RF, Kapur P, Montgomery EA, Epstein JI. GATA-3 immunohistochemistry in the differential diagnosis of adenocarcinoma of the urinary bladder. Am J Surg Pathol. 2013 Nov;37(11):1756-60.
Key words: gata3, urothelial carcinoma,bladder adenocarcinoma

4. Faraj SF, Albadine R, Chaux A, Gonzalez-Roibon N, Hicks J, Humphreys E, Partin A, Netto GJ. Activation of mammalian target of rapamycin signaling pathway markers in minute adenocarcinoma of the prostate. Urology. 2013 Nov;82(5):1083-9.

5. Fogel JM, Wang L, Parsons TL, Ou SS, Piwowar-Manning E, Chen Y, Mudhune VO, Hosseinipour MC, Kumwenda J, Hakim JG, Chariyalertsak S, Panchia R, Sanne I, Kumarasamy N, Grinsztejn B, Makhema J, Pilotto J, Santos BR, Mayer KH, McCauley M, Gamble T, Bumpus NN, Hendrix CW, Cohen MS, Eshleman SH. Undisclosed antiretroviral drug use in a multinational clinical trial (HIV Prevention Trials Network 052). J Infect Dis. 2013 Nov;208(10):1624-8.
Key words: HIV, antiretroviral, newly diagnosed, clinical trial, HIV prevention
PMID: 23908493

6. Guan B, Magomi T, Wang TL, Shih IeM. Establishing isogenic inducible cell lines using founder reporter lines and recombinase-mediated cassette exchange. Biotechniques 2013 Nov;55(5):233-42.
Key words: inducible system, gene expression

7. Kacker S, Ness PM, Savage WJ, Frick KD, McCullough J, King KE, Tobian AAR. Costs and effectiveness of platelet additive solution to prevent allergic transfusion reactions. Transfusion. 2013 Nov; 53:2609-18.
Key words: platelet additive solution, allergic transfusion reactions, transfusion
PMID: 23363552

8. Laeyendecker O, Kulich M, Donnell D, Komárek A, Omelka M, Mullis CE, Szekeres G, Piwowar-Manning E, Fiamma A, Gray RH, Lutalo T, Morrison C, Salata RA, Chipato T, Celum C, Kahle EM, Taha TE, Kumwenda NI, Abdool Karim, Q, Naranbhai V, Lingpappa J, Sweat MD, Coates T, Eshleman SH. Development of methods for cross-sectional incidence HIV estimation in a large community-randomized trial. PLoS One. 2013 Nov;8(11):e78818.
Key words: HIV, incidence, cross-sectional, clinical trial, HIV prevention

9. Lin J, Bigge J, Ulbright TM, Montgomery E. Anastomosing hemangioma of the liver and gastrointestinal tract: an unusual variant histologically mimicking angiosarcoma. Am J Surg Pathol. 2013 Nov;37(11):1761-5.

10. McCall CM, Shi C, Cornish TC, Klimstra DS, Tang LH, Basturk O, Mun LJ, Ellison TA, Wolfgang CL, Choti MA, Schulick RD, Edil BH, Hruban RH. Grading of well-differentiated pancreatic neuroendocrine tumors is improved by the inclusion of both Ki67 proliferative index and mitotic rate. Am J Surg Pathol.2013 Nov;37(11):1671-7.
Key words: pancreatic neuroendocrine tumor, pancreas, pancreatic cancer, islet cell tumor, Ki67, endocrine neoplasm

11. Nie X, Arend LJ. Pkd1 is required for male reproductive tract development. Mech Dev. 2013 Nov-Dec;130(11-12):567-76.
Key words: Polycystin-1, polycystic kidney disease, epididymis, efferent duct, infertility

12. Odia Y, Orr BA, Robert Bell W, Eberhart CG, Rodriguez FJ. cMYC expression in infiltrating gliomas: associations with IDH1 mutations, clinicopathologic features and outcome. J Neurooncol. 2013 Nov;115(2):249-59.

13. Olson MT, Novak A, Kirby J, Boonyaarunnate T, Ali SZ. Cytotechnologist-attended on-site evaluation of adequacy for metastatic disease involving bone and soft tissue. Acta Cytologica. 2013 Nov;57:550-6.

14. Seserko LA, Emory JF, Hendrix CW, Marzinke MA. The development and validation of an UHPLC-MS/MS method for the rapid quantification of the antiretroviral agent dapivirine in human plasma. Bioanalysis. 2013 Nov;5(22):2771-83.
Key words: HIV, Mass spectrometry, dapivirine, NNRTI

15. Yachida S, Iacobuzio-Donahue CA. Evolution and dynamics of pancreatic cancer progression. Oncogene. 2013 Nov 7;32(45):5253-60.

1. Bishop JA, Yonescu R, Batista D, Begum S, Eisele DW, Westra WH. Utility of mammaglobin immunohistochemistry as a proxy marker for the ETV6-NTRK3 translocation in the diagnosis of salivary mammary analogue secretory carcinoma. Hum Pathol. 2013 Oct;44(10):1982-8.
Key words: Acinic cell carcinoma, ETV6-NTRK3, mammaglobin, mammary analogue secretory carcinoma

2. Barin JG, Baldeviano GC, Talor MV, Wu L, Ong S, Fairweather D, Bedja D, Stickel NR, Fontes JA, Cardamone AB, Zheng D, Gabrielson KL, Rose NR, Ciháková D. Fatal eosinophilic myocarditis develops in the absence of IFN-? and IL-17A. J Immunol. 2013 Oct 15;191(8):4038-47.
Key words: eosinophilic myocarditis, interferon, interleukin

3. Chaux A, Albadine R, Schultz L, Hicks J, Carducci MA, Argani P, Allaf M, Netto GJ. Dysregulation of the mammalian target of rapamycin pathway in chromophobe renal cell carcinomas. Hum Pathol. 2013 Oct;44(10):2323-30.
Key words: Chromophobe renal cell carcinoma, mTOR, PTEN, AKT, S6

4. Cimino-Mathews A, Illei PB. Cytologic and histologic findings of iron pill-induced injury of the lower respiratory tract. Diagn Cytopathol. 2013 Oct;41(10):901-3.
Key words: breast carcinoma, metastasis, tumor infiltrating lymphocytes, Foxp3

5. Grab DJ, Nenortas E, Bakshi R, Nikolskaia OV, Friedman JE, Shapiro TA. Membrane active chelators as novel anti-African trypanosome and anti-malarial drugs. Parasitol Int. 2013 Oct;62(5):461-3.
Key words: DP-99, DP-460, plasmodium,trypanosoma brucei,membrane active chelator MAC

6. Heaphy CM, Yoon GS, Peskoe SB, Joshu CE, Lee TK, Giovannucci E, Mucci LA, Kenfield SA, Stampfer MJ, Hicks JL, De Marzo AM, Platz EA, Meeker AK. Prostate cancer cell telomere length variability and stromal cell telomere length as prognostic markers for metastasis and death. Cancer Discovery. 2013 Oct;3(10):1130-41.
Key words: Prostate cancer, prognostic biomarker, telomere, risk stratification, mortality

7. Le A, Dang CV. Studying Myc's role in metabolism regulation. Methods Mol Biol. 2013;1012:213-9.
Key words: oxygen consumption, glucose uptake, labeling cells with 13-C glucose or glutamine

8. Liu CM, Soldanova K, Nordstrom L, Dwan MG, Moss OL, Contente-Cuomo TL, Keim P, Price LB, Lane AP. Medical therapy reduces microbiota diversity and evenness in surgically recalcitrant chronic rhinosinusitis. Int Forum Allergy Rhinol. 2013 Oct;3(10):775-81.

9. Mao TL, Shih IM. The roles of ARID1A in gynecologic cancer. J Gynecol Oncol. 2013 Oct;24(4):376-81.
Key words: ovarian cancer, ARID1A, gynecologic cancer, chromatin remodeling

10. Martin LJ, Wong M. Aberrant regulation of DNA methylation in amyotrophic lateral sclerosis: a new target of disease mechanisms. Neurotherapeutics. 2013 Oct;10(4):722-33.

11. Morris BJ, Tobian AAR. Legal threat to infant male circumcision. JAMA Pediatr 2013 Oct;167:890-1.
Key words: infant male circumcision

12. Samols MA, Smith NE, Gerber JM, Vuica-Ross M, Gocke CD, Burns KH, Borowitz MJ, Cornish TC, Duffield AS. Software-automated counting of Ki-67 proliferation index correlates with pathologic grade and disease progression of follicular lymphomas. Am J Clin Pathol. 2013 Oct;140(4):579-87.

13. So JS, Epstein JI. GATA3 expression in paragangliomas: a pitfall potentially leading to misdiagnosis of urothelial carcinoma. Mod Pathol. 2013 Oct;26(10):1365-70.
Key words: bladder, paraganglioma

14. Srigley JR, Delahunt B, Eble JN, Egevad L, Epstein JI, Grignon D, Hes O, Moch H, Montironi R, Tickoo SK, Zhou M, Argani P; ISUP Renal Tumor Panel. The International Society of Urological Pathology (ISUP) Vancouver Classification of Renal Neoplasia. Am J Surg Pathol. 2013 Oct;37(10):1469-89
Key words: Renal, carcinoma, classification

15. Wood LD. Pancreatic cancer genomes: toward molecular subtyping and novel approaches to diagnosis and therapy. Mol Diagn Ther. 2013 Oct;17(5):287-97.

1. Bagby C, Ronnett BM, Yemelyanova A, Maleki Z, Kuhn E, Vang R. Clinically occult tubal and ovarian high-grade serous carcinomas presenting in uterine samples: diagnostic pitfalls and clues to improve recognition of tumor origin. Int J Gynecol Pathol. 2013 Sep;32(5):433-43.
Key words: Fallopian tube, ovary, high-grade serous carcinoma, serous tubal intraepithelial carcinoma, endometrial biopsy
PMID: 23896706

2. Davis MA, Gray RH, Grabowski MK, Serwadda D, Kigozi G, Gravitt PE, Nalugoda F, Watya S, Wawer MJ, Quinn TC, Tobian AA. Male circumcision decreases high-risk human papillomavirus viral load in female partners: a randomized trial in Rakai, Uganda. Int J Cancer. 2013 Sep 1;133(5):1247-52.
Key words: Human papillomavirus, male circumcision, Uganda, cervical cancer, sexually transmitted infections
PMID: 23400966

3. Eisinger SW, Schwartz M, Dam L, Riedel S. Evaluation of the BD Vacutainer Plus Urine C&S Preservative Tubes compared with nonpreservative urine samples stored at 4°C and room temperature. Am J Clin Pathol. 2013 Sep;140(3):306-13.
Key words: preservative tubes, vacutainer, urine samples
PMID: 23955448

4. Giannico GA, Ross HM, Lotan T, Epstein JI. Aberrant expression of p63 in adenocarcinoma of the prostate: A radical prostatectomy study. Am J Surg Pathol. 2013 Sep;37(9):1401-6.
Key words: p63, adenocarcinoma prostate
PMID: 23774168

5. Green WM, Hicks JL, De Marzo AD, Illei PB, Epstein JI. Immunohistochemical evaluation of TMPRSS2-ERG gene fusion in adenosis of the prostate. Hum Pathol. 2013 Sep;44(9):1895-901.
Key words: TMPRSS2-ERG gene fusion, adenosis, prostate
PMID: 23664537

6. Harrington CT, Lin EI, Olson MT, Eshleman JR. Fundamentals of pyrosequencing. Arch Pathol Lab Med. 2013 Sep;137(9):1296-303.
Key words: pyrosequencing
PMID: 23991743

7. Kacker S, Frick KD, Tobian AA. Constructing a model: economic evaluations in transfusion medicine, Part?3. Transfusion. 2013 Sep;53(9):1885-7.
Key words: economics, transfusion,transfusion medicine
PMID: 23560614

8. Kao CS, Epstein JI. Tubular adenoma of the urinary tract: a newly described entity. Hum Pathol. 2013 Sep;44(9):1890-4.
Key words : adenoma,urinary bladder
PMID: 23664485

9. Lin MT, Tseng LH, Beierl K, Thiess M, Chase N, Stafford A, Levis M, Eshleman JR, Gocke CD. Tandem duplication PCR: an ultra-sensitive assay for the detection of internal tandem duplications of the FLT3 gene. Diagn Mol Pathol. 2013 Sep;22(3):149-55.
Key words:PCR, assay, tandem duplications, FLT3 gene
PMID: 23846441

10. Mao TL, Ardighieri L, Ayhan A, Kuo KT, Wu CH, Wang TL, Shih IeM. Loss of ARID1A expression correlates with stages of tumor progression in uterine endometrioid carcinoma. Am J Surg Pathol. 2013 Sep;37(9):1342-8. PMID:24076775
Key words: ovarian cancer, ARID1A pathogenesis

PMID: 24076775

11. Riedel S, Carroll KC. Laboratory detection of sepsis: biomarkers and molecular approaches. Clin Lab Med. 2013 Sep;33(3):413-37.
Key words: sepsis, biomarkers, laboratory detection

PMID: 23931833

12. Singhi AD, Norwood S, Liu TC, Sharma R, Wolfgang CL, Schulick RD, Zeh HJ, Hruban RH. Acinar cell cystadenoma of the pancreas: a benign neoplasm or non-neoplastic ballooning of acinar and ductal epithelium? Am J Surg Pathol. 2013 Sep;37(0):1329-35.
Key words: acinar cell carcinoma, pancreas, development
PMID: 24076773

13. Tamma PD, Girdwood SC, Gopaul R, Tekle T, Roberts AA, Harris AD, Cosgrove SE, Carroll KC. The use of cefepime for treating AmpC B-lactamase-producing Enterobacteriaceae. Clin Infect Dis. 2013; 57:781-8.
Key words: Gram negative rods, cefepime, AmpC, Beta-lactamases, resistance
PMID: 23759352

14. Tobian AA, Grabowski MK, Serwadda D, Newell K, Ssebbowa P, Franco V, Nalugoda F, Wawer MJ, Gray RH, Quinn TC, Reynolds SJ; Rakai Health Sciences Program. Reactivation of herpes simplex virus type 2 after initiation of antiretroviral therapy. J Infect Dis. 2013 Sep 1;208(5):839-46.
Key words: herpes simplex virus type 2 (HSV-2), human immunodeficiency virus (HIV), immune reconstitution inflammatory syndrome (IRIS), acyclovir, reactivation
PMID: 23812240

15. Wolfgang CL, Herman JM, Laheru DA, Klein AP, Erdek MA, Fishman EK, Hruban RH. Recent progress in pancreatic cancer. CA Cancer J Clin. 2013 Sep;63(5):318-48.
Key words: pancreatic neoplasms, medical oncology, molecular biology, radiation oncology, radiology
PMID: 23856911

1. Belchis DA, Shekitka K, Gocke CD. Multi-institutional retrospective cohort study of spontaneous pneumothorax. Pathol Res Pract 2013 Aug;209(8):486-9.
Key words: Spontaneous pneumothorax, pneumothorax-associated fibroblastic lesion, multi-institutional cohort study
PMID: 23778154

2. Chang A, Brimo F, Montgomery EA, Epstein JI. Use of PAX8 and GATA3 in diagnosing
sarcomatoid renal cell carcinoma and sarcomatoid urothelial carcinoma. Hum Pathol. 2013 Aug;44(8):1563-8
Key words: pasx8, gata3, sarcomatoid renal cell carcinoma, sarcomatoid urothelial carcinoma

3. Gonzalez-Roibon N, Han JS, Lee S, Feng Z, Arslankoz S, Smith N, Pierorazio PM, Humphreys E, Deweese TL, Partin AW, Bivalacqua TJ, Han M, Trock B, Netto GJ. Comparison of biochemical recurrence free survival between periprostatic and pelvic lymph node metastases of prostate cancer. Int J Surg Pathol. 2013 Aug;21(4):352-7.

4. Green WM, Yonescu R, Morsberger L, Morris K, Netto GJ, Epstein JI, Illei PB, Allaf M, Ladanyi M, Griffin CA, Argani P. Utilization of a TFE3 break-apart FISH assay in a renal tumor consultation service. Am J Surg Pathol. 2013 Aug;37(8):1150-63.
Key words: Renal, carcinoma, translocaton, TFE3

5. Kacker S, Frick KD, Tobian AAR. Establishing a framework: economic evaluations in transfusion medicine part 2. Transfusion. 2013 Aug;53(8):1634-6.

6. Kakiuchi Y, Choy B, Gordetsky J, Izumi K, Wu G, Rashid H, Joseph JV, Miyamoto H. Role of frozen section analysis of surgical margins during robot-assisted laparoscopic radical prostatectomy: a 2,608-case experience. Hum Pathol. 2013 Aug;44(8):1556-62.
Key words: Gleason score, intraoperative frozen section analysis, laparoscopic radical prostatectomy, surgical margin, tumor stage

7. Lai H, Fishman EK, Gerstenblith G, Brinker B, Hong T, Chen S, Li J, Tong W, Detrick B, Lai S. Vitamin D deficiency is associated with coronary artery calcification in cardiovascularly asymptomatic African Americans with HIV infection. Vasc Health Risk Manag. 2013;9:493-500.

PMID: 24009422

8. LeBlanc RE, Meriden Z, Sutton DA, Thompson EH, Neofytos D, Zhang SX. Cunninghamella echinulata causing fatally invasive fungal sinusitis. Diagn Microbiol Infect Dis. 2013 Aug;76(4):506-9.
Key words: Fungal sinusitis, Cunninghamella echinulata, zygomycetes, mucorales, mucromycosis


9. Poluektov YO, Kim A, Hartman IZ, Sadegh-Nasseri S. HLA-DO as the optimizer of epitope selection for MHC class II antigen presentation. PLoS One. 2013 Aug 8;8(8):e71228.
Key words: Immune mechanisms, antigen processing and presentation, autoimmunity, epitope selection, HLA-DR

10. Poluektov YO, Kim A, Sadegh-Nasseri S. HLA-DO and its role in MHC class II antigen presentation. Front Immunol. 2013 Aug;4(article260):1-5.
Key words: HLA-DO, HLA-DR antigens, MHC class II antigen processing, models for HLA-DO function, HLA-DM

11. Ramirez L, Hamad AR. Status of autoimmune diabetes 20-year after generation of BDC2.5-TCR transgenic non-obese diabetic mouse. World J Diabetes. 2013 Aug 15;4(4):88-91.
Key words: diabetes, transgenic mouse, autoimmune diabetes

12. Tilson MP, Jones RJ, Sexauer A, Griffin CA, Morsberger LA, Batista DA, Small D, Burns KH, Gocke CD, Vuica-Ross M, Borowitz MJ, Duffield AS. Targeted pathologic evaluation of bone marrow donors identifies previously undiagnosed marrow abnormalities. Biol Blood Marrow Transplant. 2013 Aug;19(8):1254-9.
Key words: cytogenetics, donor, flow cytometry, histology, marrow

13. Zhang M, Kao S, Ulbright TM, Epstein JI. Testicular fibrothecoma: a morphological and immunohistochemical study of 16 cases. Am J Surg Pathol. 2013 Aug;37(8):1208-14.
Key words: testis, sex cord stromal tumor, fibroma, thecoma

No PMID available

1. Al-Hussain TO, Cheng L, Zhang S, Epstein JI. Tubulocystic carcinoma of the kidney with poorly differentiated foci: A series of 3 cases with FISH analysis. Hum Pathol 2013 Jul;44:1406-11.
Key words: renal carcinoma, renal neoplasms, tubulocystic carcinoma, collecting duct carcinoma

2. Bishop JA, Yonescu R, Batista D, Eisele DW, Westra WH. Most nonparotid "acinic cell carcinomas" represent mammary analog secretory carcinomas. Am J Surg Pathol. 2013 Jul;37(7):1053-7.
Key words: mammary carcinoma, acinic cell carcinoma
PMID: 23681074

3. Burnham CA, Carroll KC. Diagnosis of clostridium difficile infection: an ongoing conundrum for clinicians and for clinical laboratories. Clin Microbiol Rev 2013 Jul;26(3):604-30.
Key words: colitis, clostridium difficile, toxin B, EIA, nucleic acid amplification

4. Cimino-Mathews A, Subhawong AP, Illei PB, Sharma R, Halushka MK, Vang R, Fetting JH, Park BH, Argani P. GATA3 expression in breast carcinoma: utility in triple-negative, sarcomatoid, and metastatic carcinomas. Hum Pathol 2013 Jul;44(7):1341-9.
Key words: breast, metastasis, GATA3

5. Clarke W, Rhea JM, Molinaro R. Challenges in implementing clinical liquid chromatography-tandem mass spectrometry methods - seeing the light at the end of the tunnel. J Mass Spectrom 2013 Jul;48(7):755-67.

6. Elbireer A, Le Chasseur J, Jackson B. Improving laboratory data entry quality using Six Sigma. Int J Health Care Qual Assurance 2013 July;26(6):496-509.
Key words: laboratory data, data entry, Six Sigma
no PMID available

7. Gonzalez-Roibon N, Katz B, Chaux A, Sharma R, Munari E, Faraj SF, Illei PB, Torbenson M, Netto GJ. Immunohistochemical expression of SALL4 in hepatocellular carcinoma, a potential pitfall in the differential diagnosis of yolk sac tumors. Hum Pathol 2013 Jul;44(7):1293-9.
Key words: immunohistochemistry, hepatocellular carcinoma, differential diagnosis, yolk sac tumor

8. Kanda M, Knight S, Topazian M, Syngal S, Farrell J, Lee J, Kamel I, Lennon AM, Borges M, Young A, Fujiwara S, Seike J, Eshleman J, Hruban RH, Canto MI, Goggins M. Mutant GNAS detected in duodenal collections of secretin-stimulated pancreatic juice indicates the presence or emergence of pancreatic cysts. Gut. 2013 Jul;62(7):1024-33.
Key words: GNAS, duodenum, secretin, pancreatic cysts

9. Laeyendecker O, Piwowar-Manning E, Fiamma A, Kulich M, Donnell D, Bassuk D, Mullis CE, Chin C, Vallari A, Hackett J, Jr., Clarke W, Marzinke M, Szekeres G, Gray G, Richter L, Mbwambo J, Chariyalertsak S, Chingono A, Celantano D, Morin SF, Sweat M, Coates T, Eshleman SH. Estimation of HIV incidence in a large, community-based, randomized clinical trial: NIMH Project Accept (HIV Prevention Trials Network 043). PLoS ONE 2013 July11;8(7): e68349.
Key words: HIV, clinical trial, prevention

10. Lee SY, Kang TH, Knoff J, Huang Z, Soong RS, Alvarez RD, Hung CF, Wu TC. Intratumoral injection of therapeutic HPV vaccinia vaccine following cisplatin enhances HPV-specific antitumor effects. Cancer Immunol Immunother. 2013 Jul;62(7):1175-85.
Key words: HPV, vaccine, cisplatin

11. Li A, Yu J, Kim H, Wolfgang CL, Canto MI, Hruban RH, Goggins M. MicroRNA array analysis finds elevated serum miR-1290 accurately distinguishes patients with low-stage pancreatic cancer from healthy and disease controls. Clin Cancer Res. 2013 Jul 1;19(13):3600-10.
Key words: Pancreatic cancer, marker, mir-1290, microRNA, serum

12. Munfus-McCray D, Cui M, Zhang Z, Gabrielson E, Askin F, Li QK. Comparison of EGFR and KRAS mutations in primary and unpaired metastatic lung adenocarcinoma with potential chemotherapy effect. Hum Pathol. 2013 Jul;44(7):1286-92.
Key words: EGFR, KRAS, lung adenocarcinoma, chemotherapy

13. Redd AD, Quinn TC, Tobian AAR. Frequency and Implications of HIV Superinfection. Lancet Infecti Dis. 2013 Jul;13(7):622-8.
Key words: HIV, superinfection

14. Yap KL, Shah PS, Bolon B, Wu RC, Gao M, Wang F, Faiola F, Huso D, Wang TL, Wang JL, Shih IM. Loss of NAC1 expression is associated with defective cell fate specification and bony patterning in the murine vertebral axis. PLoS One. 2013 Jul;8:e69099.
Key words: NAC1 expression, cell fate specification, bony patterning

15. Woodworth GF, Garzon-Muvdi T, Ye X, Blakeley JO, Weingart JD, Burger PC. Histopathological correlates with survival in reoperated glioblastomas. J Neurooncol. 2013 Jul;113(3):485-93.
Key words: histopathology, glioblastoma
PMID: 23666202

1. Babatz TD, Burns KH. Functional impact of the human mobilome. Curr Opin Genet Dev. 2013 Jun;23(3):264-70.
Key words: mobilome, retrotransposons

PMID: 23523050

2. Bishop JA, Ogawa T, Stelow EB, Moskaluk CA, Koch WM, Pai SI, Westra WH. Human papillomavirus-related carcinoma with adenoid cystic-like features: a peculiar variant of head and neck cancer restricted to the sinonasal tract. Am J Surg Pathol. 2013 Jun;37(6):836-44.
Key words: human papillomavirus, carcinoma, adenoid
PMID: 23598962

3. Bishop JA, Zhang W, Ioffe OB, Ali Z. Aspiration cytopathology of peripancreatic space: a clinicoradiologic and cytopathologic analyses of 42 cases. Korean J Pathol. 2013 Jun;47(3):258-64.
Key words: Peripancreatic space, cytopathology, fine needle aspiration, adenocarcino

4. Chu Q, Orr BA, Semenkow S, Bar EE, Eberhart CG. Prolonged inhibition of glioblastoma xenograft initiation and clonogenic growth following in vivo notch blockade. Clin Cancer Res. 2013 Jun 15;19(12):3224-33.
Key words: glioblastoma, xenograft, notch blockade

5. Cimino-Mathews A, Subhawong AP, Elwood H, Warzecha HN, Sharma R, Park BH, Taube JM, Illei PB, Argani P. Neural crest transcription factor Sox10 is preferentially expressed in triple-negative and metaplastic breast carcinomas. Hum Pathol. 2013 Jun;44(6):959-65.
Key words: Sox 10, breast carcinoma, metaplastic carcinoma, basal-like carcinoma, myoepithelial

6. Georgiades C, Rodriguez R, Azene E, Weiss C, Chaux A, Gonzalez-Roibon N, Netto G. Determination of the nonlethal margin inside the visible "ice-ball" during percutaneous cryoablation of renal tissue. Cardiovasc Intervent Radiol. 2013 Jun;36(3):783-90.
Key words: cryoablation, renal tissue

7. Jackson JB, Tao X, Sneed L, Humphrey-Carothers F, Bernacki E. Cost of annual tuberculosis screening of healthcare workers with negative tuberculin skin test results. Infect Control Hosp Epidemiol. 2013 Jun;34(6):642-3.
Key words: tuberculosis, screening, skin test

8. Li Y, Zheng Y, Izumi K, Ishiguro H, Ye B, Li F, Miyamoto H. Androgen activates ?-catenin signaling in bladder cancer cells. Endocr Relat Cancer. 2013 June 1;20(3):293-304.
Key words: androgen receptor, antiandrogen, bladder cancer, TCF/LEF, Wnt/?-catenin

9. Olson MT, Breaud A, Harlan R, Emezienna N, Schools S, Yergey AL, Clarke W. Alternative calibration strategies for the clinical laboratory: application to Nortriptyline therapeutic drug monitoring. Clin Chem. 2013 Jun;59(6):920-7.
Key words: Mass spectrometer, calebration, regulations and standards, therapeutic drug monitoring
PMID: 23426427

10. Savage WJ, Tobian AA, Savage JH, Wood RA, Schroeder JT, Ness PM. Scratching the surface of allergic transfusion reactions. Transfusion.2013 Jun;53(6):1361-71.
Key words: allergic reaction, transfusion
PMID: 22998777

11. Shinohara DB, Vaghasia AM, Yu SH, Mak TN, Brüggemann H, Nelson WG, De Marzo AM, Yegnasubramanian S, Sfanos KS. A mouse model of chronic prostatic inflammation using a human prostate cancer-derived isolate of Propionibacterium acnes. Prostate. 2013 Jun;73(9):1007-15.
Key words: prostate, propionibacterium acnes, inflammation, mouse model
PMID: 23389852

12. Tobian AA, Grabowski MK, Kigozi G, Redd AD, Eaton KP, Serwadda D, Cornish TC, Nalugoda F, Watya S, Buwembo D, Nkale J, Wawer MJ, Quinn TC, Gray RH. Human papillomavirus clearance in men is associated with HIV acquisition and increased foreskin dendritic cell density in Rakai, Uganda. J Infect Dis. 2013 Jun;207(11):1713-22.
Key words: human papillomavirus, HIV, foreskin, Uganda

13. Vandenbussche CJ, Khouri N, Sbaity E, Tsangaris TN, Vang R, Tatsas A, Cimino-Mathews A, Argani P. Borderline atypical ductal hyperplasia/low-grade ductal carcinoma in situ on breast needle core biopsy should be managed conservatively. Am J Surg Pathol. 2013 Jun;37(6):913-23.
Key words: breast, carcinoma in situ, atypical duct hyperplasia, needle biopsy

14. Wang J, Liu J, Yao F, Wen G, Li J, Huang Y, Lü Y, Wen X, Wright D, Yu Q, Guo N, Ness P, Shan H; NHLBI Retrovirus Epidemiology Donor Study-II (REDS-II) and International Component. Prevalence, incidence, and residual risks for transfusion-transmitted human immunodeficiency virus Types 1 and 2 infection among Chinese blood donors. Transfusion. 2013 Jun;53(6):1240-9.
Key words: transfusion, HIV, China, blood donor

PMID: 23113801

15. Zheng G, Ettinger DS, Maleki Z. Utility of the quantitative Ki-67 proliferation index and CD56 together in the cytologic diagnosis of small cell lung carcinoma and other lung neuroendocrine tumors. Acta Cytol. 2013 May-June;57(3):281-90.
PMID: 23635388

1. Barin JG, Ciháková D. Control of inflammatory heart disease by CD4(+) T cells. Ann N Y Acad Sci. 2013 May;1285(1):80-96.
Key words: inflammatory heart disease, CD4+ T cells
PMID: 23692566

2. Brimo F, Montironi R, Egevad L, Erbersdobler A, Lin DW, Nelson JB, Rubin MA, van der Kwast T, Amin M, Epstein JI. Contemporary grading for prostate cancer: Implications for patient care. Eur Urol. 2013 May;63:892-901.
Key words: prostate cancer; Gleason grade
PMID: 23092544

3. Bishop JA, Yonescu R, Batista DA, Westra WH, Ali SZ. Cytopathologic features of mammary analogue secretory carcinoma. Cancer Cytopathol. 2013 May;121(5):228-33.
Key words: mammary analogue secretory carcinoma, cytopathology
PMID: 23042752

4. Elbireer AM, Jackson JB, Sendargire H, Opio A, Bagenda D, Amukele TK. The good, the bad, and the unknown: quality of clinical laboratories in Kampala, Uganda. PLoS ONE. 2013 May;8(5):e64661.
Key words: Uganda, clinical laboratories
PMID: 23737993

5. Kent OA, Fox-Talbot K, Halushka MK. RREB1 repressed miR-143/145 modulates KRAS signaling through downregulation of multiple targets. Oncogene. 2013 May 16;32(20):2576-85.
Key words: KRAS, RREB1, signaling
PMID: 22751122

6. Kurman RJ, Visvanathan K, Shih IeM. Bokhman's dualistic model of endometrial carcinoma. Revisited. Gynecol Oncol. 2013 May;129(2):271-2.
Key words: endometrial carcinoma
PMID: 23582581

7. Mak TN, Yu SH, De Marzo AM, Brüggemann H, Sfanos KS. Multilocus sequence typing (MLST) analysis of Propionibacterium acnes isolates from radical prostatectomy specimens. Prostate. 2013 May;73(7):770-7.
Key words: prostate cancer; inflammation; Propionibacterium acnes; MLST; infection
PMID: 23184509

8. Maleszewski JJ, Murray DL, Dispenzieri A, Grogan M, Pereira NL, Jenkins SM, Judge DP, Caturegli P, Vrana JA, Theis JD, Dogan A, Halushka MK. Relationship between monoclonal gammopathy and cardiac amyloid type. Cardiovasc Pathol. 2013 May-Jun;22(3):189-94.
Key words: monoclonal gammopathy, cardiac amyloid
PMID: 23102805

9. Netto GJ. Clinical applications of recent molecular advances in urologic malignancies: no longer chasing a "mirage"? Adv Anat Pathol. 2013 May;20(3):175-203.
Key words: urologic malginancy
doi: 10.1097/PAP.0b013e3182863f80
PMID: 23574774

10. Nguyen DN, Heaphy CM, de Wilde RF, Orr BA, Odia Y, Eberhart CG, Meeker AK, Rodriguez FJ. Molecular and morphologic correlates of the alternative lengthening of telomeres phenotype in high-grade astrocytomas. Brain Pathol 2013 May;23(3):237-43.
Key words: telomeres, phenotype, astrocytomas
PMID: 22928601

11. Pierorazio PM, Walsh PW, Partin AW, Epstein JI. Prognostic Gleason grade grouping: data based on the modified Gleason scoring system. BJU Int 2013 May;111:753-60.
Key words: Gleason grading, prostate cancer
PMID: 23464824

12. Ruzevick J, Olivi A, Westra WH. Metastatic squamous cell carcinoma to the brain: an unrecognized pattern of distant spread in patients with HPV-related head and neck cancer. J Neurooncol. 2013 May;112(3):449-54.
Key words: metastatic squamous cell carcinoma, brain cancer, HPV
PMID: 23408186

13. Vandenbussche CJ, Gocke CD, Li QK. Fine-needle aspiration of metastatic papillary thyroid carcinoma found in the liver. Diagn Cytopathol. 2013 May;41(5):418-24.
Key words: fine-needle aspiration, papillary thyroid carcinoma, liver cancer
PMID: 22362717

1. Diolombi M, Ross HM, Mercalli F, Sharma R, Epstein JI. Nephrogenic adenoma: a report of 3 unusual cases infiltrating into perinephric adipose tissue. Am J Surg Pathol 2013 Apr;37(4):532-8.
Key words: nephrogenic adenoma,renal pevis

2. Fogel J, Mwatha A, Richardson P, Brown E, Chipato T, Alexandre M, Moodley D, Elbireer A, Mirochnick M, George K, Mofenson LM, Zwerski S, Coovadia HM, Eshleman SH. Impact of maternal and infant antiretroviral drug regimens on drug resistance in HIV-infected breastfeeding infants. Pediatr Infect Dis J 2013 Apr;32(4):e164-e169.
Key words: HIV, infant, antiretroviral, drug, breastfeeding
PMID: 23249916

3. Gonzalez-Roibon ND, Chaux A, Al-Hussain T, Osunkoya AO, Bezerra SM, Hicks J, Epstein JI, Netto GJ. Dysregulation of mammalian target of rapamycin pathway in plasmacytoid variant of urothelial carcinoma of the urinary bladder. Hum Pathol 2013 Apr;44(4):612-22.
PMID: 23084634

4. Lee RW, Bodurtha J, Cohen J, Fatemi A, Batista D. Deletion 12p12 involving SOX5 in two children with developmental delay and dysmorphic features. Pediatr Neurol 2013 Apr;48(4):317-20.
Key words: SOX5, 12p12, microarray, chondrogenesis, microdeletion
PMID: 23498568

5. Lewis GH, Wang H, Bellizzi AM, Klein AP, Askin FB, Schwartz LE, Schulick RD, Wolfgang CL, Cameron CL, O'Reilly EM, Yu KH, Hruban RH. Prognosis of minimally invasive carcinoma arising in mucinous cystic neoplasms of the pancreas. Am J Surg Pathol 2013 Apr;37(4):601-5.
Key words: pancreas, mucinous cystic neoplasm

6. Lotan TL, Gumuskaya B, Rahimi H, Hicks JL, Iwata T, Robinson BD, Epstein JI, De Marzo AM. Cytoplasmic PTEN protein loss distinguishes intraductal carcinoma of the prostate from high-grade prostatic intraepithelial neoplasia. Mod Pathol 2013 Apr;26(4):587-603.

7. Lyons JL, Roos KL, Marr KA, Neumann H, Trivedi JB, Kimbrough DJ, Steiner L, Thakur KT, Harrison DM, Zhang SX. Cerebrospinal fluid (1,3) ?-D-glucan detection as an aid to diagnose iatrogenic fungal meningitis. J Clin Microbiol 2013 April;51(4):1285-7.
Key words: fungal meningitis, outbreak, cerebrospinal fluid, beta-D-glucan
PMID: 23363831

8. Shah P, Yang S, Sun S, Aiyetan P, Yarema KJ, Zhang H. Mass spectrometric analysis of sialylated glycans with use of solid-phase labeling of sialic acids. Anal Chem 2013 Apr 2;85(7):3606-13.
PMID: 23445396

9. Sharma P, Montgomery E. Gastrointestinal dysplasia. Pathology JRCPA Apr 2013;45(3):273-85.


10. Takemoto CM, Streiff MB, Shermock KM, Kraus PS, Chen J, Jani J, Kickler T. Am J Clin Pathol. 2013 Apr;139(4):450-6.

11. Treml A, King KE. Red blood cell alloimmunization: lessons from sickle cell disease. Transfusion. 2013 Apr;53(4):692-5.


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