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October 2021
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Neuroscience Archives

1. Babola TA, Kersbergen CJ, Wang HC, Bergles DE. Purinergic signaling in cochlear supporting cells reduces hair cell excitability by increasing the extracellular space. Elife. 2020 Jan 8;9. pii: e52160. doi: 10.7554/eLife.52160. [Epub ahead of print]
Key words: purinergic, cochlear, excitability
https://www.ncbi.nlm.nih.gov/pubmed/31913121

2. Day KA, Bastian AJ. Providing low-dimensional feedback of a high-dimensional movement allows for improved performance of a skilled walking task. Sci Rep. 2019 Dec 24;9(1):19814. doi: 10.1038/s41598-019-56319-9.
Key words: performance, skilled, walking
https://www.ncbi.nlm.nih.gov/pubmed/31875040

3. Day KA, Cherry-Allen KM, Bastian AJ. Individualized feedback to change multiple gait deficits in chronic stroke. J Neuroeng Rehabil. 2019 Dec 23;16(1):158. doi: 10.1186/s12984-019-0635-4.
Key words: gait, stroke
https://www.ncbi.nlm.nih.gov/pubmed/31870390

4. Galasko D, Xiao M, Xu D, Smirnov D, Dewit N, Vanbrabant J, Jacobs D, Vanderstichele H, Vanmechelen E, Alzheimer's Disease Neuroimaging Initiative (ADNI), Worley P. Synaptic biomarkers in CSF aid in diagnosis, correlate with cognition and predict progression in MCI and Alzheimer's disease. Alzheimers Dement (N.Y.) 2019;5:871-882.
Key words: CSF, MCI, Alzheimer's
https://www.ncbi.nlm.nih.gov/pubmed/31853477

1. Doughtery SE, Kajstura TJ, Jin Y, Chan-Cortés MH, Kota A, Linden DJ. Catecholaminergic axons in the neocortex of adult mice regrow following brain injury. Exp Neurol. 2019 Nov 4;323:113089. doi: 10.1016/j.expneural.2019.113089. [Epub ahead of print].
Key words: Catecholaminergic, axons, brain, injury
https://www.ncbi.nlm.nih.gov/pubmed/31697941

2. GoodSmith D, Lee H, Neunuebel JP, Song H, Knierim JJ. Dentate gyrus mossy cells share a role in pattern separation with dentate granule cells and proximal CA3 pyramidal cells. J Neurosci. 2019 Oct 21. pii: 0940-91. doi: 10.1523/JNEUROSCI.0940-19.2019. [Epub ahead of print].
Key words: pattern separation, CA3

https://www.ncbi.nlm.nih.gov/pubmed/31641051

3. Kodama T, Gittis A, Shin M, Kelleher K, Kolkman K, McElvain L, Lam M, du Lac S. Graded co-expression of ion channel, neurofilament, and synaptic genes in fast-spiking vestibular nucleus neurons. J Neurosci. 2019 Nov 12. pii: 1500-19. doi: 10.1523/JNEUROSCI.1500-19.2019. [Epub ahead of print].
Key words: neurofilament, spiking vestibular, neurons
https://www.ncbi.nlm.nih.gov/pubmed/31719168

4. Tran T, Bridi M, Koh MT, Gallagher M, Kirkwood A. Reduced cognitive performance in aged rats correlates with increased excitation/inhibition ratio in the dentate gyrus in response to lateral entorhinal input. Neurobiol Aging. 2019 Oct;82:120-127. doi: 10.1016/j.neurobiolaging.2019.07.010. Epub 2019 Jul 23.
Key words: cognitive, aged, rats
https://www.ncbi.nlm.nih.gov/pubmed/31476654

5. Vandaele Y, Mahajan NR, Ottenheimer DJ, Richard JM, Mysore SP, Janak PH. Distinct recruitment of dorsomedial and dorsolateral striatum erodes with extended training. Elife. 2019 Oct 17;8. pii: e49536. doi: 10.7554/eLife.49536.
Key words: recruitment, dorsolateral striatum, training

https://www.ncbi.nlm.nih.gov/pubmed/31621583

6. Vasavda C, Kothari R, Malla AP, Tokhunts R, Lin A, Ji M, Ricco C, Xu R, Saavedra HG, Sbodio JI, Snowman AM, Albacarys L, Hester L, Sedlak TW, Paul BD, Snyder SH. Bilirubin links heme metabolism to neuroprotection by scavenging superoxide. Cell Chem Biol. 2019 Oct 17;26(10):1450-1460.e7. doi: 10.1016/j.chembiol.2019.07.006. Epub 2019 Jul 25.
Key words: bilirubin, neuroprotection
https://www.ncbi.nlm.nih.gov/pubmed/31353321

1. Afify A, Betz JF, Riabinina O, Lahondère C, Potter CJ. Commonly used insect repellents hide human odors from anopheles mosquitoes. Curr Biol. 2019 Oct 15. pii: S0960-9822(19)31167-4. doi: 10.1016/j.cub.2019.09.007. [Epub ahead of print].
Key words: insect, repellents, odors, anopheles
https://www.ncbi.nlm.nih.gov/pubmed/31630950

2. Britson KA, Black AD, Wagner KR, Lloyd TE. Performing human skeletal muscle xenografts in immunodeficient mice. J Vis Exp. 2019 Sep 16;(151). doi: 10.3791/59966.
Key words: human, muscle, xenografts, mice
https://www.ncbi.nlm.nih.gov/pubmed/31566598

3. Chokshi V, Gao M, Grier BD, Owens A, Wang H, Worley PF, Lee HK. Input-specific metaplasticity in the visual cortex requires Homer1a-mediated mGluR5 signaling. Neuron 2019 Sep 5. S0896-6273(19)30701-9. doi: 10.1016/j.neuron.2019.08.017. [Epub ahead of print].
Key words: metaplasticity, visual, homer1a, mGluR5
https://www.ncbi.nlm.nih.gov/pubmed/31563294

4. Ehmsen JT, Kawaguchi R, Mi R, Coppola G, Höke A. Longitudinal RNA-Seq analysis of acute and chronic neurogenic skeletal muscle atrophy. Sci Data. 2019 Sep 24;6(1):179. doi: 10.1038/s41597-019-0185-4.
Key words: RNA-Seq, skeletal, muscle, atrophy
https://www.ncbi.nlm.nih.gov/pubmed/31551418

5. Frandolig JE, Matney CJ, Lee K, Kim J, Chevée M, Kim SJ, Bickert AA, Brown S3. The synaptic organization of layer 6 circuits reveals inhibition as a major output of a neocortical sublamina. Cell Rep. 2019 Sep 17;28(12):3131-3143.e5. doi: 10.1016/j.celrep.2019.08.048.
Key words: inhibition, neocortical, sublamina
https://www.ncbi.nlm.nih.gov/pubmed/31533036

6. Ramos DM, d'Ydewalle C, Gabetta V, Dakka A, Klein SK, Norris DA, Matson J, Taylor SJ, Zaworski PG, Prior TW, Snyder PJ, Valdivia D, Hatem CL, Waters I, Gupte N, Swoboda KJ, Rigo F, Bennett CF, Naryshkin N, Paushkin S, Crawford TO, Sumner CJ. Age-dependent SMN expression in disease-relevant tissue and implications for SMA treatment. J Clin Invest. 2019 Oct 7. pii: 123120. doi: 10.1172/JC1124120. [Epub ahead of print].
Key words: age, SMN, treatment
https://www.ncbi.nlm.nih.gov/pubmed/31589162

7. Xie X, Tabuchi M, Corver A, Duan G, Wu MN, Kolodkin AL. Semaphorin 2b regulates sleep-circuit formation in the Drosophila central brain. Neuron 2019 Sep 26. pii: S0896-6273(19)30645-2. doi: 10.1016/j.neuron.2019.07.019. [Epub ahead of print].
Key words: semaphorin 2b, sleep-circuit, drosophila
https://www.ncbi.nlm.nih.gov/pubmed/31564592

1. Donde A1,2, Sun M1, Ling JP1,2, Braunstein KE1, Pang B1, Wen X1, Cheng X1, Chen L3, Wong PC4,5. Splicing Repression in a Major Function of TDP-43 in Motor Neurons.
Acta Neuropathol 2019 Jul 22. doi: 10.1007/s00401-019-02042-8. [Epub ahead of print].
Key words: splicing, repression, TED-43, neurons
https://www.ncbi.nlm.nih.gov/pubmed/?term=Splicing+repression+
in+a+major+function+of+TDP-43+in+motor+neurons

2. Dunn-Weiss E1,2, Nummela SU1,2, Lempel AA1,2, Law J2, Ledley J2, Salvino P2, Nielsen KJ3,2. Visual Motion and Form Integration in the Behaving Ferret.
eNeuro 2019 Aug 1. pii: ENEURO.0228-19.2019. doi: 10.1523/ENEURO.0228-19.2019. [Epub ahead of print].
Key words: visual, motion, ferret
https://www.ncbi.nlm.nih.gov/pubmed/?term=Visual+
Motion+and+Form+Integration+in+the+Behaving+Ferret


3. Rattner A1, Williams J1,2, Nathans J1,2,3,4. Roles of HIFs and VEGF in Angiogenesis in the Retina and Brain.
J Clin Invest 2019 Aug 12;130. pii:126655. doi: 10.1172/JC1126655. eCollection 2019 Aug 12.
Key words: HIFs, VEGF, angiogenesis, retina, brain
https://www.ncbi.nlm.nih.gov/pubmed/?term=Roles+of+HIFs+
and+VEGF+in+Angiogenesis+in+the+Retina+and+Brain

4. Rodriguez G1, Mesik L2,3, Gao M2, Parkins S1, Saha R2, Lee HK4,2,3. Disruption of NMDA Receptor Function Prevents Normal Experience-dependent Homeostatic Synaptic Plasticity in Mouse Primary Visual Cortex.
J Neurosci 2019 Aug 14. pii: 2117-18. doi: 10.1523/JNEUROSCI.2117-18.2019. [Epub ahead of print].
Key words: NMDA, homeostatic, synaptic, plasticity, visual
https://www.ncbi.nlm.nih.gov/pubmed/?term=Disruption+of+NMDA+
Receptor+Function+Prevents+Normal+Experience-dependent+Homeostatic+Synaptic+
Plasticity+in+
Mouse+Primary+Visual+Cortex

5. Vasavda C1, Kothari R1, Malla AP1, Tokhunts R2, Lin A3, Ji M4, Ricco C1, Xu R5, Saavedra HG6, Sbodio JI1, Snowman AM1, Albacarys L1, Hester L1, Sedlak TW7, Paul BD8, Snyder SH9. Bilirubin Links Heme Metabolism to Neuroprotection by Scavenging Superoxide.
Cell Chem Biol 2019 Jul 23. pii: S2451-9456(19)30218-1. doi: 10.1016/j.chembiol. 2019.07.006.
Key words: bilirubin, heme, neuroprotection
https://www.ncbi.nlm.nih.gov/pubmed/?term=Bilirubin+Links+Heme+
Metabolism+to+Neuroprotection+by+Scavenging+Superoxide

6. Yin X, Xu JC, Cho GS, Kwon C, Dawson TM, Dawson VL. Neurons derived from human induced pluripotent stem cells integrate into rat brain circuits and maintain both excitatory and inhibitory synaptic activities. eNeuro, 2019 Aug 14. pii: ENEURO.0148-19.2019. doi: 1523/ENEURO.0148-19.2019. [Epub ahead of print].
Key words: human, induced, pluripotent, stem, cells, brain, circuits
https://www.ncbi.nlm.nih.gov/pubmed/31413152

1. Fraser KM, Janak PH. Occasion setters attain incentive motivational value: implications for contextual influences on reward-seeking. Learn Mem. 2019 Jul 15;26(8):291-298. doi: 10.1101/lm.049320.119. Print 2019 Aug.
Key words: occasion, setters, reward
https://www.ncbi.nlm.nih.gov/pubmed/31308248

2. Mi R, Tammia M, Shinn D, Li Y, Martin R, Mao HQ, Höke A. Oligodendrocyte precursors gain Schwann cell-like phenotype and remyelinate axons upon engraftment into peripheral nerves. J Tissue Eng Regen Med. 2019 Jul 15. doi: 10.1002/term.2935. [Epub ahead of print].
Key words: oligodendrocyte, remyelinate, peripheral

https://www.ncbi.nlm.nih.gov/pubmed/31306565

3. Peng X, Williams J, Smallwood PM, Nathans J. Defining the binding interface of Amyloid Precursor Protein (APP) and Contactin3 (CNTN3) by site-directed mutagenesis. PLoS One. 2019 Jul 18;14(7): e0219384. doi: 10.1371/journal.pone.0219384. eCollection 2019.
Key words: binding, APP, CNTN3
https://www.ncbi.nlm.nih.gov/pubmed/31318883

4. Pilato CM, Park HJ, Kong L, d'Ydewalle C, Valdivia D, Chen KS, Griswold-Prenner I, Sumner CJ. Motor neuron loss in SMA is not associated with somal stress-activated JNK/c-Jun Signaling. Hum Mol Genet. 2019 Jul 4. pii: ddz150. doi: 10.1093/hmg/ddz150. [Epub ahead of print].
Key words: neuron, loss, SMA, JNK
https://www.ncbi.nlm.nih.gov/pubmed/31272106

5. Pundir P, Liu R, Vasavda C, Serhan N, Limjunyawong N, Yee R, Zhan Y, Dong X, Wu X, Zhang Y, Snyder SH, Gaudenzio N, Vidal JE, Dong X. A connective tissue mast-cell-specific receptor detects bacterial quorum-sensing molecules and mediates antibacterial immunity. Cell Host Microbe. 2019 Jul 10;26(1):114-122.e8. doi: 10.1016/j.chom.2019.06.003.
Key words: mast, antibacterial, immunity
https://www.ncbi.nlm.nih.gov/pubmed/31278040

1. Clark BS, Stein-O'Brien GL, Shiau F, Cannon GH, Davis-Marcisak E, Sherman T, Santiago CP, Hoang TV, Rajaii F, James-Esposito RE, Gronostajski RM, Fertig EJ, Goff LA, Blackshaw S. Single-cell RNA-Seq analysis of retinal development identifies NFI Factors as regulating mitotic exit and late-born cell specification.
Neuron. 2019 Jun 19;102(6):1111-1126.e5. doi: 10.1016/j.neuron.2019.04.010. Epub 2019 May 22.
Key words: retinal, NFI factors, cell specification

https://www.ncbi.nlm.nih.gov/pubmed/31128945

2. Hu B, von der Heydt R, Niebur E. Figure-ground organization in natural scenes: performance of a recurrent neural model compared with neurons of area V2. eNeuro. 2019 June 5. pii: ENEURO.0479-18.2019. doi: 10.1523/ENEURO.0479-18.2019. [Epub ahead of print].
Key words: figure-ground, neural model, V2
https://www.ncbi.nlm.nih.gov/pubmed/31167850

3. Prajapati-DiNubila M, Benito-Gonzalez A, Golden EJ, Zhang S, Doetzlhofer A. A counter gradient of Activin A and follistatin instructs the timing of hair cell differentiation in the murine cochlea.
Elife. 2019 Jun 12;8. pii: e47613. doi: 10.7554/eLife.47613.
Key words: Activin, follistatin, cochlea
https://www.ncbi.nlm.nih.gov/pubmed/31187730

4. Zhang W, Chuang YA, Na Y, Ye Z, Yang L, Lin R, Zhou J, Wu J, Qiu J, Savonenko A, Leahy DJ, Huganir R, Linden DJ, Worley PF. Arc oligomerization is regulated by CaMKII phosphorylation of the GAG domain: an essential mechanism for plasticity and memory formation. Mol Cell. 2019 May 23. pii: S1097-2765(19)30357-0. doi:10.1016/j.molcel.2019.05.004.. [Epub ahead of print].
Key words: Arc; CAMKII; capsid; evolution; learning and memory; phosphorylation; polymerization; synapse plasticity
https://www.ncbi.nlm.nih.gov/pubmed/31151856

1. Cho C, Wang Y, Smallwood PM, Williams J, Nathans J. Dlg1 activates beta-catenin signaling to regulate retinal angiogenesis and the blood-retina and blood-brain barriers. Elife. 2019 May 8;8. pii: e45542. doi: 10.7554/eLife.45542.
Key words: blood-brain barrier; blood-retina barrier; canonical Wnt signaling; developmental biology; genetics; genomics; mouse; mouse genetics; retinal angiogenesis; vascular endothelial cells
https://www.ncbi.nlm.nih.gov/pubmed/31066677

2. Faria AV, Crawford J, Ye C, Hsu J, Kenkare A, Schretlen D, Sawa A. Relationship between
neuropsychological behavior and brain white matter in first-episode psychosis.
Schizophr Res. 2019 Apr 13. pii: S0920-9964(19)30135-5. doi: 10.1016/j.schres.2019.04.010.
Key words: neuropsychological, white, matter, psychosis
https://www.ncbi.nlm.nih.gov/pubmed/30987924

3. Fischback-Weiss S1, Janak P2. Decreases in cued reward seeking after reward-paired inhibition of mesolimbic dopamine. Neuroscience. 2019 Apr 25. pii: S0306-4522(19)30284-2. doi:10.1016/j.neuroscience.2019.04.035. [Epub ahead of print].
Key words: reward, seeking, dopamine
https://www.ncbi.nlm.nih.gov/pubmed/31029728

4. Guha P, Snyder SH. Noncatalytic functions of IPMK are essential for activation of autophagy and liver regeneration. Autophagy. 2019 May 8:1-2. doi: 10.1080/15548627.2019.1615305. [Epub ahead of print].
Key words: IPMK, autophagy, liver, regeneration
https://www.ncbi.nlm.nih.gov/pubmed/31066329

5. Heng JS, Rattner A, Stein-O'Brien GL, Winer BL, Jones BW, Vernon HJ, Goff LA, Nathans J. Hypoxia tolerance in the Norrin-deficient retina and the chronically hypoxic brain studied at single-cell resolution. Proc Natl Acad Sci U S A. 2019 Apr 30;116(18):9103-9114. doi: 10.1073/pnas.1821122116. Epub 2019 Apr 15.
Key words: Norrin, retina, hypoxic, single, cell
https://www.ncbi.nlm.nih.gov/pubmed/30988181

6. Jeck DM, Qin M, Egeth H, Niebur E. Unique objects attract attention even when faint.
Vision Res. 2019 Apr 29. pii: S0042-6989(19)30088-4. doi: 10.1016/j.visres.2019.04.004. [Epub ahead of print].
Key words: objects, attention, faint
https://www.ncbi.nlm.nih.gov/pubmed/31047908

7. John J, Thirunavukkarasu P, Ishizuka K, Parekh P, Sawa A. An in-silico approach for discovery of microRNA-TF regulation of DISC1 interactome mediating neuronal migration.
PJ Syst Biol Appl. 2019 May 7;5:17. doi: 10.1038/s41540-019-0094-3. eCollection 2019.
Key words: in-silico, DISC1, interactome
https://www.ncbi.nlm.nih.gov/pubmed/31098296

8. Meixiong J, Anderson M, Limjunyawong N, Sabbagh MF, Hu E, Mack MR, Oetjen LK, Wang F, Kim BS, Dong X4. Activation of mast-cell-expressed mas-related G-protein-coupled receptors drives non-histaminergic itch. Immunity. 2019 Apr 23. pii: S1074-7613(19)30130-X. doi: 10.1016/j.immuni.2019.03.013. [Epub ahead of print].
Key words: G, protein, non-histaminergic, itch
https://www.ncbi.nlm.nih.gov/pubmed/31027996

9. Meixiong J, Vasavda C, Snyder SH, Dong X. MRGPRX4 is a G protein-coupled receptor activated by bile acids that may contribute to cholestatic pruritus. Proc Natl Acad Sci U S A. 2019 May 8. pii: 201903316. doi:10.1073/pnas.1903316116. [Epub ahead of print].
Key words: MRGPRX4, cholestatic, pruritus
https://www.ncbi.nlm.nih.gov/pubmed/31068464

10. Wang Y, Sabbagh MF, Gu X, Rattner A, Williams J, Nathans J. Beta-catenin signaling regulates barrier-specific gene expression in circumventricular organ and ocular vasculatures. Elife. 2019 Apr 1;8. pii: e43257. doi: 10.7554/eLife.43257.
Key words: beta, catenin, ocular, vasculatures
https://www.ncbi.nlm.nih.gov/pubmed/30932813

11. Ye Z, Cudmore RH, Linden DJ. Estrogen-dependent functional spine dynamics in neocortical pyramidal neurons of the mouse. J.Neurosci. 2019 Apr 16. pii: 2772-18. doi: 10.1523/JNEUROSCI.2772-18.2019. [Epub ahead of print].
Key words: estrogen, dependent, spine, mouse
https://www.ncbi.nlm.nih.gov/pubmed/30992373

12. Younes L, Albert M, Moghekar A, Soldan A, Pettigrew C, Miller MI. Identifying changepoints in biomarkers during the preclinical phase of Alzheimer's Disease. Front Aging Neurosci. 2019 Apr 2;11:74. doi: 10. 10.3389/fnagi.2019.00074. eCollection 2019.
https://www.ncbi.nlm.nih.gov/pubmed/31001108

13. Zibetti C, Liu S, Wan J, Qian J, Blackshaw S. Epigenomic profiling of retinal progenitors reveals LHX2 is required for developmental regulation of open chromatin. Commun Biol. 2019 Apr 25;2:142. doi: 10.1038/s42003-019-0375-9. eCollection 2019.
https://www.ncbi.nlm.nih.gov/pubmed/31044167

1. Chikshi V, Druciak B, Worley PF, Lee HK. Homer1A is required for establishment of contralateral bias and maintenance of ocular dominance in mouse visual cortex. J. Neurosci. 2019 Mar 13. pii: 3188-18. doi: 10.1523/JNEUROSCI.3188-18.2019. [Epub ahead of print].
Key words: Homer1a, ocular, dominance
https://www.ncbi.nlm.nih.gov/pubmed/30867257

2. Miller SJ, Philips T, Kim N, Dastgheyb R, Chen Z, Hsieh YC, Daigle JG, Datta M, Chew J, Vidensky S, Pham JT, Hughes EG, Robinson MB, Sattler R, Tomer R, Suk JS, Bergles DE, Haughey N, Pletnikov M, Hanes J, Rothstein JD. Molecularly defined cortical astroglia subpopulation modulates neurons via secretion of Norrin. Nat Neurosci. 2019 May;22(5):741-752.
Key words: astroglia, Norrin
https://www.ncbi.nlm.nih.gov/pubmed/30936556

3. Nardou R, Lewis EM, Rothhaas R, Xu R, Yang A, Boyden E, Dölen G. Oxytocin-dependent reopening of a social reward learning critical period with MDMA. Nature. 2019 Apr 3. doi: 10.1038/s41586-019-1075-9. [Epub ahead of print].
Key words: critical, period, MDMA
https://www.ncbi.nlm.nih.gov/pubmed/30944474

4. Vyas P, Wu JS, Jimenez A, Glowatzki E, Fuchs PA. Characterization of transgenic mouse lines for labeling Type I and Type II afferent neurons in the cochlea. Sci Rep. 2019 Apr 3;9(1):5549. doi: 10.1038/s41598-019-41770-5.
Key words: type I, type II, neurons, cochlea
https://www.ncbi.nlm.nih.gov/pubmed/30944354

5. Weyemi U, Paul BD, Bhattacharya D, Malla AP, Boufraqech M, Harraz MM, Bonner WM, Snyder SH. Histone H2AX promotes neuronal health by controlling mitochondrial homeostasis.
Proc Natl Acad Sci USA. 2019 Apr 9;116(15):7471-7476. doi: 10.1073/pnas.1820245116.
Key words: H2AX, mitochondrial, homeostasis
https://www.ncbi.nlm.nih.gov/pubmed/30910969

6. Yoo S, Cha D, Kim DW, Hoang TV, Blackshaw S. Tanycyte-Independent control of hypothalamic leptin signaling. Front Neurosci. 2019 Mar 19;13:240. doi: 10.3389/fnins.2019.00240. eCollection 2019.
Key words: tanycyte, leptin, signaling
https://www.ncbi.nlm.nih.gov/pubmed/30941008

1. Fernandes D, Santos SD, Coutinho E, Whitt JL, Beltrão N, Rondão T, Leite MI, Buckley C, Lee HK, Carvalho AL. Disrupted AMPA receptor function upon genetic- or antibody-mediated loss of autism-associated CASPR2. Cereb Cortex. 2019 Mar 4. pii: bhz032. doi: 10.1093/cercor/bhz032. [Epub ahead of print].
Key words: AMPA, autism, CASPR2
https://www.ncbi.nlm.nih.gov/pubmed/30843029

2. Guha P, Tyagi R, Chowdhury S, Reilly L, Fu C, Xu R, Resnick AC, Snyder SH. IPMK mediates activation of ULK signaling and transcriptional regulation of autophagy linked to liver inflammation and regeneration.
Cell Rep. 2019 Mar 5;26(10):2692-2703.e7. doi: 10.1016/j.celrep.2019.02.013.
Key words: IPMK, autophagy, liver, regeneration
https://www.ncbi.nlm.nih.gov/pubmed/30840891

3. Kulason S, Tward DJ, Brown T, Sicat CS, Liu CF, Ratnanather JT, Younes L, Bakker A, Gallagher M, Albert M, Miller MI; Alzheimer's Disease Neuroimaging Initiative. Cortical thickness atrophy in the transentorhinal cortex in mild cognitive impairment. Neuroimage Clin. 2019;21:101617. doi: 10.1016/j.nicl.2018.101617. Epub 2018 Dec 5.
Key words: cortical, thickness, cognitive, impairment
https://www.ncbi.nlm.nih.gov/pubmed/30552075

4. Park J, Longo F, Park SJ, Lee S, Bae M, Tyagi R, Han JH, Kim S, Santini E, Klann E, Snyder SH. Inositol polyphosphate multikinase mediates extinction of fear memory. Proc Natl Acad Sci U S A. 2019 Feb 12;116(7):2707-2712. doi: 10.1073/pnas.1812771116.
Key words: inositol, polyphosphate, multikinase, memory
https://www.ncbi.nlm.nih.gov/pubmed/30692248

5. Severson KS, Xu D, Yang H, O'Connor DH. Coding of whisker motion across the mouse face. Elife. 2019 Feb 28;8. pii: e41535.
Key words: coding, whisker, mouse
https://www.ncbi.nlm.nih.gov/pubmed/30816844

6. Xu Q, Dong X. Calcium imaging approaches in investigation of pain mechanism in the spinal cord.
Exp Neurol. 2019 Mar 7. pii: S0014-4886(19)30039-1. doi: 10.1016/j.expneurol.2019.03.002.
Key words: calcium imaging, spinal cord
https://www.ncbi.nlm.nih.gov/pubmed/30853387

7. Yue WWS, Silverman D, Ren X, Frederiksen R, Sakai K, Yamashita T, Shichida Y, Cornwall MC, Chen J, Yau KW. Elementary response triggered by transducin in retinal rods.
Proc Natl Acad Sci U S A. 2019 Mar 12;116(11):5144-5153. https://www.ncbi.nlm.nih.gov/pubmed/30796193

1. Andzelm MM, Vanness D, Greenberg ME, Linden DJ. A late phase of long-term synaptic depression in cerebellar Purkinje cells requires activation of MEF2. Cell Rep. 2019 Jan 29;26(5):1089-1097. doi: 10.1016/j.celrep.2019.01.004.
Key words: late phase, synaptic depression, MEF2
https://www.ncbi.nlm.nih.gov/pubmed/30699340

2. Green DP, Limjunyawong N, Gour N, Pundir P, Dong X. A mast-cell-specific receptor mediates neurogenic inflammation and pain. Neuron. 2019 Feb 6;101(3):412-420.e3. doi: 10.1016/j.neuron.2019.01.012. Epub 2019 Jan 24.
Key words: mast-cell-specific receptor, inflammation, pain
https://www.ncbi.nlm.nih.gov/pubmed/30686732

3. Jayakumar RP, Madhav MS, Savelli F, Blair HT, Cowan NJ, Knierim JJ. Recalibration of path integration in hippocampal place cells. Nature 2019 Feb 11. doi: 10.1038/s41586-019-0939-3. [Epub ahead of print].
Key words: path integration, place cells
https://www.ncbi.nlm.nih.gov/pubmed/30742074

4. Sedlak TW, Paul BD, Parker GM, Hester LD, Snowman AM, Taniguchi Y, Kamiya A, Snyder SH, Sawa A. The glutathione cycle shapes synaptic glutamate activity. Proc Natl Acad Sci USA. 2019 Feb 12;116(7):2701-2706. doi: 10.1073/pnas.1817885116.
Key words: glutathione, synaptic, activity
https://www.ncbi.nlm.nih.gov/pubmed/30692251

1. Keiflin R, Pribut HJ, Shah NB, Janak PH. Ventral tegmental dopamine neurons participate in reward identity predictions. Curr Biol. 2019 Jan 7;29(1):93-103.e3. doi: 10.1016/j.cub.2018.11.050. Epub 2018 Dec 20.
Key words: dopamine, neurons, reward, identity
https://www.ncbi.nlm.nih.gov/pubmed/30581025

2. Lee BC, Tward DJ, Mitra PP, Miller MI. On variational solutions for whole brain serial-section histology using a Sobolev prior in the computational anatomy random orbit model. PLoS Comput Biol. 2018 Dec 26;14(12):e1006610. doi: 10.1371/journal.pcbi.1006610. eCollection 2018 Dec.
Key words: computational, anatomy, random, orbit
https://www.ncbi.nlm.nih.gov/pubmed/30586384

3. Lempel AA, Nielsen KJ. Ferrets as a model for higher-level visual motion processing.
Curr Biol. 2018 Dec 10. pii:S0960-9822(18)31483-0. doi: 10.1016/j.cub.2018.11.017. [Epub ahead of print].
Key words: ferrets, motion processing
https://www.ncbi.nlm.nih.gov/pubmed/30595516

4. Lilley BN, Sabbah S, Hunyara JL, Gribble KD, Al-Khindi T, Xiong J, Wu Z, Berson DM, Kolodkin AL. Genetic access to neurons in the accessory optic system reveals a role for Sema6A in midbrain circuitry mediating motion perception. J Comp Neurol. 2019 Jan 1;527(1):282-296. doi: 10.1002/cne.24507. Epub 2018 Nov 11.
Key words: accessory, optic, system, Sema6A
https://www.ncbi.nlm.nih.gov/pubmed/30076594

5. Meixiong J, Vasavda C, Green D, Zheng Q, Qi L, Kwatra SG, Hamilton JP, Snyder SH1 Dong X. Identification of a bilirubin receptor that may mediate a component of cholestatic itch. Elife. 2019 Jan 18;8.pii:e44116. doi: 10.7554/eLife.44116. [Epub ahead of print].
Key words: bilirubin, receptor, cholestatic, itch
https://www.ncbi.nlm.nih.gov/pubmed/30657454

6. Shah AP, Johnson MD, Fu X, Boersma GJ, Shah M, Wolfgang MJ, Tamashiro KL, Baraban JM. Deletion of Translin (Tsn) induces robust adiposity and hepatic steatosis without impairing glucose tolerance.
Int J Obes (Lond). 2019 Jan 15. doi: 10.1038/s41366-018-0315-7. [Epub ahead of print].
Key words: translin, glucose, tolerance
https://www.ncbi.nlm.nih.gov/pubmed/30647452

7. Spagnolo PA, Gómez Pérez LJ, Terraneo A, Gallimberti L, Bonci A. Neural correlates of cue- and stress-induced craving in gambling disorders: implications for transcranial magnetic stimulation interventions.
Eur J Neurosci. 2018 Dec 21. doi: 10.1111/ejn.14313. [Epub ahead of print].
Key words: gambling, disorders, transcranial, magnetic, stimulation
https://www.ncbi.nlm.nih.gov/pubmed/30575160

8. Wang Y, Cho C, Williams J, Smallwood PM, Zhang C, Junge HJ, Nathans J. Interplay of the Norrin and Wnt7a/Wnt7b signaling systems in blood-brain barrier and blood-retina barrier development and maintenance. Proc Natl Acad Sci USA. 2018 Dec 11;115(50):E11827-E11836. doi: 10.1073/pnas.1813217115. Epub 2018 Nov 26.
Key words: Norrin, Wnt7A, Wnt7b, blood, brain, barrier, maintenance
https://www.ncbi.nlm.nih.gov/pubmed/30478038

1. Kam TI, Mao X, Park H, Chou SC, Karuppagounder SS, Umanah GE, Yun SP, Brahmachari S, Panicker N, Chen R, Andrabi SA, Qi C, Poirier GG, Plenikova O, Troncoso JC, Bekris LM, Leverenz JB, Pantelyat A, Ko HS, Rosenthal LS, Dawson TM, Dawson VL. Poly(ADP-ribose) drives pathologic ?-synuclein
neurodegeneration in Parkinson's Disease. Science. 2018 Nov 2;362(6414). pii: eaat8407. doi: 10.1126/science.aat8407.
Key words: ?-synuclein neurodegeneration, Parkinson's disease
https://www.ncbi.nlm.nih.gov/pubmed/30385548

2. Miller SJ, Glatzer JC, Hsieh YC, Rothstein JD. Cortical astroglia undergo transcriptomic dysregulation in the G93A SOD1 ALS mouse model. J Neurogenet. 2018 Nov 6:1-14. doi: 10.1080/01677063.2018.1513408. [Epub ahead of print].
Key words: cortical astroglia, G93A SOD1 ALS
https://www.ncbi.nlm.nih.gov/pubmed/30398075

3. Peng X, Emiliani F, Smallwood PM, Rattner A, Lei H1, Sabbagh MF, Nathans J. Affinity capture of polyribosomes followed by RNAseq (ACAPseq), a discovery platform for protein-protein interactions.
Elife. 2018 Oct 22;7. pii: e40982. doi: 10.7554/eLife.40982.
Key words: affinity capture, RNAseq (ACAPseq)
https://www.ncbi.nlm.nih.gov/pubmed/30345971

4. Shen H, Marino RAM, McDevitt RA, Bi GH, Chen K, Madeo G, Lee PT, Liang Y, De Biase LM, Su TP, Xi ZX, Bonci A. Genetic deletion of vesicular glutamate transporter in dopamine neurons increases vulnerability to MPTP-induced neurotoxicity in mice.Proc Natl Acad Sci USA. 2018 Nov 15. pii: 201800886. doi: 10.1073/pnas.1800886115. [Epub ahead of print]
Key words: MPTP, neurotoxicity
https://www.ncbi.nlm.nih.gov/pubmed/30398075

5. Tang X, Ross CA, Johnson H3 Paulsen JS, Younes L, Albin RL, Ratnanather JT, Miller MI. Regional subcortical shape analysis in premanifest Huntington's disease. Hum Brain Mapp. 2018 Oct 30. doi: 10.1002/hbm.24456. [Epub ahead of print].
Key words: subcortical, shape, Huntington's
https://www.ncbi.nlm.nih.gov/pubmed/30376191

1. Edsinger E, Dölen G. A conserved role for serotonergic neurotransmission in mediating social behavior in octopus. Curr Biol 2018 Oct 8; 28(19):3136-3142.e4. doi: 10.1016/j.cub.2018.07.061. Epub 2018 Sep 20.
Key words: serotonergic, behavior, octopus
https://www.ncbi.nlm.nih.gov/pubmed/30245101

2. Jiang Z, Yu WWS, Chen L, Sheng Y, Yau KW. Cyclic-nucleotide- and HCN-channel-mediated phototransduction in intrinsically photosensitive retinal ganglion cells.
Cell. 2018 Oct 18;175(3):652-664.e12.
Key words: HCN, phototransduction, retinal ganglion cells
https://www.ncbi.nlm.nih.gov/pubmed/30270038

3. Ottenheimer D, Richard JM, Janak PH. Ventral pallidum encodes relative reward value earlier and more robustly than nucleus accumbens. Nat. Commun. 2018 Oct 19;9(1):4350. doi: 10.1038/s41467-018-06849-z.
Key words: pallidum, value, accumbens
https://www.ncbi.nlm.nih.gov/pubmed/30341305

4. Rodriguez G, Chakraborty D, Schrode KM, Saha R, Uribe I, Lauer AM, Lee HK. Cross-modal reinstatement of thalamocortical plasticity accelerates ocular dominance plasticity in adult mice. Cell Rep. 2018 Sep 25;24(13):3433-3440.e4. doi: 10.1016/j.celrep.2018.08.072.
Key words: cross-modal reinstatement, ocular, plasticity
https://www.ncbi.nlm.nih.gov/pubmed/30257205

5. Tabuchi M, Monaco JD, Duan G, Bell B, Liu S, Liu Q, Zhang K, Wu MN. Clock-generated temporal codes determine synaptic plasticity to control sleep.Ce ll. 2018 Sep 27. pii:S0092-8674(18)31228-5. doi: 10.1016/j.cell.2018.09.016. [Epub ahead of print].
Key words: temporal codes, plasticity, sleep
https://www.ncbi.nlm.nih.gov/pubmed/30318147

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October 2021 articles:
Essential Information for Human Subjects Research Teams Related to COVID-19
Third Thursdays with the ICTR Lecture Series - Community-Engaged Research Consultation Service
Coronavirus Research Billing Notices and FAQ
Managing Investigational Product Returns from Research Participants
Update to Organization Policy on Registration of Clinical Trials
Changes in HSR Recertification
Update on Insurance and Research Participant Financial Responsibility Information Sheet: Signature No Longer Required
Change in JHM IRB Review Fees for Commercially-Funded Studies
Data and Safety Monitoring Board Training Manual Now Available
Good Clinical Practice (GCP) Fundamentals: Understanding and Applying GCP to Human Subject Research
Fee Schedule Adjustment for Hospital Services Charged to Clinical Trial Budgets
Changes to NIH-funded Human Subjects Research
Free Resources for Longitudinal Clinical Research Studies
JHM IRB Reliance Requests
Sharing Partnership for Innovative Research in Translation
Johns Hopkins Institute for Clinical and Translational Research
Johns Hopkins Clinical Research Network
 
Visit Animal Care and Use Committee Website
Current Classes
"Interinstitutional Assurance" Agreement
Health, Safety, and Environment (HSE) presents: Safety in Research Updates
Register, Revisit, Review, Renew Safety Protocols and Procedures
Johns Hopkins 2021-22 Flu Campaign
Johns Hopkins Occupational Health Services
Dual Use Research of Concern (DURC) policies
COVID-19 Funding Opportunities
The Fisher Center Discovery Program
Michael J. Fox Foundation (MJFF) Challenge
Updated Guidance from NIH on COVID-19 Flexibilities for Applicants and Recipients
COVID-19 and Research Updates
Point of Contact for NIH Loan Repayment Program
JHU SOM Update on NIH Policy on Foreign Involvement
Disclosure of Payments from Foreign Educational Institutions and Government Agencies
Institutional Letter of Support Required for Institutional Training Grant Applications
NIH Policy on Foreign Component Involvement
NIH Policy: Foreign Components Added to a Grant to a Domestic or Foreign Organization

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