May 2013
PUBLICATIONS - Back

Ophthalmology Archives

1. Burkholder BM, Srikumaran D, Nanji A, Lee B, Weinberg RS. Inadvertent trypan blue posterior capsule staining during cataract surgery. Amer J Ophthalmol. 2013 Apr; 155(4): 625-628.
Key words: cataract, tryptan blue

http://www.ncbi.nlm.nih.gov/pubmed/23219064

1. Althoff KN, Buchacz K, Hall HI, Zhang J, Hanna DB, Rebeiro P, Gange SJ, Moore RD, Kitahata MM, Gebo KA, Martin J, Justice AC, Horberg MA, Hogg RS, Sterling TR, Cescon A, Klein MB, Thorne JE, Crane HM, Mugavero MJ, Napravnik S, Kirk GD, Jacobson LP, Brooks JT; North American AIDS Cohort Collaboration on Research and Design. U.S. trends in antiretroviral therapy use, HIV RNA plasma viral loads, and CD4 T-lymphocyte cell counts among HIV-infected persons, 2000 to 2008. Ann Intern Med. 2012 Sep 4;157(5):325-35.
Key words: antiretroviral therapy, HIV, RNA, lymphocytes
http://www.ncbi.nlm.nih.gov/pubmed/22944874

2. Butler NJ, Thorne JE. Current status of HIV infection and ocular disease. Curr Opin Ophthalmol. 2012 Nov;23(6):517-22. doi: 10.1097/ICU.0b013e328358ba85.
Key words: HIV infection, ocular disease
http://www.ncbi.nlm.nih.gov/pubmed/23047168

3. Daniel E, Pistilli M, Pujari SS, Kaçmaz RO, Nussenblatt RB, Rosenbaum JT, Suhler EB, Thorne JE, Foster CS, Jabs DA, Levy-Clarke GA, Kempen JH. Risk of hypotony in noninfectious uveitis. Ophthalmology. 2012 Nov;119(11):2377-85. doi: 10.1016/j.ophtha.2012.05.032. Epub 2012 Jul 13.
Key words: hypotony, uveitis
http://www.ncbi.nlm.nih.gov/pubmed/22796306

4. Gangaputra S, Drye L, Vaidya V, Thorne JE, Jabs DA, Lyon AT; Studies of the Ocular Complications of AIDS (SOCA) Research Group. Non-cytomegalovirus ocular opportunistic infections in patients with AIDS. Am J Ophthalmol. 2012 Oct 12. doi:pii: S0002-9394(12)00516-8. 10.1016/j.ajo.2012.07.019. [Epub ahead of print]
Key words: non-cytomegalovirus infections, AIDS, ocular opportunistic infections
http://www.ncbi.nlm.nih.gov/pubmed/23068916

5. Gregory AC 2nd, Kempen JH, Daniel E, Kaçmaz RO, Foster CS, Jabs DA, Levy-Clarke GA, Nussenblatt RB, Rosenbaum JT, Suhler EB, Thorne JE; Systemic Immunosuppressive Therapy for Eye Diseases Cohort Study Research Group. Risk factors for loss of visual acuity among patients with uveitis associated with juvenile idiopathic arthritis: The Systemic Immunosuppressive Therapy for Eye Diseases Study. Ophthalmology. 2012 Oct 11. doi:pii: S0161-6420(12)00687-2. 10.1016/j.ophtha.2012.07.052. [Epub ahead of print]
Key words: visual acuity, uveitis, juvenile idiopathic arthritis, eye diseases
http://www.ncbi.nlm.nih.gov/pubmed/23062650

6. Kozak I, Ahuja A, Gangaputra S, Van Natta ML, Thorne JE, Freeman WR. Optic nerve head morphology and visual field function in patients with AIDS and without infectious retinitis. Ocul Immunol Inflamm. 2012 Oct;20(5):342-8. doi: 10.3109/09273948.2012.694552. Epub 2012 Jun 14.
Key words: optic nerve, visual field function, AIDS, infectious retinitis
http://www.ncbi.nlm.nih.gov/pubmed/22697270

1. Bhutto I, Lutty GA. Understanding age-related macular degeneration (AMD): Relationships between the photoreceptor/retinal pigment epithelium/Bruch's membrane/choriocapillaris complex. Molecular Aspects of Medicine 2012;33:295-317.
Key words: retinal pigment epithelium, Bruch's membrane, choriocapillaris complex
No PMID available

2. Geruschat DR, Bittner AK, Dagnelie G. Orientation and mobility assessment in retinal prosthetic clinical trials. Optom Vis Sci. 2012 Sep;89(9):1308-15.
Key words: prosthetic vision, orientation and mobility, low vision, retinal chip implant, low-vision rehabilitation
http://www.ncbi.nlm.nih.gov/pubmed/22902422

3. Padula W, Singman E, Vicci V, Munitz R, Magrun WM. Evaluating and Treating Visual Dysfunction. Chapter 45 in Brain Injury Medicine, 2nd Ed. Demos Medical Publishing. 2012.

4. Shao H, Lee S, Gae-Scott S, Nakata C, Chen S, Hamad AR, Chakravarti S. Extracellular matrix lumican promotes bacterial phagocytosis and Lum-/- mice show increased Pseudomonas aeruginosa lung infection severity. J Biol Chem. 2012 Oct 19;287(43):35860-72.
http://www.ncbi.nlm.nih.gov/pubmed/22865855

1. Goldstein JE, Massof RW, Deremeik JT, Braudway S, Jackson ML, Kehler KB, Primo SA, Sunness JS, Low Vision Research Network Study Group. Baseline traits of low vision patients served by private outpatient clinical centers in the United States. Arch Ophthalmol 2012 Aug 1;130(8):1028-1037.
http://www.ncbi.nlm.nih.gov/pubmed/22893074

1. Butler NJ, Furtado JM, Winthrop KL, Smith JR. Ocular toxoplasmosis II: clinical features, pathology and management. Clin Experiment Ophthalmol. 2012 Jun 19. doi: 10.1111/j.1442-9071.2012.02838.x. [Epub ahead of print]
Key words: Ocular Toxoplasmosis, pathology
http://www.ncbi.nlm.nih.gov/pubmed/22712598

1. Kozak I, Ahuja A, Gangaputra S, Van Natta ML, Thorne JE, Freeman WR. Optic nerve head morphology and visual field function in patients with AIDS and without infectious retinitis. Ocul Immunol Inflamm. 2012 Jun 14. [Epub ahead of print]
Key words: AIDS, optic nerve findings, visual fiend measurements, visual function
http://www.ncbi.nlm.nih.gov/pubmed/22697270

2. Sugar EA, Jabs DA, Ahuja A, Thorne JE, Danis RP, Meinert CL; Studies of the Ocular Complications of AIDS Research Group. Incidence of cytomegalovirus retinitis in the era of highly active antiretroviral therapy. Am J Ophthalmol. 2012 Jun;153(6):1016-24.e5.
Key words: CMV retinitis, AIDS, incidence
http://www.ncbi.nlm.nih.gov/pubmed/22790073

1. Butler NJ, Suhler EB, Rosenbaum JT. Interferon alpha 2b in the treatment of uveitic cystoid macular edema. Ocul Immunol Inflamm. 2012 Apr;20(2):86-90.
Key words: interferon alpha 2b, macular edema
http://www.ncbi.nlm.nih.gov/pubmed/22409560

2. Charkoudian LD, Ying GS, Pujari SS, Gangaputra S, Thorne JE, Foster CS, Jabs DA, Levy-Clarke GA, Nussenblatt RB, Rosenbaum JT, Suhler EB, Kempen JH. High-dose intravenous corticosteroids for ocular inflammatory diseases. Ocul Immunol Inflamm. 2012 Apr;20(2):91-9.
Key words: intravenous corticosteroid therapy, ocular inflammatory disease, uveitis, treatment outcomes
http://www.ncbi.nlm.nih.gov/pubmed/22409561

3. Frick KD, Drye LT, Kempen JH, Dunn JP, Holland GN, Latkany P, Rao NA, Sen HN, Sugar EA, Thorne JE, Wang RC, Holbrook JT. Associations among visual acuity and vision- and health-related quality of life among patients in the multicenter uveitis steroid treatment trial. Multicenter Uveitis Steroid Treatment-MUST Trial Research Group. Invest Ophthalmol Vis Sci. 2012 Mar 9;53(3):1169-76. Print 2012.
Key words: quality of life measures, MUST Trial; uveitis
http://www.ncbi.nlm.nih.gov/pubmed/22247489

4. Gangaputra S, Kalyani PS, Fawzi AA, Van Natta ML, Hubbard LD, Danis RP, Thorne JE, Holland GN
Retinal vessel caliber among people with acquired immunodeficiency syndrome: relationships with disease-associated factors and mortality. Studies of the Ocular Complications of AIDS Research Group.
Am J Ophthalmol. 2012 Mar;153(3):434-444.e1.
Key words: AIDS, retinal blood vessel caliber, mortality
http://www.ncbi.nlm.nih.gov/pubmed/22019225

5. Kalyani PS, Fawzi AA, Gangaputra S, van Natta ML, Hubbard LD, Danis RP, Thorne JE, Holland GN
Retinal vessel caliber among people with acquired immunodeficiency syndrome: relationships with visual function. Studies of the Ocular Complications of AIDS Research Group. Am J Ophthalmol. 2012 Mar;153(3):428-433.e1.
Key words: AIDS, retinal blood vessel caliber, visual acuity
http://www.ncbi.nlm.nih.gov/pubmed/22019221

6. Oktavec KC, Nolan K, Brown DM, Dunn JP, Livingston AG, Thorne JE. Clinical outcomes in patients with cytomegalovirus retinitis treated with ganciclovir implant. Am J Ophthalmol. 2012 Apr;153(4):728-733.e2.
Key words: CMV retinitis, AIDS, ganciclovir implant, treatment outcomes
http://www.ncbi.nlm.nih.gov/pubmed/22265144

7. Sinha D, Valapala M, Bhutto I, Patek B, Zhang C, Hose S, Yang F, Cano M, Stark WJ, Lutty GA, Zigler JS, Wawrousek EF. ?A3/A1-crystallin is required for proper astrocyte template formation and vascular remodeling in the retina. Transgenic Res. 2012 Mar 17 [Epub ahead of print].
Key words: A3/A1-crystallin, Astrocyte, Retina, Transgenic mice, Hyaloid and retinal vasculature http://www.ncbi.nlm.nih.gov/pubmed/22427112

8. Sugar EA, Jabs DA, Ahuja A, Thorne JE, Danis RP, Meinert CL. Incidence of cytomegalovirus retinitis in the era of highly active antiretroviral therapy. Am J Ophthalmol. 2012 Feb 4.
Key words: CMV retinitis, AIDS, antiretroviral therapy, disease incidence
http://www.ncbi.nlm.nih.gov/pubmed?term=22310076

9. Udoetuk JD, Dai Y, Ying GS, Daniel E, Gangaputra S, Rosenbaum JT, Suhler EB, Thorne JE, Foster CS, Jabs DA, Levy-Clarke GA, Nussenblatt RB, Kempen JH. Risk of corticosteroid-induced hyperglycemia requiring medical therapy among patients with inflammatory eye diseases. Systemic Immunosuppressive Therapy for Eye Diseases Cohort Study Research Group*. Ophthalmology. 2012 Apr 6 [Epub ahead of print].
Key words: Corticosteroid therapy, prednisone, hyperglycemia, diabetes
http://www.ncbi.nlm.nih.gov/pubmed/22484116

1. Bittner AK, Haythornthwaite JA, Diener-West, M, Dagnelie G. Photopsias are related in part to perceived stress and positive mood in retinitis pigmentosa. Eye. 2011; Oct 14. doi: 10.1038/eye.2011.247.
Key words: photopsias, phosphenes, flashes, stress, affect, mood, retinitis pigmentosa
http://www.ncbi.nlm.nih.gov/pubmed/21997359

2. Bittner AK, Ibrahim MA, Haythornthwaite JA, Diener-West, M, Dagnelie G. Vision test variability in retinitis pigmentosa and psychosocial factors. Optom Vis Sci. 2011 Dec; 88(12):1496-506.
Key words: retinitis pigmentosa, variablity, fluctuation, visual field, psychosocial, depression
http://www.ncbi.nlm.nih.gov/pubmed/21946786

3. Bittner AK, Iftikhar MH, Dagnelie G. Test-retest, within-visit variability of Goldmann visual fields in retinitis pigmentosa. Invest Ophthalmol Vis Sci. 2011; Oct 11;52(11):8042-6.
Key words: retinitis pigmentosa, visual field, variability, repeatability, reliability, test-retest
http://www.ncbi.nlm.nih.gov/pubmed/21896857

4. Bittner AK, Jeter PE, Dagnelie G. Grating acuity and contrast tests for clinical trials of severe vision loss. Optom Vis Sci. 2011 Oct; 88(10):1153-63.
Key words: visual acuity, contrast sensitivity, grating, reliability, variability, low vision
http://www.ncbi.nlm.nih.gov/pubmed/21747309

5. Ma B, Sen T, Asnaghi L, Valapala M, Yang F, Hose S, McLeod DS, Lu Y, Eberhart C, Zigler JS Jr, Sinha D. ?A3/A1-Crystallin controls anoikis-mediated cell death in astrocytes by modulating PI3K/AKT/mTOR and ERK survival pathways through the PKD/Bit1-signaling axis. Cell Death Dis. 2011 Oct 13;2:e217. doi: 10.1038/cddis.2011.100.
Key words: anoikis; astrocytes; ?A3/A1-crystallin; lens denucleation; PI3K/AKT/mTOR and
ERK pathways
http://www.ncbi.nlm.nih.gov/pubmed/21993393

1. Boland MV, McCoy AN, Quigley HA, Miller NR, Subramanian PS, Ramulu PY, Murakami P, Danesh-Meyer HV. Evaluation of an algorithm for detecting visual field defects due to chiasmal and post-chiasmal lesions: the Neurological Hemifield Test. Invest Ophthalmol Vis Sci. 2011 Sep 6. [Epub ahead of print]
Key words: visual field defect, chiasmal lesions
http://www.ncbi.nlm.nih.gov/pubmed/21896843

2. Delalande A, Bouakaz A, Renault G, Tabareau F, Kotopoulis S, Midoux P, Arbeille B, Uzbekov R, Chakravarti S, Postema M, Pichon C. Ultrasound and microbubbles assisted gene delivery in Achilles tendons: Long lasting gene expression and restoration of fibromodulin KO phenotype. J Control Release. 2011 Aug 23. [Epub ahead of print]
Key words: microbubbles, gene delivery, Achilles tendon, fibromodulin KO
http://www.ncbi.nlm.nih.gov/pubmed/21888933

3. Matta NS, Arnold RW, Singman EL, Silbert DI. Can a photoscreener help us remotely evaluate and manage amblyopia? Am Orthopt J. 2011;61:124-7.
Key words: Telemedicine, amblyopia, photoscreener
http://www.ncbi.nlm.nih.gov/pubmed/21856880

4. Shao H, Chaerkady R, Chen S, Pinto SM, Sharma R, Delanghe B, Birk DE, Pandey A, Chakravarti S. Proteome profiling of wild type and lumican-deficient mouse corneas. J Proteomics. 2011 Sep 6;74(10):1895-905. Epub 2011 May 17.
Key words: proteome, lumican, corneas, mouse
http://www.ncbi.nlm.nih.gov/pubmed/21616181

5. Singman EL, Matta NS, Silbert DI. Use of the cogan lid twitch to identify myasthenia gravis. J Neuroophthalmol. 2011 Sep;31(3):239-40.
Key words: Myasthenia, Cogan, eyelid
http://www.ncbi.nlm.nih.gov/pubmed/21654336

6. Sunshine JC, Akanda MI, Li D, Kozielski KL, Green JJ. Effects of base polymer hydrophobicity and end-group modification on polymeric gene delivery. Biomacromolecules. 2011 Sep 9. [Epub ahead of print]
Key words: gene delivery, polymer, library, nanoparticle
http://www.ncbi.nlm.nih.gov/pubmed/21888340

7. Tzeng SY, Guerrero-Cázares H, Martinez EE, Sunshine JC, Quiñones-Hinojosa A, Green JJ. Non-viral gene delivery nanoparticles based on poly(?-amino esters) for treatment of glioblastoma.
Biomaterials. 2011 Aug;32(23):5402-10.
Key words: gene delivery, polymer, nanoparticle, glioblastoma
http://www.ncbi.nlm.nih.gov/pubmed/21536325

8. Vuorimaa E, Ketola TM, Green JJ, Hanzlíková M, Lemmetyinen H, Langer R, Anderson DG, Urtti A, Yliperttula M. Poly(?-amino ester)-DNA complexes: Time-resolved fluorescence and cellular transfection studies. J Control Release. 2011;154(2):171-6.
Key words: polymer, DNA, biophysical
http://www.ncbi.nlm.nih.gov/pubmed/21699928

9. Xiao Z, Mohamood AS, Uddin S, Gutfreund R, Nakata C, Marshall A, Kimura H, Caturegli P, Womer KL, Huang Y, Jie C, Chakravarti S, Schneck JP, Yagita H, Hamad AR. Inhibition of Fas Ligand in NOD Mice Unmasks a Protective Role for IL-10 against insulitis development. Am J Pathol. 2011 Aug;179(2):725-32.
http://www.ncbi.nlm.nih.gov/pubmed/21718680

1. Lohr K, Sardana H, Lee S, Wu F, Huso DL, Hamad AR, Chakravarti S. Extracellular matrix protein lumican regulates inflammation in a mouse model of colitis. Inflamm Bowel Dis. 2011 Apr 11. doi: 10.1002/ibd.21713. [Epub ahead of print]
Key words: extracellular matrix, lumican, TLR4, CD14, innate immune response, inflammation, murine colitis, neutrophils, tri-nitrobenzene sulfonic acid, dextran sodium sulfate
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=
PubMed&dopt=Citation&list_uids=21484968

2. Shao H, Chaerkady R, Chen S, Pinto SM, Sharma R, Delanghe B, Birk DE, Pandey A, Chakravarti S. Proteome profiling of wild type and lumican-deficient mouse corneas. J Proteomics. 2011 May 17. [Epub ahead of print]
Key words: Proteomics, Lumican, Mass spectrometry, iTRAQ, Cornea, Collagen
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=
PubMed&dopt=Citation&list_uids=21616181

1. Engler, C, Chakravarti, S., Doyle J, Eberhart CG, Meng H, Stark WJ, Kelliher C, Jun, AS. TGF ? Signaling Pathway Activation in Keratoconus. American J. Ophthal. 2011 Feb 8. [Epub ahead of print].
Key words: keratoconus, corneal disease, extracellular matrix, TGF beta
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6VK5-526MY7G-
C&_user=75682&_coverDate=02%2F18%2F2011&_rdoc=1&_fmt=high&_orig=
gateway&_origin=gateway&_sort=d&_docanchor=&view=c&_acct=C000006078
&_version=1&_urlVersion=0&_userid=75682&md5=d5965fb776dcfb1fd9fcf373f81
fee38&searchtype=a
PMID:21310385

2. Jun AS, Cope L, Speck S, Feng, X, Lee, S, Meng H, Hamad, AR, Chakravarti S. Subnormal cytokine profile in the tear fluid of keratoconus patients. PLoS ONE. 2011 Jan 27;6(1):e16437.
Key words: keratoconus, corneal disease, extracellular matrix, TGF beta, tear film, cytokines
http://www.ncbi.nlm.nih.gov/pubmed/21298010

3. Orr P, Rentz AM, Margolis MK, Revicki DA, Dolan CM, Colman S, Fine JJ, Bressler NM. Validation of the National Eye Institute Visual Function Questionnaire-25 (NEI VFQ-25) in age-related macular degeneration. Invest Ophthalmol Vis Sci 2011, January 31 [Epub ahead of print].
Key words : macular degeneration, visual function
http://www.ncbi.nlm.nih.gov/pubmed/21282568

4. Zhong X, Huang H, Shen J-K, Zacchigna S, Zentilin L, Giacca M, Vinores SA. Vascular endothelial growth factor-B gene transfer exacerbates retinal and choroidal neovascularization and vasopermeability without promoting inflammation. Mol Vision. 2011;17:492-507.
Key words: VEGF-B, gene transfer, neovascularization, blood-retinal barrier, AAV vector http://www.molvis.org/molvis/v17/a57/
PMID: 21364963

5. Zigler JS Jr, Zhang C, Grebe R, Sehrawat G, Hackler L Jr, Adhya S, Hose S, McLeod DS, Bhutto I, Barbour W, Parthasarathy G, Zack DJ, Sergeev Y, Lutty GA, Handa JT, Sinha D. Mutation in the betaA3/A1-crystallin gene impairs phagosome degradation in the retinal pigmented epithelium of the rat. J Cell Sci. 2011; 124: 523-531.
Key words: betaA3/A1-crystallin, retinal pigmented epithelium (RPE), photoreceptor outer segment discs, phagocytosis, autophagy
http://www.ncbi.nlm.nih.gov/pubmed/21266465

1. Huang H, Vasilakis P, Zhong X, Shen JK, Geronatsiou K, Papadaki H, Maragoudakis ME, Gartaganis SP, Vinores SA, Tsopanoglou NE. Parstatin suppresses ocular neovascularization and inflammation. Invest Ophthalmol Vis Sci. 2010 Nov;51(11):5825-32.
Key words: choroidal neovascularization, retinal neovascularization, corneal neovascularization, retinal leukostasis, corneal inflammation
http://www.ncbi.nlm.nih.gov/pubmed/20538980

1. Huang H, Vasilakis P, Zhong X, Shen JK, Geronatsiou K, Papadaki H, Maragoudakis ME, Gartaganis SP, Vinores SA, Tsopanoglou NE. Parstatin suppresses ocular neovascularization and inflammation. Invest. Ophthalmol. Vis. Sci. 2010 Nov;51(11):5825-32.
Key words: choroidal neovascularization, retinal neovascularization, leukostasis, corneal neovascularization
http://www.iovs.org/content/51/11/5825.full.pdf+html
PMID: 20538980

1. Kim SJ, Toma HS, Thirkill CE, Dunn JP. Cancer-associated retinopathy with retinal periphlebitis in a patient with ovarian cancer. Ocul Immonol Inflamm 2010 April; 18: 107-109
Key words: cancer-associated retinopathy, ovarian cancer, paraneoplastic syndrome, periphlebitis, vasculitis
PMID: 20370338

2. Thorne JE, Woreta FA, Dunn JP, Jabs DA. Risk of cataract development among children with juvenile idiopathic arthiritis-related uveitis treated with topical corticosteroids. Ophthalmology. 2010 April 2 [Epub ahead of print].
Key words: risk factors for cataract, uveitis, juvenile idiopathic arthritis, topical corticosteroids
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6VT2-4YS6P6C-
3&_user=75682&_coverDate=04%2F03%2F2010&_rdoc=1&_fmt=high&_orig=
search&_sort=d&_docanchor=&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=20fd5b81781a7b6cd05f82211806cc21
PMID: 20363502

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