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July 2008
PUBLICATIONS - Back

Biomedical Engineering Archives

1. Appel LJ, Wright JT Jr, Greene T, Kusek JW, Lewis JB, Wang X, Lipkowitz MS,
Norris KC, Bakris GL, Rahman M, Contreras G, Rostand SG, Kopple JD, Gabbai FB,
Schulman GI, Gassman JJ, Charleston J, Agodoa LY; for the African American Study
of Kidney Disease and Hypertension Collaborative Research Group.
Long-term effects of renin-angiotensin system-blocking therapy and a low blood
pressure goal on progression of hypertensive chronic kidney disease in African
Americans. Arch Intern Med. 2008 Apr 28;168(8):832-839.
http://www.ncbi.nlm.nih.gov/pubmed/18443258?ordinalpos=1&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

1. Reichl EM, Ren Y, Morphew MK, Delannoy M, Effler JC, Girard KD, Divi S,
Iglesias PA, Kuo SC, Robinson DN. Interactions between myosin and actin crosslinkers control cytokinesis contractility dynamics and mechanics. Curr Biol. 2008 Apr 8;18(7):471-80. Epub 2008 Mar 27.
Key words: myosin, actin, cytokinesis
http://www.ncbi.nlm.nih.gov/pubmed/18372178?ordinalpos=1&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

2. Sadagopan S, Wang X. Level invariant representation of sounds by populations of neurons in primary auditory cortex. J Neurosci. 2008 Mar 26;28(13):3415-26.
Key words: neurons, sounds, primary auditory cortex
http://www.ncbi.nlm.nih.gov/pubmed/18367608?ordinalpos=2&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

1. Bader JS. Systems approaches for pharmacogenetics and pharmacogenomics.
Pharmacogenomics. 2008 Mar;9(3):257-62.
Key words: pharmacogenetics, pharmacogenomics
http://www.ncbi.nlm.nih.gov/pubmed/18303961?ordinalpos=1&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

2. Cheong R, Levchenko A. Wires in the soup: quantitative models of cell signaling.
Trends Cell Biol. 2008 Feb 19; [Epub ahead of print]
Key words: cell signaling
http://www.ncbi.nlm.nih.gov/pubmed/18291655?ordinalpos=1&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

3. Cysyk J, Tung L. Electric field perturbations of spiral waves attached to millimeter-size obstacles. Biophys J. 2008 Feb 15;94(4):1533-41.
Key words: spiral waves, electric field
http://www.ncbi.nlm.nih.gov/pubmed/17921205?ordinalpos=1&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

4. Karagiannis ED, Popel AS. Novel anti-angiogenic peptides derived from ELR-containing CXC chemokines. J Cell Biochem. 2008 Feb 28 [Epub ahead of print].
Key words: anti-angiogenic peptides, ELR, chemokines
http://www.ncbi.nlm.nih.gov/pubmed/18307172?ordinalpos=1&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

5. Liu Z, Wang X, Yu Y, Li X, Wang T, Jiang H, Ren Q, Jiao Y, Sawa A, Moran T, Ross CA, Montell C, Smith WW. A Drosophila model for LRRK2-linked Parkinsonism. Proc Natl Acad Sci U S A. 2008 Feb 19;105(7):2693-8. Epub 2008 Feb 7.
Key words: Drosophila, Parkinsonism, LRRK2
http://www.ncbi.nlm.nih.gov/pubmed/18258746?ordinalpos=1&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

6. Shadmehr R, Krakauer JW. A computational neuroanatomy for motor control.
Exp Brain Res. 2008 Mar;185(3):359-81. Epub 2008 Feb 5.
Key words: neuroanatomy, motor control
http://www.ncbi.nlm.nih.gov/pubmed/18251019?ordinalpos=1&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

1. Joanne Wang C, Li X, Lin B, Shim S, Ming GL, Levchenko A. A microfluidics-based turning assay reveals complex growth cone responses to integrated gradients of substrate-bound ECM molecules and diffusible guidance cues. Lab Chip. 2008 Feb;8(2):227-37. Epub 2008 Jan 4.
Key words: microfluidics, growth cone, ECM molecules
http://www.ncbi.nlm.nih.gov/pubmed/18231660?ordinalpos=5&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

2. Kaneda A, Wang CJ, Cheong R, Timp W, Onyango P, Wen B, Iacobuzio-Donahue CA,
Ohlsson R, Andraos R, Pearson MA, Sharov AA, Longo DL, Ko MS, Levchenko A,
Feinberg AP. Enhanced sensitivity to IGF-II signaling links loss of imprinting of IGF2 to
increased cell proliferation and tumor risk. Proc Natl Acad Sci U S A. 2007 Dec 26;104(52):20926-31. Epub 2007 Dec 17.
Key words: IGF-II, loss of imprinting, cell proliferation, tumor
http://www.ncbi.nlm.nih.gov/pubmed/18087038?ordinalpos=5&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

3. Lin JW, Garber L, Qi YR, Chang MG, Cysyk J, Tung L. Reion of slowed conduction acts as core for spiral wave reentry in cardiac cell monolayers. Am J Physiol Heart Circ Physiol. 2008 Jan;294(1):H58-65.
Key words: cardiac cell, spiral wave reentry
http://www.ncbi.nlm.nih.gov/pubmed/17965287?ordinalpos=5&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

4. McGaughey DM, Vinton RM, Huynh J, Al-Saif A, Beer MA, McCallion AS. Metrics of sequence constraint overlook regulatory sequences in an exhaustive analysis at phox2b. Genome Res. 2008 Feb;18(2):252-60. Epub 2007 Dec 10.
Key words: regulatory sequence, phox2b
http://www.ncbi.nlm.nih.gov/pubmed/18071029?ordinalpos=5&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

5. Mori S, Oishi K, Jiang H, Jiang L, Li X, Akhter K, Hua K, Faria AV, Mahmood A,
Woods R, Toga AW, Pike GB, Neto PR, Evans A, Zhang J, Huang H, Miller MI, van
Zijl P, Mazziotta J. Stereotaxic white matter atlas based on diffusion tensor imaging in an ICBM
template. Neuroimage. 2008 Jan 3; [Epub ahead of print]
Key words: white matter, ICBM
http://www.ncbi.nlm.nih.gov/pubmed/18255316?ordinalpos=5&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

6. Varghese S, Hwang NS, Canver AC, Theprungsirikul P, Lin DW, Elisseeff J. Chondroitin sulfate based niches for chondrogenic differentiation of mesenchymal stem cells.
Matrix Biol. 2008 Jan;27(1):12-21.
Key words: chondroitin, mesenchymal stem cells
http://www.ncbi.nlm.nih.gov/pubmed/17689060?ordinalpos=5&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

7. Vempati P, Karagiannis ED, Popel AS. A biochemical model of matrix metalloproteinase 9 activation and inhibition. J Biol Chem. 2007 Dec 28;282(52):37585-96.
Key words: matrix metalloproteinase 9, biochemical
http://www.ncbi.nlm.nih.gov/pubmed/17848556?ordinalpos=5&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

1. Bandyopadhyay S, Reiss LA, Young ED. Receptive field for dorsal cochlear nucleus neurons at multiple sound levels. J Neurophysiol. 2007 Dec;98(6):3505-15.
Key words: dorsal, cochlear neurons, sound levels
http://www.ncbi.nlm.nih.gov/pubmed/17898144?ordinalpos=5&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

2. Hadipour-Niktarash A, Lee CK, Desmond JE, Shadmehr R. Impairment of retention but not acquisition of a visuomotor skill through time-dependent disruption of primary motor cortex.
J Neurosci. 2007 Dec 5;27(49):13413-9.
Key words: visuomotor skills, primary motor cortex, impairment
http://www.ncbi.nlm.nih.gov/pubmed/18057199?ordinalpos=3&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

3. Ji JW, Mac Gabhann F, Popel AS. Skeletal muscle VEGF gradients in peripheral arterial disease:
simulations of rest and exercise. Am J Physiol Heart Circ Physiol. 2007 Dec;293(6):H3740-9.
Key words: VEGF, skeletal muscle, peripheral arterial disease, exercise
http://www.ncbi.nlm.nih.gov/pubmed/17890434?ordinalpos=6&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

4. Kaneda A, Wang CJ, Cheong R, Timp W, Onyango P, Wen B, Iacobuzio-
Donahue CA, Ohlsson R, Andraos R, Pearson MA, Sharov AA, Longo DL, Ko MS,
Levchenko A, Feinberg AP. Enhanced sensitivity to IGF-II signaling links loss of imprinting of
IGF2 to increased cell proliferation and tumor risk. Proc Natl Acad Sci U S A. 2007 Dec 26;104(52):20926-31. Epub 2007 Dec 17.
Key words: IGF-II, cell proliferation, loss of imprinting, tumor
http://www.ncbi.nlm.nih.gov/pubmed/18087038?ordinalpos=1&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

5. Li X, Wang LX, Wang X, Roseman S. The chitin catabolic cascade in the marine bacterium Vibrio cholerae: characterization of a unique chitin oligosaccharide deacetylase.
Glycobiology. 2007 Dec;17(12):1377-87.
Key words: chitin, catabolic cascade, marine bacteria, oligosaccharide deacetylase
http://www.ncbi.nlm.nih.gov/pubmed/17884842?ordinalpos=7&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

6. McGaughey DM, Vinton RM, Huynh J, Al-Saif A, Beer MA, McCallion AS. Metrics of sequence constraint overlook regulatory sequences in an exhaustive analysis at phox2b.
Genome Res. 2007 Dec 10; [Epub ahead of print]
Key words: regulatory sequence, phox2b, metrics
http://www.ncbi.nlm.nih.gov/pubmed/18071029?ordinalpos=2&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

7. Tay LH, Griesbeck O, Yue DT. Live-cell transforms between Ca2+ transients and FRET responses for a troponin-C-based Ca2+ sensor. Biophys J. 2007 Dec 1;93(11):4031-40.
Key words: Ca2+, FRET, troponin-C
http://www.ncbi.nlm.nih.gov/pubmed/17704158?ordinalpos=9&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

8. Vempati P, Karagiannis ED, Popel AS. A biochemical model of matrix metalloproteinase 9 activation and inhibition. J Biol Chem. 2007 Dec 28;282(52):37585-96.
Key words: biochemistry, metalloproteinase 9
http://www.ncbi.nlm.nih.gov/pubmed/17848556?ordinalpos=8&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

9. Wang X. A sharper view from the top. Nat Neurosci. 2007 Dec;10(12):1509-10.
http://www.ncbi.nlm.nih.gov/pubmed/18043585?ordinalpos=4&itool=EntrezSystem2.
PEntrez.Pubmed.Pubmed_ResultsPanel.Pubmed_RVDocSum

1. Bian W, Tung L. Structure-related initiation of reentry by rapid pacing in monolayers of cardiac cells. Circ Res. 2006 Mar 3;98(4):e29-38. Epub 2006 Feb 9.
Key word: zigzag
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=16469953

2. Gandhi TK, Zhong J, Mathivanan S, Karthick L, Chandrika KN, Mohan SS, Sharma S, Pinkert S, Nagaraju S, Periaswamy B, Mishra G, Nandakumar K, Shen B, Deshpande N, Nayak R, Sarker M, Boeke JD, Parmigiani G, Schultz J, Bader JS, Pandey A. Analysis of the human protein interactome and comparison with yeast, worm and fly interaction datasets Nat Genet. 2006 Mar;38(3):285-93.
Key words: proteome, cellular, genetic disorder, human, protein
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=16501559

3. Girard KD, Kuo SC, Robinson DN. Dictyostelium myosin II mechanochemistry promotes active behavior of the cortex on long time scales. Proc Natl Acad Sci U S A. 2006 Feb 14;103(7):2103-8. Epub 2006 Feb 3.
Key words: cell, probe, cortex
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=16461463

4. Hwang EJ, Smith MA, Shadmehr R. Dissociable effects of the implicit and explicit memory systems on learning control of reaching. Exp Brain Res. 2006 Feb 28; [Epub ahead of print]
Key words: visual, correlation, proprioception
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=16506003

5. Jimenez D, Diaz G, Marin E, Vidal R, Sueiro A, Yusen RD. The risk of recurrent venous thromboembolism in patients with unprovoked symptomatic deep vein thrombosis and asymptomatic pulmonary embolism. Thromb Haemost. 2006 Mar;95(3):562-566.
Key words: pulmonary, embolism, extremity, symptomatic
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=1652558

6. Koenig MA, Kaplan PW, Thakor NV. Clinical neurophysiologic monitoring and brain injury from cardiac arrest. Neurol Clin. 2006 Feb;24(1):89-106.
Key words: neurophysiologic monitoring, brain injury, cardiac arrest
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=16443132

7. Koh X, Srinivasan B, Ching HS, Levchenko A. A 3D Monte carlo analysis of the role of dyadic space geometry in spark generation. Biophys J. 2006 Mar;90(6):1999-2014.
Key words: cleft, intracellular, microdomain
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=16387773

8. Pan X, Ye P, Yuan DS, Wang X, Bader JS, Boeke JD. A DNA integrity network in the yeast Saccharomyces cerevisiae. Cell. 2006 Feb 14; [Epub ahead of print]
Key words: DNA, genomic stability, yeast
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=16487579

9. Sampathkumar SG, Li AV, Jones MB, Sun Z, Yarema KJ. Metabolic installation of thiols into sialic acid modulates adhesion and stem cell biology.
Nat Chem Biol. 2006 Mar;2(3):149-52. Epub 2006 Feb 12.
Key words: metabolic, cell
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=16474386

10. White AR, Ryoo S, Li D, Champion HC, Steppan J, Wang D, Nyhan D, Shoukas AA, Hare JM, Berkowitz DE. Knockdown of arginase I restores NO signaling in the vasculature of old rats. Hypertension. 2006 Feb;47(2):245-51. Epub 2005 Dec 27.
Key words: argenase, vascular, rat, aortic rings
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=16380531

1. Bursac N, Tung L. Acceleartion of functional reentry by rapid pacing in anisotropic cardiac monolayers: formation of multi-wave functional reentries. Cardiovasc Res 2005 Nov 4. [Epub ahead of print]
Key words: cardiac electrophysiology; optical mapping; cell culture; functional reentry; rate acceleration
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6T14-4HH81P1-
1&_coverDate=11%2F07%2F2005&_alid=345699808&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=4880&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=8fc80a670f1907c7297753d19db93637

2. Campbell CT, Yarema KJ. Large-scale approaches for glycobiology. Genome Biol 2005;6(11):236.
Key words: glycobiology
http://genomebiology.com/content/pdf/gb-2005-6-11-236.pdf

3. Cheong R, Bermann A, Werner SL, Regal J, Hoffmann A, Levchenko A. Transient IKK activity mediates NF-kappa B temporal dynamics in response to a wide range of TNFalpha doses. J Biol Chem 2005 Dec 1. [Epub ahead of print]
Key words: IKK activity, NF-kappa B, TNF-alpha
http://www.jbc.org/cgi/reprint/M510085200v1

4. Geocadin RG, Malhotra AD, Tong S, Seth A, Moriwaki G, Hanley DF, Thakor NV. Effect of acute hypoxic preconditioning on aEEG and functional recovery after cardiac arrest in rats. Brain Res 2005 Nov 10. [Epub ahead of print]
Key words: global cerebral ischemia; asphyxia; rapid neuronal preconditioning; EEG; entropy; cardiac arrest
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6SYR-4HJ480M-
1&_coverDate=12%2F07%2F2005&_alid=345698665&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=4841&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=f3d6c75a20d2bb81ed59aa7b267966aa

5. Krakauer JW, Shadmehr R. Consolidation of motor memory. Trends Neurosci 2005 Nov 10. [Epub ahead of print]
Key words: motor memory, memory retrieval, cerebellar circuitry
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6T0V-4HJRRK1-
1&_coverDate=11%2F14%2F2005&_alid=345697036&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=4872&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=ad931e4be157aa4628f96f774486d92a

6. Luong-Van E, Grondahl L, Chua KN, Leong KW, Nurcombe V, Cool SM. Controlled release of heparin from poly(epsilon-caprolactone) electrospun fibers. Biomaterials 2005 Nov 20. [Epub ahead of print]
Key words: polycaprolactone; electrospinning; drug release; heparin; pro-inflammatory response; vascular smooth muscle cells
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TWB-4HM87FF-
1&_coverDate=03%2F31%2F2006&_alid=345375011&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=5558&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=7e490875bbb68bb2e4168b454f73bf5e

7. Murdock DR, Ermilov SA, Spector AA, Popel AS, Brownell WE, Anvari B. Effects of chlorpromazine on mechanical properties of the outer hair cell plasma membrane. Biophys J 2005 Dec;89(6):4090-5.
Key words: chlorpromazine, hair cell plasma membrane
http://www.biophysj.org/cgi/content/full/89/6/4090

8. Ooi SL, Pan X, Peyser BD, Ye P, Meluh PB, Yuan DS, Irizarry RA, Bader JS, Spencer FA, Boeke JD. Global synthetic-lethality analysis and yeast functional profiling. Trends Genet 2005 Nov 22. [Epub ahead of print]
Key words: yeast knockout mutants, synthetic-lethality screens
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TCY-4HMNFSJ-
3&_coverDate=11%2F23%2F2005&_alid=345370260&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=5183&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=fe3299476058a93ecc2ca9ae14873502

9. Pistorio AL, Hendry SH, Wang X. A modified technique for high-resolution staining of myelin. J Neurosci Methods 2005 Nov 22. [Epub ahead of print].
Key words: gallyas; silver; cerebral cortex; marmoset; macaque; demyelination; auditory cortex; medial geniculate; primate; multiple sclerosis; luxol fast blue; darkfield; myelin basic protein; visual cortex; blobs
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6T04-4HNS64X-
1&_coverDate=11%2F28%2F2005&_alid=345703765&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=4852&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=aee1e2def053638b6b28235bc7d9edbe

10. Qi Y, Ye P, Bader JS. Genetic interaction motif finding by expectation maximization-a novel statistical model for inferring gene modules from synthetic lethality. BMC Bioinformatics 2005 Dec6;6(1):288. [Epub ahead of print]
Key words: synthetic lethality, gene modules, statistics, expectation maximization
http://www.biomedcentral.com/1471-2105/6/288

11. Wu D, Liu Y, Jiang X, Chen L, He C, Goh SH, Leong KW. Evaluation of byperbranced poly(amino ester)s of amine constitutions similar to polyethylenimine for DNA delivery. Biomacromolecules 2005 Nov-Dec:6(6):3166-73.
Key words: DNA, polyethylenimine, amine
http://pubs.acs.org/cgi-bin/article.cgi/bomaf6/2005/6/i06/html/bm0504983.html

12. Ye P, Peyser BD, Spencer FA, Bader JS. Commensurate distances and similar motifs in genetic congruence and protein interaction networks in yeast. BMC Bioinformatics 2005 Nov 9;6(1):270 [Epub ahead of print]
Key words: genetic congruence, yeast, protein interaction
http://www.biomedcentral.com/1471-2105/6/270

13. Young ED, Calhoun BM. Nonlinear modeling of auditory-nerve rate responses to wideband stimuli. J Neurophysiol 2005 Dec;94(6):4441-54.
Key words: auditory nerve, nonlinear modeling, wideband stimuli
http://jn.physiology.org/cgi/content/full/94/6/444

1. Bursac N, Tung L. Acceleration of functional reentry by rapid pacing in anisotropic cardiac monolayers: formation of mulit-wave functional reentries. Cardiovasc Res 2005 Nov 4. [Epub ahead of print].
Key words: cardiac electrophysiology, optical mapping, cell culture, functional reentry, rate acceleration
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6T14-4HH81P1-
1&_coverDate=11%2F07%2F2005&_alid=335412700&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=4880&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=5cfc7e6a39d97aa8cbe7430b6c2f3732

2. Diedrichsen J, Hashambhoy Y, Rane T, Shadmehr R. Neural correlates of reach errors. J Neurosci 2005 Oct 26:25(43):9919-31.
Key words: fMRI, visual rotation, target jump, target errors, execution errors, force field, internal models, motor learning
http://www.jneurosci.org/cgi/content/full/25/43/9919

3. DiMattina C, Wang X. Virtual vocalization stimuli for investigating neural representations of species-specific vocalizations. J Neurophysiol 2005 Oct 5. [Epub ahead of print].
Key words: vocalization stimuli, neural
http://jn.physiology.org/cgi/reprint/00818.2005v1

4. Gao Z, Xu H, Disilvestre D, Halperin VL, Tunin R, Tian Y, Yu W, Winslow RL, Tomaselli GF. Transcriptomic profiling of the canine trachycardia-induced heart failure model: global comparison to human and murine heart failure. J Mol Cell Cardiol 2005 Oct 14. [Epub ahead of print].
Key words: gene expression, microarray, cardiomyopathy, transcriptome, Tachycardia-induced heart failure, RT-PCR, gene ontology, remodeling, pacing
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WK6-4HBSH7X-
3&_coverDate=10%2F17%2F2005&_alid=335415455&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=6898&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=661c6d0bcd66972c3fab54eb54dfde85

5. Greenstein JL, Hinch R, Winslow RL. Mechanisms of excitation-contraction coupling in an integrative model of the cardiac ventricular myocyte. Biophys J. 2005 Oct 7. [Epub ahead of print].
Key words: excitation-contraction coupling, cardiac myocyte, Ca2+ transient, action potential, local control, multi-scale model
http://www.biophysj.org/cgi/rapidpdf/biophysj.105.065169v1

6. Liao Z, Popel AS, Brownell WE, Spector AA. High-frequency force generation in the constrained cochlear outer hair cell: a model study. J Assoc Res Otolaryngol 2005 Oct 20;1-12.
Key words: mathematical model, electromotility, active force, piezoelectric
http://www.springerlink.com/(gm01zt45ttpnpnyyiavj5l45)/app/home/contribution.asp?
referrer=parent&backto=issue,6,20;journal,1,20;linkingpublicationresults,1:104922,1

7. Mac Gabhann F, Yang MT, Popel AS. Monte Carlo simulations of VEGF binding to cell surface receptors in vitro. Biochim Biophys Acta 2005 Oct 5. [Epub ahead of print].
Key words: vascular endothelial growth factor, angiogenesis, stochastic model; continuum approximation, mathematical model, Ligand-receptor binding
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6T20-4H88304-
1&_coverDate=10%2F05%2F2005&_alid=335407650&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=4904&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=537244c59e6afddc6282e3cdfa545348

8. Mao HQ, Leong KW. Design of polyphosphoester-DNA nanoparticles for non-viral gene delivery. Adv Genet 2005;53PA:275-306.
Key words: polyphosphoester-DNA nanoparticles, non-viral, gene delivery
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B7CT7-4HC85HD-
C&_coverDate=12%2F31%2F2005&_alid=335404697&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=18043&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=0cdce3d2636d95933f7dea836eb083f5

9. Prill RJ, Iglesias PA, Levchenko A. Dynamic properties of network motifs contribute to biological network organizations. PLoS Biol 2005 Oct 4;2(11):e343.
Key words: networks, biology
http://biology.plosjournals.org/perlserv/?request=get-document&doi=
10.1371/journal.pbio.0030343

10. Ramaswamy S, Wang DA, Fishbein KW, Elisseeff JH, Spencer RG. An analysis of the integration between articular cartilage and nondegradable hydrogel using magnetic resonance imaging. J Biomed Mater Res B Appl Biomater Oct 5. [Epub ahead of print].
Key words: magnetic resonance imaging (MRI), hydrogel, cartilage, integration, transverse relaxation time (T2)
http://www3.interscience.wiley.com/cgi-bin/abstract/112099861/ABSTRACT

11. Schramm LP. Spinal sympathetic interneurons: their identification and roles after spinal cord injury. Prog Brain Res 2005;152:27-37.
Key words: spine, sympathetic interneurons, spinal cord injury
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B7CV6-4H6RD7F-
8&_user=75682&_coverDate=12%2F31%2F2005&_alid=335410103&_rdoc=
1&_fmt=summary&_orig=search&_qd=1&_cdi=18070&_sort=d&_docanchor=
&view=c&_acct=C000006078&_version=1&_urlVersion=0&_userid=75682&md5
=e46904af24aa122c62b2b825c78dde7f

12. Takahashi SX, Miriyala J, Tay LH, Yue DT, Colecraft HM. The CaVbeta SH3/guanylate kinase domain interaction regulates multiple properties of voltage-gated Ca2+ channels. J Fen Physiol 2005 Oct;126(4):365-77.
Key words: CaVbeta SH3/guanylate kinase, voltage-gated Ca2+ channels
http://www.jgp.org/cgi/content/full/126/4/365

13. Yim EK, Loeng KW. Proliferation and differentiation of human embryonic germ cell derivatives in bioactive polymeric fibrous scaffold. J Biomater Sci Polym Ed 2005;16(10):1193-217.
Key words: three-dimensional culture, fibrous scaffold, surface modification, cell proliferation, differentiation, stem cell, nerve growth factor
http://www.ingentaconnect.com/content/vsp/bsp/2005/00000016/00000010/art00001
?token=00651c599565f006d9a92f3f3b3b6a332b25757d5c4f6d2922346b62687b7
6504c487667707049766c4273384d55ac8263472

1. Cai Y, Qiu Y, Wei L, Zhang W, Hu S, Smith PR, Crabtree VP, Tong S, Thakor NV, Zhu Y. Complex character analysis of heart rate variability following brain asphyxia. Med Eng Phys 2005 Aug 26;[Epub ahead of print].
Key words: brain asphyxia, heart rate variability, renyi entropy, L-Z complexity
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6T9K-4H0BT73-
1&_coverDate=08%2F29%2F2005&_alid=314910719&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=5117&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=6fa33a73a3b0ed235596142f9dffd150

2. Dalton S, Takahashi SX, Miriyala J, Colecraft HM. A single CaV{beta} can reconstitute both trafficking and macroscopic conductance of voltage-dependent calcium channels. J Physiol 2005 July 14; {Epub ahead of print]
Key words: calcium channels, CaV{beta}
http://jp.physoc.org/cgi/content/full/567/3/757

3. Dang JM, Sun DD, Shin-Ya Y, Sieber AN, Kostuik JP, Leong KW. Temperature-responsive hydroxybutyl chitosan for the culture of mesenchymal stem cells and intervertebral disk cells. Biomaterials 2005 Aug 19; [Epub ahead of print].
Key words: chitin/chitosan, thermally responsive material, hydrogel, mesenchymal stem cells, intervertebral disk.
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TWB-4GXVG8Y-
5&_coverDate=08%2F22%2F2005&_alid=314907270&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=5558&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=7355fe3f9a375c7aabfce4f840fba34e

4. Hwang NS, Kim MS, Sampattavanich S, Baek JH, Zhang Z, Elisseeff J. The effects of three dimensional culture and growth factors on the chondrogenic differentiation of murine embryonic stem cells. Stem Cells 2005 Aug 18; [Epub ahead of print].
Key words: stem cells, murine, culture, growth factors, chondrogenic differentiation
http://stemcells.alphamedpress.org/cgi/reprint/2005-0024v1.pdf

5. Jung AS, Harrison R, Lee KH, Genut J, Nyhan D, Brooks-Asplund EM, Shoukas AA, Hare JM, Berkowitz DE. Simulated microgravity produces attenuated baroreflex-mediated pressor, chronotropic, and inotropic responses in mice. Am J Physiol Heart Circ Physiol 2005 Aug;289(2):H600-7.
Key words: hindlimb unweighting, microgravity, baroreflex, orthostatic hypotension, mouse, cardiovascular deconditioning
http://ajpheart.physiology.org/cgi/content/full/289/2/H600

6. Li Q, Wang J, Shahani S, Sun DD, Sharma B, Elisseeff JH, Leong KW. Biodegradable and photocrosslinkable polyphosphoester hydrogel. Biomaterials 2005 Aug 23 [Epub ahead of print].
Key words: polyphosphoester, photopolymerization, hydrogel, tissue engineering scaffold, osteogenesis
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TWB-4GY893G-
1&_coverDate=08%2F24%2F2005&_alid=314898906&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=5558&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=3498ad05b190edf71f3c1d2d2af63466

7. Miller CT, Wang X. Sensory-motor interactions modulate a primate vocal behavior: antiphonal calling in common marmosets. J Comp Physiol A Neuroethol Sens Neural Behav Physiol 2005 Aug 31;1-12.
Key words:antiphonal calling, common marmoset, neuroethology, animal communication, sensory motor
PMID: 16133500
http://www.springerlink.com/app/home/contribution.asp?wasp=9e9d09bb458d41e
6a5f2362eef69be1a&referrer=parent&backto=issue,4,29;journal,1,104;
linkingpublicationresults,1:100424,1

8. Spector AA, Popel AS, Eatock RA, Brownell WE. Mechanosensitive channels in the lateral wall can enhance the cochlear outer hair cell frequency response. Ann Biomed Eng 2005 Aug;33(8):991-1002.
Key words: strain rate, viscoelasticity, piezoelectric effect, membrane potential, electromotility, active hearing
PMID: 16133908
http://www.springerlink.com/app/home/contribution.asp?wasp=f81064655be34996910
fd2c8ee71045a&referrer=parent&backto=issue,3,18;journal,2,77;
linkingpublicationresults,1:111241,1

9. Tan AC, Naiman DQ, Xu L, Winslow RL, Geman D. Simple decision rules for classifying human cancers from gene expression profiles. Bioinformatics 2005 Aug 16; [Epub ahead of print].
Key words: cancers, gene expression
http://bioinformatics.oxfordjournals.org/cgi/reprint/bti631v1

10. Xu L, Tan AC, Naiman DQ, Geman D, Winslow RL. Robust prostate cancer marker genes emerge from direct integration of inter-study microarray data. Bioinformatics 2005 Aug 30; [Epub ahead of print].
Key words: prostate cancer, marker genes, microarray
http://bioinformatics.oxfordjournals.org/cgi/reprint/bti647v1

1. Chase SM, Young ED. Limited segregation of different types of sound localization information among classes of units in the inferior colliculus. J Neurosci 2005 Aug 17;25(33):7575-85.
Key words: information theory, inferior colliculus, sound localization, spectral notch, ILD, ITD
http://www.jneurosci.org/cgi/content/full/25/33/7575

2. Chew SY, Wen J, Yim EK, Leong KW. Sustained release of proteins from electrospun biodegradable fibers. Biomacromolecules 2005 Jul-Aug;6(4):2017-24.
Key words: proteins, biodegradable fibers
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=16004440

3. Elisseeff J, Puleo C, Yang F, Sharma B. Advances in skeletal tissue engineering with hydrogels. Orthod Craniofac Res 2005 Aug;8(3):150-61.
Key words: hydrogels, stem cells, tissue engineering
http://www.blackwell-synergy.com/doi/abs/10.1111/j.1601-6343.2005.00335.x

4. Helm P, Beg MF, Miller MI, Winslow RL. Measuring and mapping cardiac fiber and laminar architecture using diffusion tensor MR imaging. Ann N Y Acad Sci 2005 Jun;1047:296-307.
Key words: computational modeling, fiber orientation, MRI, sheet orientation, ventricular anatomy
http://www.annalsnyas.org/cgi/content/full/1047/1/296

5. Jung AS, Harrison R, Lee KH, Genut J, Nyhan D, Brooks-Asplund EM, Shoukas AA, Hare JM, Berkowitz DE. Simulated microgravity produces attenuated baroreflex-mediated pressor, chronotropic, and inotropic responses in mice. Am J Physiol Heart Circ Physiol 2005 Aug;289(2):H600-7.
Key words: hindlimb unweighting, microgravity, baroreflex, orthostatic hypotension, mouse, cardiovascular deconditioning
http://ajpheart.physiology.org/cgi/content/full/289/2/H600

6. Karagiannis ED, Popel AS. Distinct modes of collagen type I proteolysis by matrix metalloproteinase (MMP) 2 and membrane type I MMP during the migration of a tip endothelial cell; Insights from a computational model. J Theor Biol 2005 Jul5;[Epub ahead of print]
Key words: angiogenesis, tissue inhibitor of metalloproteinase 2, Mmps, Type I collagen, extracellular matrix, theoretical model, mathematical model
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WMD-4GJVBHT-
2&_coverDate=07%2F06%2F2005&_alid=306173170&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=6932&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=edd0b31e1228b6fd2dfa3b675a034798

7. Lau W, Tong S, Thakor NV. Spatiotemporal characteristics of low-frequency functional activation measured by laser speckle imaging. IEEE Trans Neural Syst Rehabil Eng 2005 Jun;13(2):179-85.
Key words: Cerebral blood flow (CBF), functional imaging, laser speckle imaging (LSI), neuronal activity, whisker barrel field, whisker stimulation
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=16003897

8. Liao PT, Yong TF, Liang MC, Yue DT, Soong TW. Splicing for alternative structures of Ca(v)1.2 Ca(2+) channels in cardiac smooth muscles. Cardiovasc Res 2005 Jul 26; [Epub ahead of print].
Key words: alternative splicing, calcium channel, cardiovascular
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6T14-4GR8N6J-
2&_coverDate=07%2F27%2F2005&_alid=306174597&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=4880&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=db7c3fd806e60298ca87718da93d37e4

9. Moraru L, Tong S, Malhotra A, Geocadin R, Thakor N, Bezerianos A. Investigation of the effects of ischemic preconditioning on the HRV response to transient ischemia using linear and nonlinear methods. Med Eng Phys 2005 Jul;27(6):465-73.
Key words: transient global ischemia, asphyxia, preconditioning, hear rate variability
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6T9K-4FN4VWF-
1&_coverDate=07%2F31%2F2005&_alid=306173433&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=5117&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=d161a5fdc96a4140bbbc608963584928

10. Wang Y, Xiao R, Yang F, Karim BO, Iacovelli AJ, Cai J, Lerner CP, Richtsmeier JT, Leszl JM, Hill CA, Yu K, Ornitz DM, Elisseeff J, Huso DL, Jabs EW. Abnormalities in cartilage and bone development in the Apert syndrome FGFR2+/S252W mouse. Development 2005 Aug;132(15):3537-48.
Key words: apert syndrome, fibroblast growth factor receptor 2, mouse, cartilage, bone, mesenchyme, neural crest, skull, suture, craniosyntosis
http://dev.biologists.org/cgi/content/full/132/15/3537

1. Abraham MR, Henrikson CA, Tung L, Chang MG, Aon M, Xue T, Li RA, O'Rourke B, Marban E. Antiarrhythmic engineering of skeletal myoblasts for cardiac transplantation. Circ Res 2005 Jun 23; [Epub ahead of print].
Key words: antiarrhythmic, skeletal myoblasts, cardiac transplantation
http://circres.ahajournals.org/cgi/reprint/01.RES.0000174794.22491.a0v1

2. Agler HL, Evans J, Tay LH, Anderson MJ, Colecraft HM, Yue DT. G protein-gated inhibitory module of N-type (ca(v)2.2) ca(2+) channels. Neuron 2005 Jun 16:46(6):891-904.
Key words: G protein, N-type ca channels
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WSS-
4GDB6HB-&_coverDate=06%2F16%2F2005&_alid=294768510&_rdoc=
1&_fmt=&_orig=search&_qd=1&_cdi=7054&_sort=d&view=c&_acct=
C000006078&_version=1&_urlVersion=0&_userid=75682&md5=
b4e41afa91c9ad15e7cc7385036b6008

3. Barta P, Miller MI, Qiu A. A stochastic model for studying the laminar structure of cortex from MRI. IEEE Trans Med Imaging 2005 Jun:24(6):728-42.
Key words: stochastic, cortex, MRI
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15957597

4. Bartlett EL, Wang X. Long-lasting modulation by stimulus context in primate auditory cortex. J Neurophysiol 2005 Jul;94(1):83-104.
Key words: primary auditory cortex, modulation, stimulus
http://jn.physiology.org/cgi/content/full/94/1/83

5. Diedrichsen J, Shadmehr R. Detecting and adjusting for artifacts in fMRI time series data. Neuroimage 2005 Jun 20; [Epub ahead of print].
Key words: restricted maximum likelihood, functional MRI, noise, estimation, weighted least squares
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WNP-4GFNG3P-
1&_coverDate=06%2F21%2F2005&_alid=294811995&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=6968&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=32e5c38ae455ad32d3f6fbff2b698f06


6. Levchenko A. Proteomics takes stem cell analyses to another level. Nat Biotechnol 2005 Jul;23(7):828-30.
Key words: proteomics, stem cell
http://www.nature.com/nbt/journal/v23/n7/abs/nbt0705-828.html

7. Liu Y, Wu DC, Zhang WD, Jiang , He CB, Chung TS, Goh SH, Leong KW. Polyethylenimine-grafted multiwalled carbon nanotubes for secure noncovalent immbolization and efficient delivery of DNA. Angew Chem Int Engl 2005 Jul 1; [Epub ahead of print].
Key words: amines, carbon nanotubes, DNA, gene technology, polymerization
http://www3.interscience.wiley.com/cgi-bin/abstract/110553325/ABSTRACT

8. Miller MI, Beg MF, Ceritoglu C, Stark C. Increasing the power of functional maps of the medical temporal lobe by using large deformation diffeomorphic metric mapping. Proc Natl Acad Sci USA 2005 Jul 5;102(27):9685-90.
Key words: computational anatomy, functional MRI
http://www.pnas.org/cgi/content/full/102/27/9685

9. Zhang J, Miller MI, Planchez C, Richards LJ, Yarowsky P, van Zijl P, Mori S. Mapping postnatal mouse brain development with diffusion tensor microimaging. Neuroimage 2005 Jul 15;26(4):1042-51.
Key words: mouse brain development, diffusion tensor, microimaging, computational neuroanatomy
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WNP-4G0M3S9-
2&_coverDate=07%2F15%2F2005&_alid=294808063&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=6968&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=4722ec2069da514d7171f237c650c5da

1. Fang N, Tan WJ, Leong KW, Mao HQ, Chan V. pH responsive adhesion of phopholipid vesicle on poly(acrylic acid) cushion grafted to poly(ethylene terephthalate) surface. Colloids Surf B Biointerfaces 2005 May 25:42(3-4):245-52.
Key words: Phospholipid vesicle, Dipalmitoylphosphocholine, Poly(ethylene terephthalate)
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TFS-4G24XC1-
1&_coverDate=05%2F25%2F2005&_alid=286942398&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=5234&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=aed629f235906ce87fa1924d30b7b968

2. Heinz MG, Issa JB, Young ED. Auditory-nerve rate responses are inconsistent with common hypotheses for the neural correlates of loudness recruitment. J Assoc Res Otolaryngol 2005 Jun;6(2):91-105.
Key words: Auditory-nerve, loudness recruitment
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15952047

3. Kong CR, Bursac N, Tung L. Mechanoelectrical excitation by fluid jets in monolayers of cultured cardiac myocytes. J Appl Physiol 2005 Jun;98(6):2325-36.
Key words: mechanoelectrical coupling, ventricular arrhythmias, optical mapping, cell culture, neonatal rat
http://jap.physiology.org/cgi/content/full/98/6/2328

4. Liao IC, Wan AC, Yim EK, Leong KW. Controlled release from fibers of polyelectrolyte complexes. J Control Release 2005 May 18;104(2):347-58.
Key words: polyelectrolyte complex, fibers, chitosan, alginate, sustained release of growth factor
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6T3D-4FWKDMP-
1&_coverDate=05%2F18%2F2005&_alid=286940941&_rdoc=1&_fmt=&_orig=search
&_qd=1&_cdi=4944&_sort=d&view=c&_acct=C000006078&_version=1&_urlVersion=
0&_userid=75682&md5=b7d12679ca3b6537c0cd81e56930bdb9

5. Liao Z, Popel AS, Brownell WE, Spector AA. Modeling high-frequency electromotility of cochlear outer hair cell in microchamber experiment. J Acoust Soc Am 2005 Apr;117 (4 Pt 1):2147-57.
Key words: cochlear hair, high-frequency electromotility, microchamber
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15898656&query_hl=18


6. Wang X, Lu T, Snider RK, Liang L. Sustained firing in auditory cortex evoked by preferred stimuli. Nature 2005 May 19;435(7040):341-6.
Key words: Sustained firing, auditory cortex
http://www.nature.com/nature/journal/v435/n7040/abs/nature03565.html;jsessionid=
F8018BE29DC25F39D88EE0CCE04A1E5F



05/05

1. Bitouk D, Miller MI, Younes L. Clutter invariant ATR. IEEE Trans Pattern Annal Mach Intell 2005 May;27(5):817-21.
Key words: clutter, automated target recognition
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15875803

2. Huang H, Zhang J, Jiang H, Wakana S, Poetscher L, Miller MI, van Zijl PC, Hillis AE, Wytik R, Mori S. DTI tractography based parcellation of white matter: Application to the mid-sagittal morphology of corpus callosum. Neuroimage 2005 May 15;26(1):195-205.
Key words: DTI tractography, white matter, tract, parcellation, inner landmark corpus callosum morphology, stroke
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WNP-
4FM5D0N-&_coverDate=05%2F15%2F2005&_alid=275769109&_rdoc=1&_fmt=
&_orig=search&_qd=1&_cdi=6968&_sort=d&view=c&_acct=C000006078&_
version=1&_urlVersion=0&_userid=75682&md5=20787cef3b4b3f62ac951
eb99d22b64c

3. Winslow RL, Gao Z. Candidate gene discovery in cardiovascular disease. Circ Res 2005 Apr 1:96(6):605-6.
Key words: microarrays, gene expression
http://circres.ahajournals.org/cgi/content/full/96/6/605

4. Yang F, Williams CG, Wang DA, Lee H, Manson PN, Elisseeff J. The effect of incorporating RGD adhesive peptide in polyethylene glycol diacrylate hydrogel on osteogenesis of bone marrow stromal cells. Biomaterial 2005 May 3; [Epub ahead of print].
Key words: RGD, marrow stromal cells, osteogenesis, photopolymerizing, hydrogel
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15878198

1. Barken D, Wang CJ, Kearns J, Cheong R, Hoffman A, Levchenko A. Comment on oscillations in NF-kappaB signaling control the dynamics of gene expression. Science 2005 Apr 1;308(5718):52.
Key words: gene expression, NF-kappaB signaling
http://www.sciencemag.org/cgi/content/full/308/5718/52a

2. Chua KN, Lim WS, Zhang P, Lu H, Wen J, Ramakrishna S, Leong KW, Mao HQ. Stable immobilization of rat hepatocyte spheroids on galactosylated nanofiber scaffold. Biomaterials 2005 May;26(15):2537-47.
Key words: Cell morphology, electrospinning, function maintenance, galactosylated surface, hepatocyte, nanofiber scaffold, spheroid culture, surface grafting polymerization
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TWB-4DB58PV-
4&_coverDate=05%2F01%2F2005&_alid=263101266&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=5558&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=455686cdcb1eff19c46bf06fcbd38f67

3. Csernansky JG, Wang L, Swank J, Miller JP, Gado M, McKeel D, Miller MI, Morris JC. Preclinical detection of Alzheimer’s disease: hippocampal shape and volume predit dementia onset in the elderly. Neuroimage 2005 Apr 15;25(3):783-792.
Key words: Alzheimer's disease, DAT, Clinical Dementia Rating scale
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WNP-4FG4VB8-
4&_coverDate=04%2F15%2F2005&_alid=268170906&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=6968&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=c7ebfebce6a4cd05c02a6d994ea2c2b1

4. Jung AS, Harrison R, Lee KH, Banut J, Nyhan DM, Brooks-Asplund EA, Shoukas AA, Hare JM, Berkowitz DE. Simulated microgravity produces attenuated baroreflex-mediated pressor, chronotropic, and inotropic responses in mice. Am J Phyiol Heart Circ Physiol 2005 Mar 18; [Epub ahead of print]
Key words: hind-limb unweighting, microgravity, baroreflex, orthostatic hypotension, mouse, cardiovascular deconditioning
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15778286

5. Mao HQ, Shipanova-Kadiyala I, Zhao Z, Dang W, Brown A, Leong KW. Biodegradable poly(terephthalate-co-phosphate)s:synthesis, characterization and drug-release properties. J Biomater Sci Polym Ed 2005;16(2):135-61.
Key words: Poly(terephthalate-co-phosphate), Biodegradability, Polycondensation, Chain extension
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15794482

6. Monie D, Simmons RP, Nettles RE, Kieffer TL, Zhou Y, Zhang H, Karmon S, Ingersoll R, Chadwick K, Zhang H, Margolick JB, Quinn TC, Ray SC, Wind-Rotolo M, Miller M, Persaud D, Siliciano RF. A novel assay allows genotyping of the latent reservoir for human immunodeficiency virus type 1 in the resting CD4+ T Cells of viremic patients. J Virol 2005 Apr;79(8):5185-202.
Key words: genotyping, HIV, t-cells
http://jvi.asm.org/cgi/content/full/79/8/5185?view=long&pmid=15795302

7. Reiss LA, Young ED. Spectral edge sensitivity in neural circuits of the dorsal cochlear nucleus. J Neurosci 2005 Apr 6;25(14):3680-91.
Key words: dorsal cochlear nucleus; spectral edges; spectral notches; sound localization; head-related transfer functions; DCN
http://www.jneurosci.org/cgi/content/full/25/14/3680

8. Reyes JM, Herretes S, Pirouzmanesh A, Wang DA, Elisseeff JH, Jun A, McDonnell PJ, Chuck RS, Behrens A. A modified chondroitin sulfate aldehyde adhesive for sealing corneal incisions. Invest Ophthalmol Vis Sci 2005 Apr;46(4):1247-50.
Key words: chondroitin sulfate aldehyde, adhesive, cornea
http://www.iovs.org/cgi/content/full/46/4/1247

9. Sharma V, Susil RC, Tung L. Paradoxical loss of excitation with high intensity pulses during electric field stimulation of single cardiac cells. Biophys J 2005 Apr;88(4):3038-49.
Key words: excitation, cardiac cells
http://www.biophysj.org/cgi/content/full/88/4/3038

10. Winslow RL, Gao Z. Candidate gene discovery in cardiovascular disease. Circ Res 2005 Apr 1;96(6):605-6.
Key words: microarrays, gene expression
http://circres.ahajournals.org/cgi/content/full/96/6/605

11. Yim EK, Reano RM, Pag SW, Yee AF, Chen CS, Leong KW. Nanopattern-induced changes in morphology and motility of smooth muscle cells. Biomaterials 2005 Sep; 26(26):5405-13.
Key words: nanotopography, smooth muscle cells, bionanotechnology, nanoimprinting, nanomedicine cell-substrate interaction
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TWB-4FPF05T-
1&_coverDate=09%2F30%2F2005&_alid=267118221&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=5558&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=c4aabe4ef9ac6dc62bd3d8d04894d14c

1. Chen HH, LE Visage C, Qiu B, Du X, Ouwerkerk R, Leong KW, Yang X. MR imaging of biodegradable polymeric microparticles: A potential method of monitoring local drug delivery. Magn Reson Med 2005 Feb 18;53(3):614-620. [Epub ahead of print]
Key words: bioadhesive, biodegradable polymers, microparticles, drug delivery, gadolinium

http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15723408

2. Dordevic GS, Rasic M, Shadmehr R. Parameteric models for motion planning and control in biomimetic robotics. IEEE Transaction in Robotics 21:80-92.
Key words: running robots, walking robots
http://www.bme.jhu.edu/~reza/Reprints/ieee_05.pdf

3. Ganesan AN, O'Rourke B, Maack C, Colecraft H, Sidor A, Johns DC. Reverse engineering the L-type Ca(2+) channel alpha(1c) subunit in adult cardiac myocytes using novel adenoviral vectors. Biocehm Biophys Res Commun 2005 Apr 8;329(2):749-54.
Key words: Dihydropyridine, Excitation-contraction coupling; Gene transfer; Adenovirus; Ion channel
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WBK-4FG4835-
1&_coverDate=04%2F08%2F2005&_alid=253005101&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=6713&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=36bda9eb136f9676038d03932450cf8b

4. Kim S, Popel AS, Intaglietta M, Johnson PC. Aggregate formation of erythrocytes in postcapillary venules. Am J Physiol Heart Circ Phiol 2005 Feb;288(2):H584-90. Epub 2004 Sep 30.
Key words: hemodynamics; in vivo blood rheology; in vivo microscopy
http://ajpheart.physiology.org/cgi/content/full/288/2/H584

5. Kong CR, Bursac N, Tung L. Mechanoelectrical excitation by fluid jets in monolayers of cultured cardiac myocytes. J Appl Phyiol 2005 Feb 24; [Epub ahead of print].
Key words: mechanoelectrical coupling, ventricular arrhythmias, optical mapping, cell cuture, neonatal rat
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15731396

6. Levchenko A, Mehta BM, Niu X, Kang G, Villafania L, Way D, Polycarpe D, Sadelain M, Larson SM. Intercellular transfer of P-glycoprotein mediates acquired multidrug resistance in tumor cells. Proc Natl Acad Sci USA 2005 Feb 8;102(6):1933-8. Epub 2005 Jan 25.
Key words: cell-cell communication, multidrug resistance phenotype
http://www.pnas.org/cgi/content/full/102/6/1933

7. Mac Gabhann F, Popel AS. Differential binding of VEGF isoforms to VEGF Receptor 2 in the presence of Neuropilin-1: a computational model. Am J Physiol Heart Circ Physiol 2005 Feb 11; [Epub ahead of print]
Key words: mathematical model, receptor coupling, angiogenesis, endothelial cell
http://ajpheart.physiology.org/cgi/reprint/01218.2004v1

8. Popel AS, Johnson PC. Microcirculation and hemorheology. Ann. Rev. Fluid Mechanics 37:43-69, 2005.
Key words: blood flow, biofluidmechanics, cell mechanics, vascular regulation, computational model
http://www.bme.jhu.edu/~apopel/pub_files/Popel%20&%20Johnson%20
Annu%20Rev%20Fluid%20Mech%202005.pdf

9. Salama I, Hinderlich S, Shlomai Z, Eisenberg I, Krause S, Yarema K, Argov Z, Lochmuller H, Reutter W, Dabby R, Sadeh M, Ben-Bassat H, Mitrani-Rosenbaum S. No overall hyposialylation in hereditary inclusion body myopathy myoblasts carrying the homozygous M712T GNE mutation. Biochem Biophys Res Commun 2005 Mar 4;328(1):221-6.
Key words: Hereditary inclusion body myopathy; Muscle cells; GNE; UDP-N-acetylglucosamine 2-epimerase/N-acetylmannosamine kinase; Sialic acid; Sialylation
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6WBK-4F65H54-
F&_coverDate=03%2F04%2F2005&_alid=250192147&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=6713&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=9d727724aa57280979113b66ee697267

10. Sampathkumar SG, Yarema KJ. Targeting cancer cells with dendrimers. Chem Biol 2005 Jan;12(1):5-6.
Key words: cancer, dendrimers
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15664507

11. Wang DA, Williams CG, Yang F, Cher N, Lee H, Elisseeff JH. Bioresponsive phosphoester hydrogels for bone tissue engineering. Tissue Eng 2005 Jan-Feb;11(1-2):201-13.
Key words: phosphoester, hydrogels, bone tissue
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15738675

12. Winslow RL, Cortassa S, Greenstein JL. Using models of the myocyte for functional interpretation of cardiac proteomic data. J Phiol. 2005 Feb 15:563 (Pt1):73-81. Epub 2004 Dec 20.
Key words: myocyte, proteomics, cardiac
http://jp.physoc.org/cgi/content/full/563/1/73

13. Zhang J, Chen YB, Hardwick JM, Miller MI, Plachez C, Richards LJ, Yarowsky P, van Zijl P, Mori S. Magnetic resonance diffusion tensor microimaging reveals a role for Bcl-x in brain development and homeostatis. J Neurocience 2005 Feb 23;25(8):1881-8.
Key words: magnetic, resonance, diffusion, cortex, axon, development, phenotype
http://www.jneurosci.org/cgi/content/full/25/8/1881

1. Csernansky JG, Wang L, Swank JS, Miller JP, Gado MH, McKeel DW, Miller MI, Morris JC. Preclinical detection of Alzheimer’s Disease: hippocampal shape and volume predicts dementia onset in the elderly, NeuroImage 2005, (in press).
Key words: Alzheimer's Disease, hippocamp, dementia onset, elderly

2. Eliades, SJ, Wang X. Dynamics of auditory-vocal interaction in monkey auditory cortex. Cereb Cortex 2005.
Key words: feedback, marmoset, sensory-motor interaction, vocalization, vocal production

3. Elisseeff J. Injectable cartilage tissue engineering. Expert Opin Biol Ther 2004 Dec;4(12):1849-59.
Key words: cartilage tissue
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15571448

4. Kim MS, Hwang NS, Lee J, Kim TK, Leong K, Shamblott MJ, Gearhart J, Elisseeff J. Musculoskeletal differentiation of cells derived from human embryonic germ cells. Stem Cells 2005;23(1):113-23.
Key words: Pluripotent stem cells · Embryoid bodies · EG cells · Differentiation
http://stemcells.alphamedpress.org/cgi/content/full/23/1/113

5. Sharma V, Susil R, Tung L. Paradoxical loss of excitation with high intensity pulses during electric field stimulation of single cardiac cells. Biophys J 2005 Jan 21.
Key words:cellular electrophysiology, membrane potential, optical montoring
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=Abstract&list_uids=15665123

6. Smith, MA, Shadmehr, R. Intact ability to learn internal models of arm dynamics in Huntington's Disease but not cerebellar degeneration. J Neurophysiol 2004 Dec 29; [Epub ahead of print].
Key words: Motor learning, reaching movements, cerebellum, basal ganglia, state-space models, error correction, motor control
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15625094

7. Tan WJ, Teo GP, Liao K, Leong KW, Mao HQ, Chan V. Adhesion contact dynamics of primary hepatocytes of poly (ethylene terephthalate) surface. Biomaterials 2005 Mar;26(8):891-8.
Key words: Polyacrylic acid; Biophysics; Adhesion; Kinetics
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15353200

8. Vidal R, Shakernia O, Sastry S. Following the flock. IEEE Robotics and Automation Magazine 2004 Dec;11(4):14-20, December 2004.
Key words: formation control, visual serving, motion segmentation

9. Wainscott SK, Donchin O, Shadmehr R. Internal models and contextual cues: encoding serial order and direction of movement. J Neurophysiol 2005 Feb;93(2):786-800. Epub 2004 Sep 22.
Key words: Motor learning, reaching movements, cerebellum, basal ganglia, state-space models, error correction, motor control
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15385598

10. Williams CG, Malik AN, Tim TK, Manson PN, Elisseeff, JH. Vairiable cytocompatibility of six cell lines with photoinitiators used for polymerizing hydrogels and cell encapsulation. Biomaterials 2005 Apr;26(11):1211-8.
Key words: Photopolymerization; Cytotoxicity; Hydrogel; Cell encapsulation; Cell proliferation; Free radical
http://www.sciencedirect.com/science?_ob=ArticleURL&_udi=B6TWB-4CHRH1V-
4&_coverDate=04%2F30%2F2005&_alid=240976412&_rdoc=1&_fmt=&_orig=
search&_qd=1&_cdi=5558&_sort=d&view=c&_acct=C000006078&_version=
1&_urlVersion=0&_userid=75682&md5=eb474a69b634423c5cc3d8ebb394134b

11. Wan AC, Yim EK, Liao IC, Le Visage C, Leong KW. Encapsulation of biologics in self-assembled fibers as biostructural units for tissue engineering. J BIomed Mater Res 2004 Dec 15;71A(4):586-95.
Key words: assembly of biostructural units, protein encapsulation, ligand immobilization, cell encapsulation, water-soluble chitin-alginate fiber
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15499568

12. Zhang PC, Wang J, Leong KW, Mao HQ. Ternary complexes comprising polyphosphoramidate gene carriers with different types of charge groups improve transfection efficiency. Biomacromolecules 2005 Hab 10;6(1):54-60.
Key words: polyphosphoramidate gene carriers, transfection efficiency
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15638504

13. Zhang XQ, Wang XL, Huang SW, Zhuo RX, Liu ZL, Mao HQ, Leong KW. In Vitro gene delivery using polyamidoamine dendrimers with a trimesyl core. Biomacromolecules 2005 Jan 10;6(1):341-350.
Key words: In Vitro, polyamidoamine dendrimers, trimesyl core
http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?cmd=Retrieve&db=pubmed&dopt=
Abstract&list_uids=15638538

1. Csernansky JG, Schindler, MK, Reagan Splinter N, Wang L, Gado M, Selemon LD, Rastogi-Cruz D, Posener JA, Thompson PA, Miller MI. Abnormalities of thalmic volume and shape in schizophrenia Am J Psychiatry 2004;161:5
Key words: Abnormalities of Thalamic, Volume and Shape
http://linkinghub.elsevier.com/retrieve/pii/S0006322303007029
1. Girard KD, Chaney C, Delannoy M, Kuo SC, Robinson DN. Dynacortin contributes to cortical viscoelasticity and helps define the shape changes of cytokinesis. EMBO J. 2004;23:1536-1546.
Key words: cell morphology, cortical mechanics, cytokinesis, Dictyostelium, rheology
http://embojournal.npgjournals.com/cgi/content/abstract/sj.emboj.7600167v1

1. Citation: Anderson M J, Young E D. Isoflurane/N2O anesthesia suppresses narrowband but not wideband inhibition in dorsal cochlear nucleus. Hearing Res. 2004;188:29-41.
Key words: Isoflurane, dorsal cochlear nucleus, inhibition
http://www.ncbi.nlm.nih.gov:80/entrez/query.fcgi?cmd=Retrieve
&db=PubMed&list_uids=14759568&dopt=Abstract

2. Bandyopadhyay S, Young E D. Discrimination of voiced stop consonants based on auditory