| DNA Diagnostic Laboratory at Johns Hopkins | |
Choreoathetosis, Hypothyroidism, Neonatal Respiratory Distress |
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| Gene: | NKX2-1; chr14q13.3 | |
| Syndrome Information | ||
| Clinical Description: |
Choreoathetosis,
Hypothyroidism, and Neonatal Respiratory Distress (also known as
Brain-Lung-Thyroid Syndrome or sometimes TTF1-deficiency Syndrome in
older literature) involves (as originally characterized) the brain,
lungs, and thyroid to variable degrees.
All three organs do not need to be affected to consider the
diagnosis. Neurologic
symptoms include chorea, choreoathetosis, hypotonia and ataxia.
Developmental delays, both global and motor, and mental
retardation have also been reported.
Hypothyroidism (sometimes compensated and not overt; as measured
by elevated serum thyrotropin) is present in most patients, though the
size of the thyroid can be small to normal.
Thyroid agenesis has also been reported.
Lung disease manifests as neonatal respiratory distress that can
be fatal or recurrent pulmonary infections.
A significant number of surviving patients go on to develop
chronic interstitial lung disease. Though
lung disease is the most infrequent symptom, it accounts for significant
patient mortality.
In
one literature review, 50% of patients had brain, lung and thyroid
findings; 13% had benign chorea only, and 6% had thyroid and lung or
thyroid only symptoms. |
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| Inheritance Pattern: | Autosomal Dominant | |
| Genotype-Phenotype Correlation: | None known |
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| Test Information | ||
| Test Method: | Bidirectional sequencing of the coding regions and intron-exon boundaries of NKX2-1; Multiplex ligation-dependent probe amplification (MLPA) for gene deletions | |
| Clinical Utility: | Identification of causative mutations in known or highly suspicious cases of Choreoathetosis, Hypothyroidism, Neonatal Respiratory Distress; rule-out of inherited causes of severe respiratory distress and/or hypothyroidism; diagnostic or presymptomatic testing of at-risk relatives of a proband; predictive prenatal testing when familial mutation is known. | |
| Clinical Sensitivity: |
Of
56 patients included in two published series, 10 had NKX2-1
mutations (18%). Of the
identified mutations, two were gene deletions and 8 were point mutations
identifiable by gene sequencing. Sequencing
of the NKX2-1 gene is predicted to detect a mutation in approximately 14%
of symptomatic patients. MLPA
analysis is predicted to detect a mutation in approximately 4% of
patients.
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Analytic Sensitivity: |
Sequencing:
Greater
than 97% for nucleotides analyzed. All reports will indicate if
a certain percentage of nucleotides were not called or were analyzed
in a single direction.
MLPA: Analytical
sensitivity for deletions is estimated to be at least 90%. |
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| Sample Requirements: |
For tests utilizing MLPA, we are only able to
accept whole blood drawn in EDTA (purple or lavender top) tubes and Qiagen
Puregene extracted DNA. |
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| Turn Around Time: |
Sequencing: 3-4 weeks MLPA: up to 4 weeks |
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| Fee and CPT Codes: | Sequencing:
$882 for routine testing on a blood or DNA sample 83891 x 1 83898 x 7 83904 x 14 83909 x 14 83912 x 1 MLPA: $429 for routine testing on a blood
or DNA sample Please contact the lab to arrange testing for known mutations on blood or prenatal samples. |
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| Special Considerations | ||
| This test is offered as an automatic reflex to MLPA analysis if the sequencing assay does not detect a potential disease-causing mutation. NKX2-1 mutations are also associated with Benign Hereditary Chorea. | ||
| INFORMED CONSENT from the patient is required prior to ordering a genetic test. The DNA Diagnostic Lab's consent is located on the second page of the requisition form. There is also a patient brochure, "Things Every Patient Should Know Before Consenting to a Genetic Test", available for download. | ||
Helpful Links |
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| Sample Requirements Requisition and Billing forms Clinical information on Choreoathetosis, Hypothyroidism, Neonatal Respiratory Distress Link to the General Test Information page for a discussion of the uses and limitations of genetic testing Patient and Family Page for general resources on genetic testing. |
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